RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 SUB1P53999 127 aaKnown RBP eCLIP10.72□□□□□ -0.69
MCF2L-213ENST00000421756 TMEM68Q96MH6 324 aa10.72□□□□□ -0.69
MCF2L-213ENST00000421756 PYGO2Q9BRQ0 406 aa10.72□□□□□ -0.69
MCF2L-213ENST00000421756 FAM90A9PA6NNJ1 464 aa10.71□□□□□ -0.69
MCF2L-213ENST00000421756 PMCHL1Q16048 86 aa10.71□□□□□ -0.69
MCF2L-213ENST00000421756 ZNF672Q499Z4 452 aaPredicted RBP10.71□□□□□ -0.69
MCF2L-213ENST00000421756 C2orf83Q53S99 150 aa10.71□□□□□ -0.69
MCF2L-213ENST00000421756 BTF3L4Q96K17 158 aa10.71□□□□□ -0.69
MCF2L-213ENST00000421756 G0S2P27469 103 aa10.71□□□□□ -0.69
MCF2L-213ENST00000421756 TMPRSS3P57727 454 aa10.71□□□□□ -0.69
MCF2L-213ENST00000421756 RPL15P61313 204 aaKnown RBP10.71□□□□□ -0.69
MCF2L-213ENST00000421756 JOSD1Q15040 202 aaPredicted RBP10.71□□□□□ -0.69
MCF2L-213ENST00000421756 IGFL4Q6B9Z1 124 aa10.71□□□□□ -0.69
MCF2L-213ENST00000421756 TMEM186Q96B77 213 aa10.71□□□□□ -0.69
MCF2L-213ENST00000421756 RCHY1Q96PM5 261 aa10.71□□□□□ -0.69
MCF2L-213ENST00000421756 EPG5Q9HCE0 2579 aa10.71□□□□□ -0.7
MCF2L-213ENST00000421756 CELSR2Q9HCU4 2923 aa10.71□□□□□ -0.7
MCF2L-213ENST00000421756 A0A1B0GWJ7 208 aa10.71□□□□□ -0.7
MCF2L-213ENST00000421756 PDPNQ86YL7 162 aa10.71□□□□□ -0.7
MCF2L-213ENST00000421756 WNT10AQ9GZT5 417 aa10.71□□□□□ -0.7
MCF2L-213ENST00000421756 CFAP46Q8IYW2 2715 aa10.71□□□□□ -0.7
MCF2L-213ENST00000421756 TMEM11P17152 192 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 FBLN7Q53RD9 439 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 C17orf77Q96MU5 243 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 ZNF257Q9Y2Q1 563 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 V9GYV3 84 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 ITPR1Q14643 2758 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 TCTAP57738 103 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 MEF2CQ06413 473 aaPredicted RBP10.7□□□□□ -0.7
MCF2L-213ENST00000421756 TMEM155Q4W5P6 130 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 BCL6BQ8N143 479 aaPredicted RBP10.7□□□□□ -0.7
MCF2L-213ENST00000421756 GBGT1Q8N5D6 347 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 VSTM2AQ8TAG5 236 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 GNB4Q9HAV0 340 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 IGHV1-3A0A0C4DH29 117 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 TGOLN2O43493 480 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 IGLV2-23P01705 113 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 CSN3P07498 182 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 PKIAP61925 76 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 LDLRAD2Q5SZI1 272 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 C22orf15Q8WYQ4 148 aa10.7□□□□□ -0.7
MCF2L-213ENST00000421756 MCRIP2Q9BUT9 160 aaKnown RBP10.7□□□□□ -0.7
MCF2L-213ENST00000421756 ZNF331Q9NQX6 463 aaPredicted RBP10.7□□□□□ -0.7
MCF2L-213ENST00000421756 IGHV3-49A0A0A0MS15 119 aa10.69□□□□□ -0.7
MCF2L-213ENST00000421756 GATCO43716 136 aaKnown RBP10.69□□□□□ -0.7
MCF2L-213ENST00000421756 BPIFB3P59826 476 aa10.69□□□□□ -0.7
MCF2L-213ENST00000421756 TMEM177Q53S58 311 aa10.69□□□□□ -0.7
MCF2L-213ENST00000421756 PRNTQ86SH4 94 aa10.69□□□□□ -0.7
MCF2L-213ENST00000421756 PPP1R27Q86WC6 154 aa10.69□□□□□ -0.7
MCF2L-213ENST00000421756 SRSF12Q8WXF0 261 aaKnown RBP10.69□□□□□ -0.7
MCF2L-213ENST00000421756 FAM167A-AS1Q96KT0 104 aa10.69□□□□□ -0.7
MCF2L-213ENST00000421756 RNF114Q9Y508 228 aa10.69□□□□□ -0.7
MCF2L-213ENST00000421756 A6NNC1 897 aa10.69□□□□□ -0.7
MCF2L-213ENST00000421756 LCN2P80188 198 aa10.69□□□□□ -0.7
MCF2L-213ENST00000421756 C11orf42Q8N5U0 333 aa10.69□□□□□ -0.7
MCF2L-213ENST00000421756 TMEM167AQ8TBQ9 72 aa10.69□□□□□ -0.7
MCF2L-213ENST00000421756 PGLYRP4Q96LB8 373 aa10.69□□□□□ -0.7
MCF2L-213ENST00000421756 ZANQ9Y493 2812 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 IGHV3-66A0A0C4DH42 116 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 K7ENP7 123 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 NBEAP1P0C6P0 100 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 PSG1P11464 419 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 RPL19P84098 196 aaKnown RBP10.68□□□□□ -0.7
MCF2L-213ENST00000421756 FOXL1Q12952 345 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 LCN12Q6JVE5 192 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 GOLT1AQ6ZVE7 132 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 SIGLECL1Q8N7X8 197 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 CLEC7AQ9BXN2 247 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 IGKV1D-37A0A075B6S9 117 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 TCRBV4S1A1TA0A5B7 111 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 PRRX1P54821 245 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 AARDQ4LEZ3 155 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 CIARTQ8N365 385 aaPredicted RBP10.68□□□□□ -0.7
MCF2L-213ENST00000421756 OR5R1Q8NH85 324 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 TP53TG3Q9ULZ0 132 aa10.68□□□□□ -0.7
MCF2L-213ENST00000421756 PEX7O00628 323 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 RNASEKQ6P5S7 137 aaKnown RBP10.67□□□□□ -0.7
MCF2L-213ENST00000421756 Q6ZWC4 215 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 NAGKQ9UJ70 344 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 LINC00527Q9UJ94 153 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 SIGLEC9Q9Y336 463 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 IGLC7A0M8Q6 106 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 M0R3E3 92 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 ZNF138P52744 262 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 B9A039 149 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 BUB1B-PAK6H3BSN5 160 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 EREGO14944 169 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 HYPMO75409 117 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 SLAQ13239 276 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 NUDT10Q8NFP7 164 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 ST6GALNAC6Q969X2 333 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 NUDT11Q96G61 164 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 UBTD1Q9HAC8 227 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 NOTCH2Q04721 2471 aa10.67□□□□□ -0.7
MCF2L-213ENST00000421756 HIGD1CA8MV81 97 aa10.66□□□□□ -0.7
MCF2L-213ENST00000421756 FCGR2BP31994 310 aaPredicted RBP10.66□□□□□ -0.7
MCF2L-213ENST00000421756 POU2AF1Q16633 256 aa10.66□□□□□ -0.7
MCF2L-213ENST00000421756 CYB5R2Q6BCY4 276 aa10.66□□□□□ -0.7
MCF2L-213ENST00000421756 OR8B3Q8NGG8 313 aa10.66□□□□□ -0.7
MCF2L-213ENST00000421756 OR8B2Q96RD0 313 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms