RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 PYYP10082 97 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 NMUP48645 174 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 CACNG7P62955 275 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 ATP5G2Q06055 141 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 KLRD1Q13241 179 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 SRSF6Q13247 344 aaKnown RBP13□□□□□ -0.33
C9orf3-206ENST00000428313 OR13A1Q8NGR1 328 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 ITLN1Q8WWA0 313 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 FXYD5Q96DB9 178 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 DAZAP1Q96EP5 407 aaKnown RBP13□□□□□ -0.33
C9orf3-206ENST00000428313 FMC1Q96HJ9 113 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 TM2D2Q9BX73 214 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 PSG8Q9UQ74 426 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 IGLL5B9A064 214 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 MOSP00540 346 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 C2orf83Q53S99 150 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 OR1L4Q8NGR5 311 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 DDB2Q92466 427 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 PRO0461Q9UI25 63 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 CHD7Q9P2D1 2997 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 A0A1B0GW15 77 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 SCRG1O75711 98 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 GNG5P63218 68 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 GAGE13Q4V321 117 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 MOB3BQ86TA1 216 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 OR9G1Q8NH87 305 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 ATP6V0E2Q8NHE4 81 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 ZNF414Q96IQ9 312 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 F11RQ9Y624 299 aaKnown RBP12.99□□□□□ -0.33
C9orf3-206ENST00000428313 ASXL3Q9C0F0 2248 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 SLC25A17O43808 307 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 CELA2AP08217 269 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 SPINK8P0C7L1 97 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 TM4SF20Q53R12 229 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 SLC25A48Q6ZT89 311 aaKnown RBP12.99□□□□□ -0.33
C9orf3-206ENST00000428313 SMRP1Q8NCR6 262 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 FAM234AQ9H0X4 552 aa12.99□□□□□ -0.33
C9orf3-206ENST00000428313 COX7A2P2O60397 106 aa12.98□□□□□ -0.33
C9orf3-206ENST00000428313 MT-CO3P00414 261 aa12.98□□□□□ -0.33
C9orf3-206ENST00000428313 SLC25A5P05141 298 aaKnown RBP12.98□□□□□ -0.33
C9orf3-206ENST00000428313 CRYGCP07315 174 aa12.98□□□□□ -0.33
C9orf3-206ENST00000428313 ACP1P24666 158 aa12.98□□□□□ -0.33
C9orf3-206ENST00000428313 PRCDQ00LT1 54 aa12.98□□□□□ -0.33
C9orf3-206ENST00000428313 SRSF1Q07955 248 aaKnown RBP eCLIP12.98□□□□□ -0.336e-7■■■□□ 17.9
C9orf3-206ENST00000428313 Q6ZS92 163 aa12.98□□□□□ -0.33
C9orf3-206ENST00000428313 FAM90A1Q86YD7 464 aa12.98□□□□□ -0.33
C9orf3-206ENST00000428313 RFESDQ8TAC1 157 aa12.98□□□□□ -0.33
C9orf3-206ENST00000428313 CHAC1Q9BUX1 264 aa12.98□□□□□ -0.33
C9orf3-206ENST00000428313 PRNDQ9UKY0 176 aa12.98□□□□□ -0.33
C9orf3-206ENST00000428313 IGHV1OR15-9A0A0B4J2B8 117 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 VSTM5A8MXK1 200 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 SHISA9B4DS77 424 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 K7ERJ3 54 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 SRYQ05066 204 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 C10orf113Q5VZT2 155 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 INO80CQ6PI98 192 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-206ENST00000428313 IFI27L2Q9H2X8 130 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 CDIP1Q9H305 208 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 A0A1B0GUT8 65 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 CD69Q07108 199 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 RIGQ13278 110 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 POU2AF1Q16633 256 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 PDPNQ86YL7 162 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 CEND1Q8N111 149 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 OR1L8Q8NGR8 309 aa12.97□□□□□ -0.33
C9orf3-206ENST00000428313 OVOL3O00110 214 aa12.96□□□□□ -0.33
C9orf3-206ENST00000428313 DLL1O00548 723 aa12.96□□□□□ -0.33
C9orf3-206ENST00000428313 RPL39P5Q59GN2 51 aa12.96□□□□□ -0.33
C9orf3-206ENST00000428313 C8orf46Q8TAG6 207 aa12.96□□□□□ -0.33
C9orf3-206ENST00000428313 CACNG8Q8WXS5 425 aa12.96□□□□□ -0.33
C9orf3-206ENST00000428313 NHP2Q9NX24 153 aaKnown RBP12.96□□□□□ -0.33
C9orf3-206ENST00000428313 H3BMG7 143 aa12.96□□□□□ -0.34
C9orf3-206ENST00000428313 NXPH1P58417 271 aa12.96□□□□□ -0.34
C9orf3-206ENST00000428313 CACNA1DQ01668 2161 aa12.96□□□□□ -0.34
C9orf3-206ENST00000428313 RNF183Q96D59 192 aa12.96□□□□□ -0.34
C9orf3-206ENST00000428313 HINT2Q9BX68 163 aa12.96□□□□□ -0.34
C9orf3-206ENST00000428313 SS18L2Q9UHA2 77 aa12.96□□□□□ -0.34
C9orf3-206ENST00000428313 FSTL3O95633 263 aa12.95□□□□□ -0.34
C9orf3-206ENST00000428313 HBDP02042 147 aa12.95□□□□□ -0.34
C9orf3-206ENST00000428313 INSL3P51460 131 aa12.95□□□□□ -0.34
C9orf3-206ENST00000428313 FOXG1P55316 489 aaPredicted RBP12.95□□□□□ -0.34
C9orf3-206ENST00000428313 GAGE5Q13069 117 aa12.95□□□□□ -0.34
C9orf3-206ENST00000428313 GAGE6Q13070 117 aa12.95□□□□□ -0.34
C9orf3-206ENST00000428313 C20orf78Q9BR46 151 aa12.95□□□□□ -0.34
C9orf3-206ENST00000428313 GNG12Q9UBI6 72 aa12.95□□□□□ -0.34
C9orf3-206ENST00000428313 EPOPA6NHQ4 379 aa12.95□□□□□ -0.34
C9orf3-206ENST00000428313 HLA-DRB4P13762 266 aa12.95□□□□□ -0.34
C9orf3-206ENST00000428313 IFI27P40305 119 aaPredicted RBP12.95□□□□□ -0.34
C9orf3-206ENST00000428313 FOXI1Q12951 378 aa12.95□□□□□ -0.34
C9orf3-206ENST00000428313 MRPL14Q6P1L8 145 aaKnown RBP12.95□□□□□ -0.34
C9orf3-206ENST00000428313 IFI27L1Q96BM0 104 aa12.95□□□□□ -0.34
C9orf3-206ENST00000428313 HLA-DRB4X5D2U9 266 aa12.95□□□□□ -0.34
C9orf3-206ENST00000428313 IGHV1-45A0A0A0MS14 117 aa12.94□□□□□ -0.34
C9orf3-206ENST00000428313 SSBP2P81877 361 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-206ENST00000428313 TAL2Q16559 108 aa12.94□□□□□ -0.34
C9orf3-206ENST00000428313 IMMP1LQ96LU5 166 aa12.94□□□□□ -0.34
C9orf3-206ENST00000428313 FAM110AQ9BQ89 295 aa12.94□□□□□ -0.34
C9orf3-206ENST00000428313 C1QTNF4Q9BXJ3 329 aa12.94□□□□□ -0.34
C9orf3-206ENST00000428313 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-206ENST00000428313 PGPA6NDG6 321 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms