RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 LYPD6BQ8NI32 183 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 MYOZ3Q8TDC0 251 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 WIPF2Q8TF74 440 aaPredicted RBP6.86□□□□□ -1.31
SMC6-204ENST00000428868 EEF1AKMT3Q96AZ1 226 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 SAT2Q96F10 170 aaPredicted RBP6.86□□□□□ -1.31
SMC6-204ENST00000428868 TMPRSS5Q9H3S3 457 aa6.86□□□□□ -1.31
SMC6-204ENST00000428868 SEPSECSQ9HD40 501 aaKnown RBP6.86□□□□□ -1.31
SMC6-204ENST00000428868 TRAV5A0A0B4J249 113 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 CTXND1A0A1B0GTU2 59 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 MAP1LC3B2A6NCE7 125 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 SEC14L6B5MCN3 397 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 CYB5BO43169 146 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 TGOLN2O43493 480 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 TOMM40O96008 361 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 CLEC3BP05452 202 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 H2AFB1P0C5Y9 115 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 OR5G3P0C626 314 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 NPBWR1P48145 328 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 RAB5CP51148 216 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 LYZP61626 148 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 BLOC1S1P78537 153 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 SRSF3P84103 164 aaKnown RBP6.85□□□□□ -1.31
SMC6-204ENST00000428868 SCGB2A2Q13296 93 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 USF2Q15853 346 aaPredicted RBP6.85□□□□□ -1.31
SMC6-204ENST00000428868 DPPA3Q6W0C5 159 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 ZNF491Q8N8L2 437 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 OR51G1Q8NGK1 321 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 OR1B1Q8NGR6 318 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 LINC01006Q8NI28 216 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 GATAD1Q8WUU5 269 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 SFT2D1Q8WV19 159 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 MBD3L1Q8WWY6 194 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 RAB24Q969Q5 203 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 ZNF503Q96F45 646 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 SCRT1Q9BWW7 348 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 MAP1LC3BQ9GZQ8 125 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 TMEM231Q9H6L2 316 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 ZFAND3Q9H8U3 227 aa6.85□□□□□ -1.31
SMC6-204ENST00000428868 TRBV7-1A0A0A6YYK4 115 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 WI2-2373I1.2A0A1W2PRP0 233 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 BMPR1BO00238 502 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 TCF21O43680 179 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 COX7A2P2O60397 106 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 MBP02144 154 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 IL4P05112 153 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 ORM2P19652 201 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 YPEL3P61236 119 aaPredicted RBP6.84□□□□□ -1.31
SMC6-204ENST00000428868 SELENOTP62341 195 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 FOXE3Q13461 319 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 FAM78BQ5VT40 261 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 LEMD1Q68G75 181 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 ZNF343Q6P1L6 599 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 KLHDC1Q8N7A1 406 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 OR4X2Q8NGF9 303 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 SPATA3Q8NHX4 192 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 LRRC20Q8TCA0 184 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 FAM167A-AS1Q96KT0 104 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 TXN2Q99757 166 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 PBDC1Q9BVG4 233 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 SLC25A2Q9BXI2 301 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 ACTR3CQ9C0K3 210 aaPredicted RBP6.84□□□□□ -1.31
SMC6-204ENST00000428868 C16orf95Q9H693 158 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 KCNIP2Q9NS61 270 aa6.84□□□□□ -1.31
SMC6-204ENST00000428868 PUS1Q9Y606 427 aaKnown RBP eCLIP6.84□□□□□ -1.31
SMC6-204ENST00000428868 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.83□□□□□ -1.32
SMC6-204ENST00000428868 TMEM89A2RUT3 159 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 ZNF207O43670 478 aaKnown RBP6.83□□□□□ -1.32
SMC6-204ENST00000428868 ATP6V1G1O75348 118 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 ELANEP08246 267 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 SNRPCP09234 159 aaKnown RBP6.83□□□□□ -1.32
SMC6-204ENST00000428868 STAG3L2P0CL84 134 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 STAG3L3P0CL85 134 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 RD3LP0DJH9 198 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 ARL14EPLP0DKL9 152 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 EDN2P20800 178 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 ARL3P36405 182 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 PLP1P60201 277 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 KRTAP10-3P60369 221 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 SLC35B1P78383 322 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 C10orf113Q5VZT2 155 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 TEX38Q6PEX7 206 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 TOMM20LQ6UXN7 152 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 PRIMA1Q86XR5 153 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 RNF152Q8N8N0 203 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 C11orf44Q8N8P7 122 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 OR5AU1Q8NGC0 362 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 RNF125Q96EQ8 232 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 USMG5Q96IX5 58 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 DNAJC4Q9NNZ3 241 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 MED9Q9NWA0 146 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 FUT9Q9Y231 359 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 WNK1Q9H4A3 2382 aa6.83□□□□□ -1.32
SMC6-204ENST00000428868 IGHV4OR15-8A0A075B7B6 117 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 TRAV30A0A087WSZ9 112 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 A0A087WW49 117 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 CLPSL1A2RUU4 121 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 C9JQL5 133 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 H3BRN7 92 aa6.82□□□□□ -1.32
SMC6-204ENST00000428868 NUPL2O15504 423 aaKnown RBP6.82□□□□□ -1.32
SMC6-204ENST00000428868 HYPMO75409 117 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms