RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 TAGLN2P37802 199 aaKnown RBP6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 KIR2DS2P43631 304 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 SLURP1P55000 103 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 UBE2KP61086 200 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 FXYD3Q14802 87 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 TMEM177Q53S58 311 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 XP32Q5T750 250 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 ZNF66Q6ZN08 573 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 STX12Q86Y82 276 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 FAM24BQ8N5W8 94 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 MBD3L1Q8WWY6 194 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 WWC2-AS2Q96NR7 200 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 MS4A10Q96PG2 267 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 HSD17B10Q99714 261 aaKnown RBP6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 NIPSNAP3BQ9BS92 247 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 SH3BGRL3Q9H299 93 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 NIT2Q9NQR4 276 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 DMRT1Q9Y5R6 373 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 U3KQE9 123 aa6.31□□□□□ -1.4
TRIM43CP-201ENST00000422468 LOC102723971A0A1B0GUV8 181 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 FAM90A26D6RGX4 464 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 H3BQ15 152 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 RBFOX2O43251 390 aaKnown RBP eCLIP6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 SAP30O75446 220 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 CLN5O75503 358 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 OR13C7P0DN81 318 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 FHITP49789 147 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 RND2P52198 227 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 POLR2GP62487 172 aaKnown RBP eCLIP6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 SERF2P84101 59 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 ICAM4Q14773 271 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 ACSM6Q6P461 480 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 ZNF645Q8N7E2 425 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 OR5C1Q8NGR4 320 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 ISOC2Q96AB3 205 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 PINX1Q96BK5 328 aaKnown RBP6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 HARBI1Q96MB7 349 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 TMEM68Q96MH6 324 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 CTDSP1Q9GZU7 261 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 TIMM9Q9Y5J7 89 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 PUS1Q9Y606 427 aaKnown RBP eCLIP6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 SMAD5-AS1Q9Y6J3 95 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 U3KQK5 164 aa6.3□□□□□ -1.4
TRIM43CP-201ENST00000422468 A0A0G2JLM5 398 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 CGB1A6NKQ9 187 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 LINC00587B1AMM8 73 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 E7EUB6 86 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 SSSCA1O60232 199 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 ACTL6BO94805 426 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 BRI3O95415 125 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 IFNA1P01562 189 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 MYOD1P15172 320 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 NQO2P16083 231 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 F2RP25116 425 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 S100A2P29034 98 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 AKR1C3P42330 323 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 RPS10P46783 165 aaKnown RBP6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 PAX9P55771 341 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 CATR1Q13166 79 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 ELOBQ15370 118 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 VMA21Q3ZAQ7 101 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 ZNF818PQ6ZRF7 136 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 C19orf35Q6ZS72 473 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 SLC16A13Q7RTY0 426 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 TEX45Q8NA69 505 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 OR5T1Q8NG75 326 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 ZNF355PQ9NSJ1 428 aa6.29□□□□□ -1.4
TRIM43CP-201ENST00000422468 HUWE1Q7Z6Z7 4374 aaKnown RBP6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 TRBV24-1A0A075B6N3 115 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 PGLYRP1O75594 196 aaPredicted RBP6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 GP9P14770 177 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 DUTP33316 252 aaKnown RBP6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 HBG1P69891 147 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 HBG2P69892 147 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 CCL20P78556 96 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 DLK1P80370 383 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 PRSS8Q16651 343 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 ATP6V1FQ16864 119 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 C10orf55Q5SWW7 151 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 OSR1Q8TAX0 266 aaPredicted RBP6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 SCGB1C1Q8TD33 95 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 OR4C12Q96R67 309 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 ASCL2Q99929 193 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 RARRES2Q99969 163 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 C20orf24Q9BUV8 137 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 ELOVL1Q9BW60 279 aa6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 GAR1Q9NY12 217 aaKnown RBP6.28□□□□□ -1.4
TRIM43CP-201ENST00000422468 FCGR3BO75015 233 aa6.27□□□□□ -1.41
TRIM43CP-201ENST00000422468 IFNA10P01566 189 aa6.27□□□□□ -1.41
TRIM43CP-201ENST00000422468 IGLV1-51P01701 117 aa6.27□□□□□ -1.41
TRIM43CP-201ENST00000422468 SERPINE2P07093 398 aa6.27□□□□□ -1.41
TRIM43CP-201ENST00000422468 BCL2P10415 239 aa6.27□□□□□ -1.41
TRIM43CP-201ENST00000422468 OR2B8PP59922 312 aa6.27□□□□□ -1.41
TRIM43CP-201ENST00000422468 KLF5Q13887 457 aaPredicted RBP6.27□□□□□ -1.41
TRIM43CP-201ENST00000422468 TNXAQ16473 311 aa6.27□□□□□ -1.41
TRIM43CP-201ENST00000422468 ZNF674Q2M3X9 581 aa6.27□□□□□ -1.41
TRIM43CP-201ENST00000422468 OR2B11Q5JQS5 317 aa6.27□□□□□ -1.41
TRIM43CP-201ENST00000422468 ZNF343Q6P1L6 599 aa6.27□□□□□ -1.41
TRIM43CP-201ENST00000422468 VKORC1L1Q8N0U8 176 aa6.27□□□□□ -1.41
TRIM43CP-201ENST00000422468 CYB561D1Q8N8Q1 229 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms