RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 EWSR1Q01844 656 aaKnown RBP eCLIP11.22□□□□□ -0.61
USB1-202ENST00000423271 SPANXN5Q5MJ07 72 aa11.22□□□□□ -0.61
USB1-202ENST00000423271 PRSS54Q6PEW0 395 aa11.22□□□□□ -0.61
USB1-202ENST00000423271 GSG1LQ6UXU4 331 aa11.22□□□□□ -0.61
USB1-202ENST00000423271 TCF24Q7RTU0 167 aa11.22□□□□□ -0.61
USB1-202ENST00000423271 OR4X1Q8NH49 305 aa11.22□□□□□ -0.61
USB1-202ENST00000423271 GINS3Q9BRX5 216 aa11.22□□□□□ -0.61
USB1-202ENST00000423271 A0A0J9YWU9 116 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 C7orf66A4D0T2 115 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 SPRY2O43597 315 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 SSNA1O43805 119 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 CLN5O75503 358 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 SIX6O95475 246 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 SLC25A4P12235 298 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 RND2P52198 227 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 PAX9P55771 341 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 RAB11AP62491 216 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 ETFRF1Q6IPR1 90 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 Q6ZWC4 215 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 VSIRQ9H7M9 311 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 MAP6D1Q9H9H5 199 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 PSENENQ9NZ42 101 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 TP53TG1Q9Y2A0 90 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 STRAPQ9Y3F4 350 aaKnown RBP11.21□□□□□ -0.61
USB1-202ENST00000423271 LSM5Q9Y4Y9 91 aaKnown RBP11.21□□□□□ -0.61
USB1-202ENST00000423271 ALG5Q9Y673 324 aa11.21□□□□□ -0.61
USB1-202ENST00000423271 KIR2DL5BA0A0G2JN68 375 aa11.2□□□□□ -0.62
USB1-202ENST00000423271 KIR2DL5BA0A0G2JPC4 375 aa11.2□□□□□ -0.62
USB1-202ENST00000423271 K7EPK0 472 aa11.2□□□□□ -0.62
USB1-202ENST00000423271 RPP30P78346 268 aaKnown RBP11.2□□□□□ -0.62
USB1-202ENST00000423271 IL15RAQ13261 267 aa11.2□□□□□ -0.62
USB1-202ENST00000423271 RGS21Q2M5E4 152 aa11.2□□□□□ -0.62
USB1-202ENST00000423271 WFDC3Q8IUB2 231 aa11.2□□□□□ -0.62
USB1-202ENST00000423271 KIR2DL5AQ8N109 375 aa11.2□□□□□ -0.62
USB1-202ENST00000423271 STPG3Q8N7X2 389 aa11.2□□□□□ -0.62
USB1-202ENST00000423271 KIR2DL5BQ8NHK3 375 aa11.2□□□□□ -0.62
USB1-202ENST00000423271 ACY3Q96HD9 319 aa11.2□□□□□ -0.62
USB1-202ENST00000423271 SMIM8Q96KF7 97 aa11.2□□□□□ -0.62
USB1-202ENST00000423271 RAB40CQ96S21 281 aa11.2□□□□□ -0.62
USB1-202ENST00000423271 PRSS46E5RG02 174 aa11.19□□□□□ -0.62
USB1-202ENST00000423271 UBE2CO00762 179 aa11.19□□□□□ -0.62
USB1-202ENST00000423271 DFFBO76075 338 aa11.19□□□□□ -0.62
USB1-202ENST00000423271 BMI1P35226 326 aa11.19□□□□□ -0.62
USB1-202ENST00000423271 GPX4P36969 197 aaPredicted RBP11.19□□□□□ -0.62
USB1-202ENST00000423271 TIGITQ495A1 244 aa11.19□□□□□ -0.62
USB1-202ENST00000423271 NPIPB3Q92617 1050 aa11.19□□□□□ -0.62
USB1-202ENST00000423271 RNF183Q96D59 192 aa11.19□□□□□ -0.62
USB1-202ENST00000423271 MS4A6AQ9H2W1 248 aa11.19□□□□□ -0.62
USB1-202ENST00000423271 TSC22D2O75157 780 aa11.18□□□□□ -0.62
USB1-202ENST00000423271 CCNKO75909 580 aa11.18□□□□□ -0.62
USB1-202ENST00000423271 IGKV1-17P01599 117 aa11.18□□□□□ -0.62
USB1-202ENST00000423271 IGLC1P0CG04 106 aa11.18□□□□□ -0.62
USB1-202ENST00000423271 TAS2R30P59541 319 aa11.18□□□□□ -0.62
USB1-202ENST00000423271 S100A10P60903 97 aa11.18□□□□□ -0.62
USB1-202ENST00000423271 RAB32Q13637 225 aa11.18□□□□□ -0.62
USB1-202ENST00000423271 PMS2P11Q13670 270 aa11.18□□□□□ -0.62
USB1-202ENST00000423271 GAMTQ14353 236 aa11.18□□□□□ -0.62
USB1-202ENST00000423271 FAM24BQ8N5W8 94 aa11.18□□□□□ -0.62
USB1-202ENST00000423271 SLC35E1Q96K37 410 aa11.18□□□□□ -0.62
USB1-202ENST00000423271 C11orf1Q9H5F2 150 aa11.18□□□□□ -0.62
USB1-202ENST00000423271 TRAV30A0A087WSZ9 112 aa11.17□□□□□ -0.62
USB1-202ENST00000423271 L7N2F9 121 aa11.17□□□□□ -0.62
USB1-202ENST00000423271 JTBO76095 146 aa11.17□□□□□ -0.62
USB1-202ENST00000423271 METTL15P1P0C7V9 234 aa11.17□□□□□ -0.62
USB1-202ENST00000423271 OR10J1P30954 320 aa11.17□□□□□ -0.62
USB1-202ENST00000423271 H2BFSP57053 126 aa11.17□□□□□ -0.62
USB1-202ENST00000423271 VAMP2P63027 116 aa11.17□□□□□ -0.62
USB1-202ENST00000423271 PAFAH1B2P68402 229 aa11.17□□□□□ -0.62
USB1-202ENST00000423271 OR8G2PQ6IF36 304 aa11.17□□□□□ -0.62
USB1-202ENST00000423271 TMEM14EPQ6UXP3 125 aa11.17□□□□□ -0.62
USB1-202ENST00000423271 OR1S2Q8NGQ3 325 aa11.17□□□□□ -0.62
USB1-202ENST00000423271 MGAT4CQ9UBM8 478 aa11.17□□□□□ -0.62
USB1-202ENST00000423271 VPS13DQ5THJ4 4388 aa11.16□□□□□ -0.62
USB1-202ENST00000423271 CXorf65A6NEN9 183 aa11.16□□□□□ -0.62
USB1-202ENST00000423271 PMS2P5A8MQ11 134 aa11.16□□□□□ -0.62
USB1-202ENST00000423271 DNASE2O00115 360 aaPredicted RBP11.16□□□□□ -0.62
USB1-202ENST00000423271 SCGB2A1O75556 95 aa11.16□□□□□ -0.62
USB1-202ENST00000423271 CD5P06127 495 aa11.16□□□□□ -0.62
USB1-202ENST00000423271 NPPCP23582 126 aa11.16□□□□□ -0.62
USB1-202ENST00000423271 CMC4P56277 68 aaPredicted RBP11.16□□□□□ -0.62
USB1-202ENST00000423271 DEFB131AP59861 70 aa11.16□□□□□ -0.62
USB1-202ENST00000423271 RPL11P62913 178 aaKnown RBP11.16□□□□□ -0.62
USB1-202ENST00000423271 OXA1LQ15070 435 aa11.16□□□□□ -0.62
USB1-202ENST00000423271 LEMD1Q68G75 181 aa11.16□□□□□ -0.62
USB1-202ENST00000423271 ACOT7LQ6ZUV0 252 aa11.16□□□□□ -0.62
USB1-202ENST00000423271 METTL26Q96S19 204 aa11.16□□□□□ -0.62
USB1-202ENST00000423271 CRYBB3P26998 211 aa11.15□□□□□ -0.62
USB1-202ENST00000423271 BCAP31P51572 246 aa11.15□□□□□ -0.62
USB1-202ENST00000423271 NMES1Q9C002 83 aa11.15□□□□□ -0.62
USB1-202ENST00000423271 CSTL1Q9H114 145 aa11.15□□□□□ -0.62
USB1-202ENST00000423271 TMEM231Q9H6L2 316 aa11.15□□□□□ -0.62
USB1-202ENST00000423271 RABAC1Q9UI14 185 aa11.15□□□□□ -0.62
USB1-202ENST00000423271 KMT2AQ03164 3969 aa11.15□□□□□ -0.62
USB1-202ENST00000423271 AGRNO00468 2067 aa11.15□□□□□ -0.63
USB1-202ENST00000423271 IGKV1D-37A0A075B6S9 117 aa11.14□□□□□ -0.63
USB1-202ENST00000423271 TRAV2A0A0B4J234 112 aa11.14□□□□□ -0.63
USB1-202ENST00000423271 FAM24AA6NFZ4 105 aa11.14□□□□□ -0.63
USB1-202ENST00000423271 PVALBP20472 110 aaPredicted RBP11.14□□□□□ -0.63
USB1-202ENST00000423271 P2RY1P47900 373 aa11.14□□□□□ -0.63
USB1-202ENST00000423271 CAV2P51636 162 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms