RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 HSPG2P98160 4391 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 LYRM9A8MSI8 78 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 M0QYG6 137 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 B3GALNT1O75752 331 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 PSG1P11464 419 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 PI3P19957 117 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 RORCP51449 518 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 DEFB1P60022 68 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 SP6Q3SY56 376 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 FAM78BQ5VT40 261 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 SPATA12Q7Z6I5 190 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 FAM219AQ8IW50 185 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 OR51G1Q8NGK1 321 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 ACY3Q96HD9 319 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 WDR12Q9GZL7 423 aaKnown RBP5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 COPZ2Q9P299 210 aa5.53□□□□□ -1.52
HLA-DPA1-241ENST00000417724 DMBT1Q9UGM3 2413 aaPredicted RBP5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 CEBPZOSA8MTT3 80 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 F5H768 121 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 ISLRO14498 428 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 NUDT3O95989 172 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 DEFB130BP0DP73 79 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 DEFB130AP0DP74 79 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 UCP1P25874 307 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 RPS19P39019 145 aaKnown RBP5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 PAX9P55771 341 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 AARDQ4LEZ3 155 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 RNASE10Q5GAN6 216 aaKnown RBP5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 C1orf194Q5T5A4 169 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 SAMD13Q5VXD3 122 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 OR8G2PQ6IF36 304 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 SNX29P2Q8IUI4 249 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 CCDC71LQ8N9Z2 235 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 SLC24A4Q8NFF2 622 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 ZFAND1Q8TCF1 268 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 RNF125Q96EQ8 232 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 ABHD1Q96SE0 405 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 PBDC1Q9BVG4 233 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 RPRMQ9NS64 109 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 CACFD1Q9UGQ2 172 aa5.52□□□□□ -1.53
HLA-DPA1-241ENST00000417724 A0A0G2JRQ6 117 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 A0A0J9YX75 114 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 EPM2AB3EWF7 344 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 F6UB75 175 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 NXPH3O95157 252 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 CDS2O95674 445 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 APOA1P02647 267 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 FABP1P07148 127 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 B2MP61769 119 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 SUPT4H1P63272 117 aaKnown RBP5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 KLF9Q13886 244 aaPredicted RBP5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 CLINT1Q14677 625 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 NEDD8Q15843 81 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 LHFPL1Q86WI0 220 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 OR8I2Q8N0Y5 310 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 ARRDC1Q8N5I2 433 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 TERB2Q8NHR7 220 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 IGF2BP2-AS1Q96M15 143 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 TMEM222Q9H0R3 208 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 Q9H521 79 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 Q9H8V8 135 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 LINC00588Q9Y4M8 146 aa5.51□□□□□ -1.53
HLA-DPA1-241ENST00000417724 CBY3A6NI87 242 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 ZFP92A6NM28 416 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 ZNF705GA8MUZ8 300 aaPredicted RBP5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 SNRPGP15A8MWD9 76 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 SOCS3O14543 225 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 ATP5G1P05496 136 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 TBPP20226 339 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 TSPOP30536 169 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 ATP5G3P48201 142 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 MEOX2P50222 304 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 TTC32Q5I0X7 151 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 SSX7Q7RTT5 188 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 GLYATL2Q8WU03 294 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 TMEM170AQ8WVE7 144 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 RBPMSQ93062 196 aaKnown RBP5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 PPP1R14BQ96C90 147 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 DOK5Q9P104 306 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 COMMD3Q9UBI1 195 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 CACNG5Q9UF02 275 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 U3KQ87 197 aa5.5□□□□□ -1.53
HLA-DPA1-241ENST00000417724 TEX13DA0A0J9YY54 714 aaPredicted RBP5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 A8MTW9 85 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 GABARAPH6UMI1 98 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 DUSP14O95147 198 aaKnown RBP5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 GABARAPO95166 117 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 TNFAIP8O95379 198 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 INSP01308 110 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 CD3DP04234 171 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 OR5AC1P0C628 307 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 INAFM2P0DMQ5 153 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 BTF3P20290 206 aaKnown RBP5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 TGFBR1P36897 503 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 ATP5IP56385 69 aaPredicted RBP5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 KRTAP10-2P60368 255 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 NMSQ5H8A3 153 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 AMTNQ6UX39 209 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 GPR141Q7Z602 305 aa5.49□□□□□ -1.53
HLA-DPA1-241ENST00000417724 OR4C16Q8NGL9 310 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms