RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 SPATA25Q9BR10 227 aa10.14□□□□□ -0.79
SNX3-204ENST00000426155 MED28Q9H204 178 aa10.14□□□□□ -0.79
SNX3-204ENST00000426155 VSIRQ9H7M9 311 aa10.14□□□□□ -0.79
SNX3-204ENST00000426155 CACFD1Q9UGQ2 172 aa10.14□□□□□ -0.79
SNX3-204ENST00000426155 PIGBOS1A0A0B4J2F0 54 aa10.13□□□□□ -0.79
SNX3-204ENST00000426155 FAM90A26D6RGX4 464 aa10.13□□□□□ -0.79
SNX3-204ENST00000426155 WRBO00258 174 aa10.13□□□□□ -0.79
SNX3-204ENST00000426155 SYNGR2O43760 224 aa10.13□□□□□ -0.79
SNX3-204ENST00000426155 DFFBO76075 338 aa10.13□□□□□ -0.79
SNX3-204ENST00000426155 ETFRF1Q6IPR1 90 aa10.13□□□□□ -0.79
SNX3-204ENST00000426155 OR1S2Q8NGQ3 325 aa10.13□□□□□ -0.79
SNX3-204ENST00000426155 COQ8AQ8NI60 647 aa10.13□□□□□ -0.79
SNX3-204ENST00000426155 TRAV30A0A087WSZ9 112 aa10.12□□□□□ -0.79
SNX3-204ENST00000426155 OR4C46A6NHA9 309 aa10.12□□□□□ -0.79
SNX3-204ENST00000426155 CCSO14618 274 aa10.12□□□□□ -0.79
SNX3-204ENST00000426155 SCGB2A1O75556 95 aa10.12□□□□□ -0.79
SNX3-204ENST00000426155 TCRBP04435 133 aa10.12□□□□□ -0.79
SNX3-204ENST00000426155 IL4P05112 153 aa10.12□□□□□ -0.79
SNX3-204ENST00000426155 POLR2GP62487 172 aaKnown RBP eCLIP10.12□□□□□ -0.79
SNX3-204ENST00000426155 GAMTQ14353 236 aa10.12□□□□□ -0.79
SNX3-204ENST00000426155 USF2Q15853 346 aaPredicted RBP10.12□□□□□ -0.79
SNX3-204ENST00000426155 WFDC3Q8IUB2 231 aa10.12□□□□□ -0.79
SNX3-204ENST00000426155 APRG1Q8IVJ8 170 aa10.12□□□□□ -0.79
SNX3-204ENST00000426155 OR4D5Q8NGN0 318 aa10.12□□□□□ -0.79
SNX3-204ENST00000426155 SEC22CQ9BRL7 303 aa10.12□□□□□ -0.79
SNX3-204ENST00000426155 NUDT15Q9NV35 164 aa10.12□□□□□ -0.79
SNX3-204ENST00000426155 CSMD3Q7Z407 3707 aa10.11□□□□□ -0.79
SNX3-204ENST00000426155 STARD9Q9P2P6 4700 aa10.11□□□□□ -0.79
SNX3-204ENST00000426155 IGKV1D-37A0A075B6S9 117 aa10.11□□□□□ -0.79
SNX3-204ENST00000426155 MED6O75586 246 aa10.11□□□□□ -0.79
SNX3-204ENST00000426155 NPPCP23582 126 aa10.11□□□□□ -0.79
SNX3-204ENST00000426155 CRYBB3P26998 211 aa10.11□□□□□ -0.79
SNX3-204ENST00000426155 YPEL3P61236 119 aaPredicted RBP10.11□□□□□ -0.79
SNX3-204ENST00000426155 SPANXN5Q5MJ07 72 aa10.11□□□□□ -0.79
SNX3-204ENST00000426155 FAM24BQ8N5W8 94 aa10.11□□□□□ -0.79
SNX3-204ENST00000426155 ZNF431Q8TF32 576 aaPredicted RBP10.11□□□□□ -0.79
SNX3-204ENST00000426155 METTL26Q96S19 204 aa10.11□□□□□ -0.79
SNX3-204ENST00000426155 GGTLC1Q9BX51 225 aa10.11□□□□□ -0.79
SNX3-204ENST00000426155 MS4A6AQ9H2W1 248 aa10.11□□□□□ -0.79
SNX3-204ENST00000426155 HSPB11Q9Y547 144 aa10.11□□□□□ -0.79
SNX3-204ENST00000426155 LOC102724200A0A096LPH7 203 aaPredicted RBP10.1□□□□□ -0.79
SNX3-204ENST00000426155 LINC00862A6NCI5 91 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 PRSS46E5RG02 174 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 SSSCA1O60232 199 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 SCGB1D2O95969 90 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 TOMM40O96008 361 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 IFNA7P01567 189 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 PSG1P11464 419 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 P2RY1P47900 373 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 RAB14P61106 215 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 RPL11P62913 178 aaKnown RBP10.1□□□□□ -0.79
SNX3-204ENST00000426155 ZNF90Q03938 601 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 LINC00528Q8N1L1 170 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 Q8WTZ3 238 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 MITD1Q8WV92 249 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 SLC35E1Q96K37 410 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 MAP6D1Q9H9H5 199 aa10.1□□□□□ -0.79
SNX3-204ENST00000426155 DYNC2H1Q8NCM8 4307 aaKnown RBP10.09□□□□□ -0.79
SNX3-204ENST00000426155 IGKV1OR2-108A0A075B7D4 117 aa10.09□□□□□ -0.79
SNX3-204ENST00000426155 C7orf66A4D0T2 115 aa10.09□□□□□ -0.79
SNX3-204ENST00000426155 ZFP92A6NM28 416 aa10.09□□□□□ -0.79
SNX3-204ENST00000426155 IFNA21P01568 189 aa10.09□□□□□ -0.79
SNX3-204ENST00000426155 RPL35AP18077 110 aaKnown RBP10.09□□□□□ -0.79
SNX3-204ENST00000426155 BMI1P35226 326 aa10.09□□□□□ -0.79
SNX3-204ENST00000426155 GPX4P36969 197 aaPredicted RBP10.09□□□□□ -0.79
SNX3-204ENST00000426155 NKX2-1P43699 371 aaPredicted RBP10.09□□□□□ -0.79
SNX3-204ENST00000426155 RAB11AP62491 216 aa10.09□□□□□ -0.79
SNX3-204ENST00000426155 ID3Q02535 119 aa10.09□□□□□ -0.79
SNX3-204ENST00000426155 IAH1Q2TAA2 248 aaPredicted RBP10.09□□□□□ -0.79
SNX3-204ENST00000426155 OR51G1Q8NGK1 321 aa10.09□□□□□ -0.79
SNX3-204ENST00000426155 CIB3Q96Q77 187 aaPredicted RBP10.09□□□□□ -0.79
SNX3-204ENST00000426155 EDA2RQ9HAV5 297 aa10.09□□□□□ -0.79
SNX3-204ENST00000426155 RABAC1Q9UI14 185 aa10.09□□□□□ -0.79
SNX3-204ENST00000426155 U3KQE9 123 aa10.09□□□□□ -0.79
SNX3-204ENST00000426155 AGRNO00468 2067 aa10.08□□□□□ -0.8
SNX3-204ENST00000426155 RYR3Q15413 4870 aa10.08□□□□□ -0.8
SNX3-204ENST00000426155 PRAF2O60831 178 aa10.08□□□□□ -0.8
SNX3-204ENST00000426155 RD3LP0DJH9 198 aa10.08□□□□□ -0.8
SNX3-204ENST00000426155 ATP5IP56385 69 aaPredicted RBP10.08□□□□□ -0.8
SNX3-204ENST00000426155 OR2F1Q13607 317 aa10.08□□□□□ -0.8
SNX3-204ENST00000426155 Q5BKY6 102 aa10.08□□□□□ -0.8
SNX3-204ENST00000426155 STXBP6Q8NFX7 210 aa10.08□□□□□ -0.8
SNX3-204ENST00000426155 RNF125Q96EQ8 232 aa10.08□□□□□ -0.8
SNX3-204ENST00000426155 PBDC1Q9BVG4 233 aa10.08□□□□□ -0.8
SNX3-204ENST00000426155 TMEM231Q9H6L2 316 aa10.08□□□□□ -0.8
SNX3-204ENST00000426155 RCL1Q9Y2P8 373 aaKnown RBP10.08□□□□□ -0.8
SNX3-204ENST00000426155 A0A1W2PS18 150 aa10.07□□□□□ -0.8
SNX3-204ENST00000426155 DNASE2O00115 360 aaPredicted RBP10.07□□□□□ -0.8
SNX3-204ENST00000426155 H2AFB2P0C5Z0 115 aa10.07□□□□□ -0.8
SNX3-204ENST00000426155 PAX9P55771 341 aa10.07□□□□□ -0.8
SNX3-204ENST00000426155 LEMD1Q68G75 181 aa10.07□□□□□ -0.8
SNX3-204ENST00000426155 OR8G2PQ6IF36 304 aa10.07□□□□□ -0.8
SNX3-204ENST00000426155 C16orf54Q6UWD8 224 aa10.07□□□□□ -0.8
SNX3-204ENST00000426155 GSG1LQ6UXU4 331 aa10.07□□□□□ -0.8
SNX3-204ENST00000426155 ACOT7LQ6ZUV0 252 aa10.07□□□□□ -0.8
SNX3-204ENST00000426155 C9orf62Q8N4C0 152 aa10.07□□□□□ -0.8
SNX3-204ENST00000426155 MUC7Q8TAX7 377 aa10.07□□□□□ -0.8
SNX3-204ENST00000426155 GLMPQ8WWB7 406 aa10.07□□□□□ -0.8
SNX3-204ENST00000426155 NARS2Q96I59 477 aaKnown RBP10.07□□□□□ -0.8
SNX3-204ENST00000426155 PSENENQ9NZ42 101 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms