RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 C15orf32Q32M92 178 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 TCTEX1D4Q5JR98 221 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 SLC16A13Q7RTY0 426 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 PRIMA1Q86XR5 153 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 OR52E5Q8NH55 327 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 OR4A5Q8NH83 315 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 Q8WTZ3 238 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 PRDM13Q9H4Q3 707 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 FKBP11Q9NYL4 201 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 F11RQ9Y624 299 aaKnown RBP7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 IGHV3OR16-13A0A075B7E8 117 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 IGHV3-74A0A0B4J1X5 117 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 K7EIM0 57 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 CXCL1P09341 107 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 BCL2P10415 239 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 HILS1P60008 231 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 RHOGP84095 191 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 BSXQ3C1V8 233 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 KHDC1LQ5JSQ8 128 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 SSX7Q7RTT5 188 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 OR10P1Q8NGE3 313 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 WDR61Q9GZS3 305 aaKnown RBP7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 DOK5Q9P104 306 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 TIMM9Q9Y5J7 89 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 CLN5O75503 358 aa7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 HOXA5P20719 270 aa7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 PPIFP30405 207 aaKnown RBP7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 RPS10P46783 165 aaKnown RBP7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 PDLIM3Q53GG5 364 aaPredicted RBP7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 TMEM41BQ5BJD5 291 aa7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 TREML4Q6UXN2 200 aa7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 CENPVQ7Z7K6 275 aaPredicted RBP7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 OR5R1Q8NH85 324 aa7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 RCC1LQ96I51 464 aaKnown RBP7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 TMEM242Q9NWH2 141 aa7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 GNG13Q9P2W3 67 aa7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 FBXL7Q9UJT9 491 aa7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 MGAM2Q2M2H8 2515 aa7.4□□□□□ -1.22
HMGCLL1-206ENST00000428842 IGHV3-49A0A0A0MS15 119 aa7.4□□□□□ -1.23
HMGCLL1-206ENST00000428842 F8W735 103 aaPredicted RBP7.4□□□□□ -1.23
HMGCLL1-206ENST00000428842 ZNF207O43670 478 aaKnown RBP7.4□□□□□ -1.23
HMGCLL1-206ENST00000428842 TRGV3P03979 118 aa7.4□□□□□ -1.23
HMGCLL1-206ENST00000428842 CEBPGP53567 150 aa7.4□□□□□ -1.23
HMGCLL1-206ENST00000428842 TPPP2P59282 170 aa7.4□□□□□ -1.23
HMGCLL1-206ENST00000428842 BPIFB3P59826 476 aa7.4□□□□□ -1.23
HMGCLL1-206ENST00000428842 KRTAP10-3P60369 221 aa7.4□□□□□ -1.23
HMGCLL1-206ENST00000428842 PNRC1Q12796 327 aaPredicted RBP7.4□□□□□ -1.23
HMGCLL1-206ENST00000428842 ZNF343Q6P1L6 599 aa7.4□□□□□ -1.23
HMGCLL1-206ENST00000428842 LINC01006Q8NI28 216 aa7.4□□□□□ -1.23
HMGCLL1-206ENST00000428842 ZNF418Q8TF45 676 aaPredicted RBP7.4□□□□□ -1.23
HMGCLL1-206ENST00000428842 CHRDL1Q9BU40 450 aa7.4□□□□□ -1.23
HMGCLL1-206ENST00000428842 CMYA5Q8N3K9 4069 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 IGLV11-55A0A075B6I3 123 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 I3L2K1 104 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 FOSL1P15407 271 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 GPR183P32249 361 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 KIAA0141Q14154 515 aaPredicted RBP7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 MIC13Q5XKP0 118 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 CLEC19AQ6UXS0 136 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 UHRF2Q96PU4 802 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 TMPRSS5Q9H3S3 457 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 FGF7P21781 194 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 C19orf54Q5BKX5 351 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 MORN5Q5VZ52 161 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 LEMD1Q68G75 181 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 ACSM6Q6P461 480 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 LCN15Q6UWW0 184 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 CCDC140Q96MF4 163 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 MGST2Q99735 147 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 NPFFR1Q9GZQ6 430 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 OR51M1Q9H341 326 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 SDF2L1Q9HCN8 221 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 GSN-AS1Q9NRJ2 163 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 VAX2Q9UIW0 290 aa7.39□□□□□ -1.23
HMGCLL1-206ENST00000428842 IGKV1D-37A0A075B6S9 117 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 TGIF2-C20orf24A0A0A6YYL0 155 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 IGHV3-66A0A0C4DH42 116 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 ZFP92A6NM28 416 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 NDUFS6O75380 124 aaKnown RBP7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 CLEC3BP05452 202 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 FABP1P07148 127 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 CD28P10747 220 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 RAB11AP62491 216 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 ATP6V1FQ16864 119 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 TIGITQ495A1 244 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 C2orf83Q53S99 150 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 TTC9CQ8N5M4 171 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 OR1P1Q8NH06 330 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 CIB3Q96Q77 187 aaPredicted RBP7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 PRSS22Q9GZN4 317 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 GNB4Q9HAV0 340 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 NIT2Q9NQR4 276 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 MAP1LC3B2A6NCE7 125 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 IGF1P05019 195 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 CDX1P47902 265 aaPredicted RBP7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 FGF8P55075 233 aaPredicted RBP7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 CD69Q07108 199 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 ZNF674Q2M3X9 581 aa7.38□□□□□ -1.23
HMGCLL1-206ENST00000428842 KLHDC1Q8N7A1 406 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms