RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 RTBDNQ9BSG5 229 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-205ENST00000418258 CYSLTR1Q9Y271 337 aa9.31□□□□□ -0.92
PTCH1-205ENST00000418258 LHFPL4Q7Z7J7 247 aa9.3□□□□□ -0.92
PTCH1-205ENST00000418258 LOC102723996A0A087X1L8 192 aa9.3□□□□□ -0.92
PTCH1-205ENST00000418258 IL18BPO95998 194 aa9.3□□□□□ -0.92
PTCH1-205ENST00000418258 TEX38Q6PEX7 206 aa9.3□□□□□ -0.92
PTCH1-205ENST00000418258 PIP4P2Q8N4L2 257 aa9.3□□□□□ -0.92
PTCH1-205ENST00000418258 MBNL3Q9NUK0 354 aaKnown RBP9.3□□□□□ -0.92
PTCH1-205ENST00000418258 OVOL1O14753 267 aa9.3□□□□□ -0.92
PTCH1-205ENST00000418258 OR2K2Q8NGT1 345 aa9.3□□□□□ -0.92
PTCH1-205ENST00000418258 TRAV2A0A0B4J234 112 aa9.3□□□□□ -0.92
PTCH1-205ENST00000418258 PEF1Q9UBV8 284 aaKnown RBP9.3□□□□□ -0.92
PTCH1-205ENST00000418258 TNFRSF14Q92956 283 aa9.3□□□□□ -0.92
PTCH1-205ENST00000418258 JPT2Q9H910 190 aa9.3□□□□□ -0.92
PTCH1-205ENST00000418258 IGHV3-53P01767 116 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 TRBV7-1A0A0A6YYK4 115 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 IFITM3Q01628 133 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 TRBV6-7A0A0A0MS04 114 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 NPIPB5A8MRT5 1133 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 PYYP10082 97 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 CTAG1AP78358 180 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 EPDR1Q9UM22 224 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 CACNA1HO95180 2353 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 ST6GALNAC3Q8NDV1 305 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 TNCP24821 2201 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 TMEM178BH3BS89 294 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 PLNP26678 52 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 SFTA2Q6UW10 78 aa9.29□□□□□ -0.92
PTCH1-205ENST00000418258 A0A1B0GWB2 263 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 TMEM8BA6NDV4 472 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 NTN3O00634 580 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-205ENST00000418258 NDPQ00604 133 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 UBE2E2Q96LR5 201 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 A0A1B0GV72 72 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 SSBP4Q9BWG4 385 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-205ENST00000418258 IGKV2-40A0A087WW87 121 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-205ENST00000418258 F2Z2F3 143 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 IGKV2D-40P01614 121 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-205ENST00000418258 LINC00614P0C842 121 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 MINOS1Q5TGZ0 78 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 LYZL4Q96KX0 146 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 SLC25A2Q9BXI2 301 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 PSG8Q9UQ74 426 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 CHTOPQ9Y3Y2 248 aaKnown RBP9.28□□□□□ -0.92
PTCH1-205ENST00000418258 MINOS1-NBL1R4GNA1 71 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 NPC2P61916 151 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 Q71RC1 249 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-205ENST00000418258 FAM169BQ8N8A8 192 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 SPAG8Q99932 426 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-205ENST00000418258 IGHV1-8P0DP01 117 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 DDTP30046 118 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 Q5BKY6 102 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 PLXNA3P51805 1871 aa9.28□□□□□ -0.92
PTCH1-205ENST00000418258 CD5P06127 495 aa9.27□□□□□ -0.92
PTCH1-205ENST00000418258 DEFB104AQ8WTQ1 72 aa9.27□□□□□ -0.92
PTCH1-205ENST00000418258 PLSCR4Q9NRQ2 329 aa9.27□□□□□ -0.92
PTCH1-205ENST00000418258 SP5Q6BEB4 398 aaPredicted RBP9.27□□□□□ -0.93
PTCH1-205ENST00000418258 ZNF329Q86UD4 541 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 ZNF525Q8N782 197 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 TANC2Q9HCD6 1990 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 LINC00271P0C7V0 271 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 DUTP33316 252 aaKnown RBP9.27□□□□□ -0.93
PTCH1-205ENST00000418258 C18orf12Q96KH6 178 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 IGKV1D-13A0A0B4J2D9 117 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 FCN3O75636 299 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 IGKV1-13P0DP09 117 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 PRCDQ00LT1 54 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 TPTE2P1Q5T6R2 138 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 IGHV1-3A0A0C4DH29 117 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 RNF223E7ERA6 249 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 ORMDL2Q53FV1 153 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 DPM2O94777 84 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 HBDP02042 147 aa9.27□□□□□ -0.93
PTCH1-205ENST00000418258 PMS2P5A8MQ11 134 aa9.26□□□□□ -0.93
PTCH1-205ENST00000418258 GGTLC3B5MD39 225 aa9.26□□□□□ -0.93
PTCH1-205ENST00000418258 C1QTNF4Q9BXJ3 329 aa9.26□□□□□ -0.93
PTCH1-205ENST00000418258 FGFBP3Q8TAT2 258 aa9.26□□□□□ -0.93
PTCH1-205ENST00000418258 A0A1B0GTI1 187 aa9.26□□□□□ -0.93
PTCH1-205ENST00000418258 SRRM4A7MD48 611 aaKnown RBP9.26□□□□□ -0.93
PTCH1-205ENST00000418258 NHLRC3Q5JS37 347 aa9.26□□□□□ -0.93
PTCH1-205ENST00000418258 LINC00114Q6XXX2 140 aa9.26□□□□□ -0.93
PTCH1-205ENST00000418258 GATD1Q8NB37 220 aa9.26□□□□□ -0.93
PTCH1-205ENST00000418258 RNF166Q96A37 237 aaPredicted RBP9.26□□□□□ -0.93
PTCH1-205ENST00000418258 ZNF98A6NK75 572 aa9.26□□□□□ -0.93
PTCH1-205ENST00000418258 BPESC1Q9GZL8 116 aa9.26□□□□□ -0.93
PTCH1-205ENST00000418258 MAPK1IP1LQ8NDC0 245 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 RPL36AP83881 106 aaKnown RBP9.25□□□□□ -0.93
PTCH1-205ENST00000418258 RPL36ALQ969Q0 106 aaKnown RBP9.25□□□□□ -0.93
PTCH1-205ENST00000418258 TRAV8-2A0A0B4J237 113 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 SRSF6Q13247 344 aaKnown RBP9.25□□□□□ -0.93
PTCH1-205ENST00000418258 SPSB3Q6PJ21 355 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 PGPEP1LA6NFU8 196 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 CA1P00915 261 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-205ENST00000418258 EFNB3Q15768 340 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 ATRXP46100 2492 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 MORN3Q6PF18 240 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-205ENST00000418258 Q96MF0 132 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 C2orf16Q68DN1 1984 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 LY6HO94772 140 aa9.25□□□□□ -0.93
PTCH1-205ENST00000418258 GGNQ86UU5 652 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms