RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 CHRDL1Q9BU40 450 aa13.28□□□□□ -0.28
CHEK1-202ENST00000427383 MAP1LC3BQ9GZQ8 125 aa13.28□□□□□ -0.28
CHEK1-202ENST00000427383 NUDT19A8MXV4 375 aa13.28□□□□□ -0.28
CHEK1-202ENST00000427383 PF4V1P10720 104 aa13.28□□□□□ -0.28
CHEK1-202ENST00000427383 CCL20P78556 96 aa13.28□□□□□ -0.28
CHEK1-202ENST00000427383 SPATA31B1PQ5VZV4 182 aa13.28□□□□□ -0.28
CHEK1-202ENST00000427383 LCN15Q6UWW0 184 aa13.28□□□□□ -0.28
CHEK1-202ENST00000427383 LCNL1Q6ZST4 164 aa13.28□□□□□ -0.28
CHEK1-202ENST00000427383 RNF152Q8N8N0 203 aa13.28□□□□□ -0.28
CHEK1-202ENST00000427383 MYOZ3Q8TDC0 251 aa13.28□□□□□ -0.28
CHEK1-202ENST00000427383 GATAD1Q8WUU5 269 aa13.28□□□□□ -0.28
CHEK1-202ENST00000427383 MARC2Q969Z3 335 aa13.28□□□□□ -0.28
CHEK1-202ENST00000427383 OR2C1O95371 312 aa13.27□□□□□ -0.29
CHEK1-202ENST00000427383 HBE1P02100 147 aa13.27□□□□□ -0.29
CHEK1-202ENST00000427383 FABP1P07148 127 aa13.27□□□□□ -0.29
CHEK1-202ENST00000427383 RD3LP0DJH9 198 aa13.27□□□□□ -0.29
CHEK1-202ENST00000427383 RHOBP62745 196 aa13.27□□□□□ -0.29
CHEK1-202ENST00000427383 KIAA0141Q14154 515 aaPredicted RBP13.27□□□□□ -0.29
CHEK1-202ENST00000427383 PFDN5Q99471 154 aa13.27□□□□□ -0.29
CHEK1-202ENST00000427383 SCRT1Q9BWW7 348 aa13.27□□□□□ -0.29
CHEK1-202ENST00000427383 GAR1Q9NY12 217 aaKnown RBP13.27□□□□□ -0.29
CHEK1-202ENST00000427383 A0A1B0GV50 99 aa13.26□□□□□ -0.29
CHEK1-202ENST00000427383 RAB19A4D1S5 217 aa13.26□□□□□ -0.29
CHEK1-202ENST00000427383 HMGB3O15347 200 aaKnown RBP13.26□□□□□ -0.29
CHEK1-202ENST00000427383 CRLF1O75462 422 aa13.26□□□□□ -0.29
CHEK1-202ENST00000427383 CLEC3BP05452 202 aa13.26□□□□□ -0.29
CHEK1-202ENST00000427383 STAG3L2P0CL84 134 aa13.26□□□□□ -0.29
CHEK1-202ENST00000427383 STAG3L3P0CL85 134 aa13.26□□□□□ -0.29
CHEK1-202ENST00000427383 FGF8P55075 233 aaPredicted RBP13.26□□□□□ -0.29
CHEK1-202ENST00000427383 FOXE3Q13461 319 aa13.26□□□□□ -0.29
CHEK1-202ENST00000427383 FAM78BQ5VT40 261 aa13.26□□□□□ -0.29
CHEK1-202ENST00000427383 COMMD1Q8N668 190 aa13.26□□□□□ -0.29
CHEK1-202ENST00000427383 OR51G1Q8NGK1 321 aa13.26□□□□□ -0.29
CHEK1-202ENST00000427383 OR1L4Q8NGR5 311 aa13.26□□□□□ -0.29
CHEK1-202ENST00000427383 DNAJC4Q9NNZ3 241 aa13.26□□□□□ -0.29
CHEK1-202ENST00000427383 FUT9Q9Y231 359 aa13.26□□□□□ -0.29
CHEK1-202ENST00000427383 MAST4O15021 2626 aa13.25□□□□□ -0.29
CHEK1-202ENST00000427383 ELOA3CA0A087WX78 387 aaPredicted RBP13.25□□□□□ -0.29
CHEK1-202ENST00000427383 A0A1W2PPV4 95 aa13.25□□□□□ -0.29
CHEK1-202ENST00000427383 TGOLN2O43493 480 aa13.25□□□□□ -0.29
CHEK1-202ENST00000427383 COX7A2P2O60397 106 aa13.25□□□□□ -0.29
CHEK1-202ENST00000427383 SLC35B1P78383 322 aa13.25□□□□□ -0.29
CHEK1-202ENST00000427383 MORN5Q5VZ52 161 aa13.25□□□□□ -0.29
CHEK1-202ENST00000427383 TEX38Q6PEX7 206 aa13.25□□□□□ -0.29
CHEK1-202ENST00000427383 CLEC19AQ6UXS0 136 aa13.25□□□□□ -0.29
CHEK1-202ENST00000427383 ZNF491Q8N8L2 437 aa13.25□□□□□ -0.29
CHEK1-202ENST00000427383 JMJD8Q96S16 334 aa13.25□□□□□ -0.29
CHEK1-202ENST00000427383 MRPL32Q9BYC8 188 aaKnown RBP13.25□□□□□ -0.29
CHEK1-202ENST00000427383 DOK5Q9P104 306 aa13.25□□□□□ -0.29
CHEK1-202ENST00000427383 A0A0G2JLM5 398 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 WI2-2373I1.2A0A1W2PRP0 233 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 NUPL2O15504 423 aaKnown RBP13.24□□□□□ -0.29
CHEK1-202ENST00000427383 SCGB2A1O75556 95 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 ELANEP08246 267 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 ZNF343Q6P1L6 599 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 MIR17HGQ75NE6 70 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 WIPF2Q8TF74 440 aaPredicted RBP13.24□□□□□ -0.29
CHEK1-202ENST00000427383 FAM210AQ96ND0 272 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 UHRF2Q96PU4 802 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.24□□□□□ -0.29
CHEK1-202ENST00000427383 ORM2P19652 201 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 PMS2P11Q13670 270 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 C10orf113Q5VZT2 155 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 OR1B1Q8NGR6 318 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 RNF125Q96EQ8 232 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 CITED4Q96RK1 184 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 RNF2Q99496 336 aa13.24□□□□□ -0.29
CHEK1-202ENST00000427383 MRPL27Q9P0M9 148 aaKnown RBP13.24□□□□□ -0.29
CHEK1-202ENST00000427383 HYPMO75409 117 aa13.23□□□□□ -0.29
CHEK1-202ENST00000427383 TRBV12-3P01733 135 aa13.23□□□□□ -0.29
CHEK1-202ENST00000427383 IL4P05112 153 aa13.23□□□□□ -0.29
CHEK1-202ENST00000427383 ARL14EPLP0DKL9 152 aa13.23□□□□□ -0.29
CHEK1-202ENST00000427383 LYZP61626 148 aa13.23□□□□□ -0.29
CHEK1-202ENST00000427383 SRSF3P84103 164 aaKnown RBP13.23□□□□□ -0.29
CHEK1-202ENST00000427383 USF2Q15853 346 aaPredicted RBP13.23□□□□□ -0.29
CHEK1-202ENST00000427383 ZNF600Q6ZNG1 722 aa13.23□□□□□ -0.29
CHEK1-202ENST00000427383 FAM167A-AS1Q96KT0 104 aa13.23□□□□□ -0.29
CHEK1-202ENST00000427383 C16orf95Q9H693 158 aa13.23□□□□□ -0.29
CHEK1-202ENST00000427383 ZFAND3Q9H8U3 227 aa13.23□□□□□ -0.29
CHEK1-202ENST00000427383 RPLP1P05386 114 aaKnown RBP13.22□□□□□ -0.29
CHEK1-202ENST00000427383 LINC00305Q7Z4B0 112 aa13.22□□□□□ -0.29
CHEK1-202ENST00000427383 Q8WTZ3 238 aa13.22□□□□□ -0.29
CHEK1-202ENST00000427383 ZNF503Q96F45 646 aa13.22□□□□□ -0.29
CHEK1-202ENST00000427383 TMPRSS5Q9H3S3 457 aa13.22□□□□□ -0.29
CHEK1-202ENST00000427383 PUS1Q9Y606 427 aaKnown RBP eCLIP13.22□□□□□ -0.29
CHEK1-202ENST00000427383 SETD2Q9BYW2 2564 aaPredicted RBP13.22□□□□□ -0.29
CHEK1-202ENST00000427383 PPP5D1E7EU14 171 aa13.21□□□□□ -0.29
CHEK1-202ENST00000427383 IGHV3-11P01762 117 aa13.21□□□□□ -0.29
CHEK1-202ENST00000427383 CD5P06127 495 aa13.21□□□□□ -0.29
CHEK1-202ENST00000427383 UQCC3Q6UW78 93 aa13.21□□□□□ -0.29
CHEK1-202ENST00000427383 KLHDC1Q8N7A1 406 aa13.21□□□□□ -0.29
CHEK1-202ENST00000427383 SLC25A2Q9BXI2 301 aa13.21□□□□□ -0.29
CHEK1-202ENST00000427383 CXorf1O96002 111 aa13.21□□□□□ -0.3
CHEK1-202ENST00000427383 CRYBA1P05813 215 aa13.21□□□□□ -0.3
CHEK1-202ENST00000427383 C8orf88P0DMB2 117 aa13.21□□□□□ -0.3
CHEK1-202ENST00000427383 OR4X2Q8NGF9 303 aa13.21□□□□□ -0.3
CHEK1-202ENST00000427383 PBDC1Q9BVG4 233 aa13.21□□□□□ -0.3
CHEK1-202ENST00000427383 TECRQ9NZ01 308 aaKnown RBP13.21□□□□□ -0.3
CHEK1-202ENST00000427383 HIGD1AQ9Y241 93 aa13.21□□□□□ -0.3
CHEK1-202ENST00000427383 TCF21O43680 179 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms