RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 IGKV1D-37A0A075B6S9 117 aa11.86□□□□□ -0.51
BRAT1-202ENST00000421712 CST7O76096 145 aa11.86□□□□□ -0.51
BRAT1-202ENST00000421712 APOHP02749 345 aaPredicted RBP11.86□□□□□ -0.51
BRAT1-202ENST00000421712 H2BFSP57053 126 aa11.86□□□□□ -0.51
BRAT1-202ENST00000421712 DLK1P80370 383 aa11.86□□□□□ -0.51
BRAT1-202ENST00000421712 THAP8Q8NA92 274 aa11.86□□□□□ -0.51
BRAT1-202ENST00000421712 ST8SIA2Q92186 375 aa11.86□□□□□ -0.51
BRAT1-202ENST00000421712 RABAC1Q9UI14 185 aa11.86□□□□□ -0.51
BRAT1-202ENST00000421712 LSM4Q9Y4Z0 139 aaKnown RBP11.86□□□□□ -0.51
BRAT1-202ENST00000421712 DEDDO75618 318 aa11.85□□□□□ -0.51
BRAT1-202ENST00000421712 HNRNPCP07910 306 aaKnown RBP eCLIP11.85□□□□□ -0.51
BRAT1-202ENST00000421712 LYZP61626 148 aa11.85□□□□□ -0.51
BRAT1-202ENST00000421712 TCF24Q7RTU0 167 aa11.85□□□□□ -0.51
BRAT1-202ENST00000421712 TMEM144Q7Z5S9 345 aa11.85□□□□□ -0.51
BRAT1-202ENST00000421712 STX12Q86Y82 276 aa11.85□□□□□ -0.51
BRAT1-202ENST00000421712 TMEM217Q8N7C4 229 aa11.85□□□□□ -0.51
BRAT1-202ENST00000421712 GRAMD2BQ96HH9 432 aa11.85□□□□□ -0.51
BRAT1-202ENST00000421712 NEURL2Q9BR09 285 aa11.85□□□□□ -0.51
BRAT1-202ENST00000421712 TUBA4BQ9H853 241 aa11.85□□□□□ -0.51
BRAT1-202ENST00000421712 NPVFQ9HCQ7 196 aa11.85□□□□□ -0.51
BRAT1-202ENST00000421712 DNAH3Q8TD57 4116 aa11.85□□□□□ -0.51
BRAT1-202ENST00000421712 IGKV1OR2-108A0A075B7D4 117 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 E5RGE8 158 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 TSPAN4O14817 238 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 CD7P09564 240 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 CRYBB3P26998 211 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 TFPI2P48307 235 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 PAFAH1B2P68402 229 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 SLC38A11Q08AI6 406 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 ARL16Q0P5N6 197 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 USF2Q15853 346 aaPredicted RBP11.84□□□□□ -0.51
BRAT1-202ENST00000421712 Q8N1Y9 231 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 LILRB2Q8N423 598 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 GBGT1Q8N5D6 347 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 TMEM252Q8N6L7 170 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 PPP1R1CQ8WVI7 109 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 PPP1R14BQ96C90 147 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 RNF125Q96EQ8 232 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 SPAG8Q99932 426 aaPredicted RBP11.84□□□□□ -0.51
BRAT1-202ENST00000421712 C11orf1Q9H5F2 150 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 LYRM2Q9NU23 88 aaPredicted RBP11.84□□□□□ -0.51
BRAT1-202ENST00000421712 PFDN2Q9UHV9 154 aa11.84□□□□□ -0.51
BRAT1-202ENST00000421712 IGSF23A1L1A6 192 aa11.83□□□□□ -0.52
BRAT1-202ENST00000421712 DNASE2O00115 360 aaPredicted RBP11.83□□□□□ -0.52
BRAT1-202ENST00000421712 DFFBO76075 338 aa11.83□□□□□ -0.52
BRAT1-202ENST00000421712 CD5P06127 495 aa11.83□□□□□ -0.52
BRAT1-202ENST00000421712 PET100P0DJ07 73 aa11.83□□□□□ -0.52
BRAT1-202ENST00000421712 SULT1A1P50225 295 aa11.83□□□□□ -0.52
BRAT1-202ENST00000421712 HBG1P69891 147 aa11.83□□□□□ -0.52
BRAT1-202ENST00000421712 HBG2P69892 147 aa11.83□□□□□ -0.52
BRAT1-202ENST00000421712 WFDC3Q8IUB2 231 aa11.83□□□□□ -0.52
BRAT1-202ENST00000421712 BPIFCQ8NFQ6 507 aa11.83□□□□□ -0.52
BRAT1-202ENST00000421712 GGACTQ9BVM4 153 aa11.83□□□□□ -0.52
BRAT1-202ENST00000421712 SLC25A31Q9H0C2 315 aa11.83□□□□□ -0.52
BRAT1-202ENST00000421712 VSIRQ9H7M9 311 aa11.83□□□□□ -0.52
BRAT1-202ENST00000421712 OR5AC2Q9NZP5 309 aa11.83□□□□□ -0.52
BRAT1-202ENST00000421712 OR4C46A6NHA9 309 aa11.82□□□□□ -0.52
BRAT1-202ENST00000421712 FNDC10F2Z333 226 aa11.82□□□□□ -0.52
BRAT1-202ENST00000421712 CFDP00746 253 aaPredicted RBP11.82□□□□□ -0.52
BRAT1-202ENST00000421712 IGHV4-30-4P0DP06 118 aa11.82□□□□□ -0.52
BRAT1-202ENST00000421712 GATA2P23769 480 aaPredicted RBP11.82□□□□□ -0.52
BRAT1-202ENST00000421712 S100A11P31949 105 aa11.82□□□□□ -0.52
BRAT1-202ENST00000421712 P2RY1P47900 373 aa11.82□□□□□ -0.52
BRAT1-202ENST00000421712 EIF2B2P49770 351 aaKnown RBP11.82□□□□□ -0.52
BRAT1-202ENST00000421712 OXA1LQ15070 435 aa11.82□□□□□ -0.52
BRAT1-202ENST00000421712 FCN2Q15485 313 aa11.82□□□□□ -0.52
BRAT1-202ENST00000421712 TEPPQ6URK8 271 aa11.82□□□□□ -0.52
BRAT1-202ENST00000421712 CYP2G1PQ6ZSU1 146 aa11.82□□□□□ -0.52
BRAT1-202ENST00000421712 OR11H12B2RN74 326 aa11.81□□□□□ -0.52
BRAT1-202ENST00000421712 MPC2O95563 127 aa11.81□□□□□ -0.52
BRAT1-202ENST00000421712 ORM2P19652 201 aa11.81□□□□□ -0.52
BRAT1-202ENST00000421712 CXCL3P19876 107 aa11.81□□□□□ -0.52
BRAT1-202ENST00000421712 UQCC1Q9NVA1 299 aa11.81□□□□□ -0.52
BRAT1-202ENST00000421712 H0YIZ8 118 aa11.8□□□□□ -0.52
BRAT1-202ENST00000421712 NUP62P37198 522 aaPredicted RBP11.8□□□□□ -0.52
BRAT1-202ENST00000421712 RAB31Q13636 194 aa11.8□□□□□ -0.52
BRAT1-202ENST00000421712 FAM90A2PQ658T7 463 aa11.8□□□□□ -0.52
BRAT1-202ENST00000421712 TMEM182Q6ZP80 229 aaPredicted RBP11.8□□□□□ -0.52
BRAT1-202ENST00000421712 DEFB125Q8N687 156 aa11.8□□□□□ -0.52
BRAT1-202ENST00000421712 STXBP6Q8NFX7 210 aa11.8□□□□□ -0.52
BRAT1-202ENST00000421712 OR11H7Q8NGC8 314 aa11.8□□□□□ -0.52
BRAT1-202ENST00000421712 OR1B1Q8NGR6 318 aa11.8□□□□□ -0.52
BRAT1-202ENST00000421712 ASCL2Q99929 193 aa11.8□□□□□ -0.52
BRAT1-202ENST00000421712 B9D2Q9BPU9 175 aa11.8□□□□□ -0.52
BRAT1-202ENST00000421712 TMEM147Q9BVK8 224 aa11.8□□□□□ -0.52
BRAT1-202ENST00000421712 UBQLN2Q9UHD9 624 aa11.8□□□□□ -0.52
BRAT1-202ENST00000421712 U3KQE9 123 aa11.8□□□□□ -0.52
BRAT1-202ENST00000421712 HELTA6NFD8 242 aa11.79□□□□□ -0.52
BRAT1-202ENST00000421712 FRMD6-AS1P0C7T7 363 aa11.79□□□□□ -0.52
BRAT1-202ENST00000421712 S100A7P31151 101 aa11.79□□□□□ -0.52
BRAT1-202ENST00000421712 SELENOTP62341 195 aa11.79□□□□□ -0.52
BRAT1-202ENST00000421712 NHLH2Q02577 135 aa11.79□□□□□ -0.52
BRAT1-202ENST00000421712 ATP6V1FQ16864 119 aa11.79□□□□□ -0.52
BRAT1-202ENST00000421712 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
BRAT1-202ENST00000421712 THAP6Q8TBB0 222 aa11.79□□□□□ -0.52
BRAT1-202ENST00000421712 RNF126Q9BV68 326 aa11.79□□□□□ -0.52
BRAT1-202ENST00000421712 WFDC10AQ9H1F0 79 aa11.79□□□□□ -0.52
BRAT1-202ENST00000421712 MS4A6AQ9H2W1 248 aa11.79□□□□□ -0.52
BRAT1-202ENST00000421712 DOK5Q9P104 306 aa11.79□□□□□ -0.52
BRAT1-202ENST00000421712 UBE2L5PA0A1B0GUS4 154 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms