RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 APOHP02749 345 aaPredicted RBP18.87■□□□□ 0.61
HERPUD2-205ENST00000427455 CAV2P51636 162 aa18.87■□□□□ 0.61
HERPUD2-205ENST00000427455 CYCSP99999 105 aaKnown RBP18.87■□□□□ 0.61
HERPUD2-205ENST00000427455 ALG5Q9Y673 324 aa18.87■□□□□ 0.61
HERPUD2-205ENST00000427455 DNAH9Q9NYC9 4486 aa18.87■□□□□ 0.61
HERPUD2-205ENST00000427455 FNDC10F2Z333 226 aa18.86■□□□□ 0.61
HERPUD2-205ENST00000427455 CD5P06127 495 aa18.86■□□□□ 0.61
HERPUD2-205ENST00000427455 CD7P09564 240 aa18.86■□□□□ 0.61
HERPUD2-205ENST00000427455 BCAP31P51572 246 aa18.86■□□□□ 0.61
HERPUD2-205ENST00000427455 USF2Q15853 346 aaPredicted RBP18.86■□□□□ 0.61
HERPUD2-205ENST00000427455 RGS21Q2M5E4 152 aa18.86■□□□□ 0.61
HERPUD2-205ENST00000427455 RNF125Q96EQ8 232 aa18.86■□□□□ 0.61
HERPUD2-205ENST00000427455 SMCO3A2RU48 225 aa18.85■□□□□ 0.61
HERPUD2-205ENST00000427455 HNRNPCP07910 306 aaKnown RBP eCLIP18.85■□□□□ 0.61
HERPUD2-205ENST00000427455 IGHV4-30-4P0DP06 118 aa18.85■□□□□ 0.61
HERPUD2-205ENST00000427455 H2BFSP57053 126 aa18.85■□□□□ 0.61
HERPUD2-205ENST00000427455 RRAS2P62070 204 aaPredicted RBP18.85■□□□□ 0.61
HERPUD2-205ENST00000427455 TMEM144Q7Z5S9 345 aa18.85■□□□□ 0.61
HERPUD2-205ENST00000427455 LYRM2Q9NU23 88 aaPredicted RBP18.85■□□□□ 0.61
HERPUD2-205ENST00000427455 MGAT4CQ9UBM8 478 aa18.85■□□□□ 0.61
HERPUD2-205ENST00000427455 IGHV3-66A0A0C4DH42 116 aa18.84■□□□□ 0.61
HERPUD2-205ENST00000427455 A8MZ25 164 aa18.84■□□□□ 0.61
HERPUD2-205ENST00000427455 DEDDO75618 318 aa18.84■□□□□ 0.61
HERPUD2-205ENST00000427455 FAM90A2PQ658T7 463 aa18.84■□□□□ 0.61
HERPUD2-205ENST00000427455 TCF24Q7RTU0 167 aa18.84■□□□□ 0.61
HERPUD2-205ENST00000427455 GGACTQ9BVM4 153 aa18.84■□□□□ 0.61
HERPUD2-205ENST00000427455 RABAC1Q9UI14 185 aa18.84■□□□□ 0.61
HERPUD2-205ENST00000427455 OR4C46A6NHA9 309 aa18.83■□□□□ 0.6
HERPUD2-205ENST00000427455 ARL16Q0P5N6 197 aa18.83■□□□□ 0.6
HERPUD2-205ENST00000427455 LILRB2Q8N423 598 aa18.83■□□□□ 0.6
HERPUD2-205ENST00000427455 GRAMD2BQ96HH9 432 aa18.83■□□□□ 0.6
HERPUD2-205ENST00000427455 U3KQE9 123 aa18.83■□□□□ 0.6
HERPUD2-205ENST00000427455 CFDP00746 253 aaPredicted RBP18.82■□□□□ 0.6
HERPUD2-205ENST00000427455 FRMD6-AS1P0C7T7 363 aa18.82■□□□□ 0.6
HERPUD2-205ENST00000427455 P2RY1P47900 373 aa18.82■□□□□ 0.6
HERPUD2-205ENST00000427455 OR2F1Q13607 317 aa18.82■□□□□ 0.6
HERPUD2-205ENST00000427455 PBDC1Q9BVG4 233 aa18.82■□□□□ 0.6
HERPUD2-205ENST00000427455 FAM24AA6NFZ4 105 aa18.81■□□□□ 0.6
HERPUD2-205ENST00000427455 DFFBO76075 338 aa18.81■□□□□ 0.6
HERPUD2-205ENST00000427455 RLN2P04090 185 aa18.81■□□□□ 0.6
HERPUD2-205ENST00000427455 NUP62P37198 522 aaPredicted RBP18.81■□□□□ 0.6
HERPUD2-205ENST00000427455 LYZP61626 148 aa18.81■□□□□ 0.6
HERPUD2-205ENST00000427455 SLC38A11Q08AI6 406 aa18.81■□□□□ 0.6
HERPUD2-205ENST00000427455 LRRC37A5PQ49AS3 106 aa18.81■□□□□ 0.6
HERPUD2-205ENST00000427455 STX12Q86Y82 276 aa18.81■□□□□ 0.6
HERPUD2-205ENST00000427455 NPVFQ9HCQ7 196 aa18.81■□□□□ 0.6
HERPUD2-205ENST00000427455 C19orf73Q9NVV2 129 aa18.81■□□□□ 0.6
HERPUD2-205ENST00000427455 OR11H12B2RN74 326 aa18.8■□□□□ 0.6
HERPUD2-205ENST00000427455 EIF2B2P49770 351 aaKnown RBP18.8■□□□□ 0.6
HERPUD2-205ENST00000427455 SULT1A1P50225 295 aa18.8■□□□□ 0.6
HERPUD2-205ENST00000427455 BPIFCQ8NFQ6 507 aa18.8■□□□□ 0.6
HERPUD2-205ENST00000427455 PPP1R1CQ8WVI7 109 aa18.8■□□□□ 0.6
HERPUD2-205ENST00000427455 WFDC10AQ9H1F0 79 aa18.8■□□□□ 0.6
HERPUD2-205ENST00000427455 TUBA4BQ9H853 241 aa18.8■□□□□ 0.6
HERPUD2-205ENST00000427455 PFDN2Q9UHV9 154 aa18.8■□□□□ 0.6
HERPUD2-205ENST00000427455 IGKV3-7A0A075B6H7 116 aa18.79■□□□□ 0.6
HERPUD2-205ENST00000427455 IGSF23A1L1A6 192 aa18.79■□□□□ 0.6
HERPUD2-205ENST00000427455 E5RGE8 158 aa18.79■□□□□ 0.6
HERPUD2-205ENST00000427455 CST7O76096 145 aa18.79■□□□□ 0.6
HERPUD2-205ENST00000427455 PAFAH1B2P68402 229 aa18.79■□□□□ 0.6
HERPUD2-205ENST00000427455 TEPPQ6URK8 271 aa18.79■□□□□ 0.6
HERPUD2-205ENST00000427455 TMEM252Q8N6L7 170 aa18.79■□□□□ 0.6
HERPUD2-205ENST00000427455 PET100P0DJ07 73 aa18.78■□□□□ 0.6
HERPUD2-205ENST00000427455 RPL11P62913 178 aaKnown RBP18.78■□□□□ 0.6
HERPUD2-205ENST00000427455 C16orf54Q6UWD8 224 aa18.78■□□□□ 0.6
HERPUD2-205ENST00000427455 CYP2G1PQ6ZSU1 146 aa18.78■□□□□ 0.6
HERPUD2-205ENST00000427455 DEFB125Q8N687 156 aa18.78■□□□□ 0.6
HERPUD2-205ENST00000427455 TMEM217Q8N7C4 229 aa18.78■□□□□ 0.6
HERPUD2-205ENST00000427455 HELTA6NFD8 242 aa18.77■□□□□ 0.6
HERPUD2-205ENST00000427455 BUB3O43684 328 aa18.77■□□□□ 0.6
HERPUD2-205ENST00000427455 TFPI2P48307 235 aa18.77■□□□□ 0.6
HERPUD2-205ENST00000427455 SELENOTP62341 195 aa18.77■□□□□ 0.6
HERPUD2-205ENST00000427455 HBG1P69891 147 aa18.77■□□□□ 0.6
HERPUD2-205ENST00000427455 HBG2P69892 147 aa18.77■□□□□ 0.6
HERPUD2-205ENST00000427455 OXA1LQ15070 435 aa18.77■□□□□ 0.6
HERPUD2-205ENST00000427455 GBGT1Q8N5D6 347 aa18.77■□□□□ 0.6
HERPUD2-205ENST00000427455 GLMPQ8WWB7 406 aa18.77■□□□□ 0.6
HERPUD2-205ENST00000427455 MED28Q9H204 178 aa18.77■□□□□ 0.6
HERPUD2-205ENST00000427455 MS4A6AQ9H2W1 248 aa18.77■□□□□ 0.6
HERPUD2-205ENST00000427455 OR5AC2Q9NZP5 309 aa18.77■□□□□ 0.6
HERPUD2-205ENST00000427455 COL7A1Q02388 2944 aa18.77■□□□□ 0.6
HERPUD2-205ENST00000427455 TRAV2A0A0B4J234 112 aa18.76■□□□□ 0.59
HERPUD2-205ENST00000427455 H0YIZ8 118 aa18.76■□□□□ 0.59
HERPUD2-205ENST00000427455 GATA2P23769 480 aaPredicted RBP18.76■□□□□ 0.59
HERPUD2-205ENST00000427455 S100A11P31949 105 aa18.76■□□□□ 0.59
HERPUD2-205ENST00000427455 ODF3L2Q3SX64 289 aa18.76■□□□□ 0.59
HERPUD2-205ENST00000427455 FAM110AQ9BQ89 295 aa18.76■□□□□ 0.59
HERPUD2-205ENST00000427455 SRD5A3Q9H8P0 318 aa18.76■□□□□ 0.59
HERPUD2-205ENST00000427455 NHLRC4P0CG21 123 aaPredicted RBP18.75■□□□□ 0.59
HERPUD2-205ENST00000427455 CXCL3P19876 107 aa18.75■□□□□ 0.59
HERPUD2-205ENST00000427455 TMEM182Q6ZP80 229 aaPredicted RBP18.75■□□□□ 0.59
HERPUD2-205ENST00000427455 ASCL2Q99929 193 aa18.75■□□□□ 0.59
HERPUD2-205ENST00000427455 SLC25A31Q9H0C2 315 aa18.75■□□□□ 0.59
HERPUD2-205ENST00000427455 UQCC1Q9NVA1 299 aa18.75■□□□□ 0.59
HERPUD2-205ENST00000427455 SLC45A2Q9UMX9 530 aa18.75■□□□□ 0.59
HERPUD2-205ENST00000427455 DNASE2O00115 360 aaPredicted RBP18.74■□□□□ 0.59
HERPUD2-205ENST00000427455 MPC2O95563 127 aa18.74■□□□□ 0.59
HERPUD2-205ENST00000427455 AP2S1P53680 142 aaPredicted RBP18.74■□□□□ 0.59
HERPUD2-205ENST00000427455 SBSPONQ8IVN8 264 aa18.74■□□□□ 0.59
HERPUD2-205ENST00000427455 STXBP6Q8NFX7 210 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms