RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 ATP5G1P05496 136 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 HOXB6P17509 224 aaKnown RBP3.18□□□□□ -1.9
LINC01048-201ENST00000414480 CD70P32970 193 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 OPRK1P41145 380 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 CRISP3P54108 245 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 TAS2R45P59539 299 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 HLA-DRB3P79483 266 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 ZNF90Q03938 601 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 KIAA1644Q3SXP7 199 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 ZNF626Q68DY1 528 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 C11orf87Q6NUJ2 197 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 UFSP1Q6NVU6 142 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 SCGB1D4Q6XE38 83 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 ZNF627Q7L945 461 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 ATP5L2Q7Z4Y8 100 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 TRAPPC6BQ86SZ2 158 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 NR2C2APQ86WQ0 139 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 C1orf158Q8N1D5 194 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 CIARTQ8N365 385 aaPredicted RBP3.18□□□□□ -1.9
LINC01048-201ENST00000414480 METTL27Q8N6F8 245 aaPredicted RBP3.18□□□□□ -1.9
LINC01048-201ENST00000414480 OR4X2Q8NGF9 303 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 OR10AG1Q8NH19 301 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 OR1L3Q8NH93 324 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 VSTM2AQ8TAG5 236 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 COPS9Q8WXC6 57 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 FRZBQ92765 325 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 DLX4Q92988 240 aaPredicted RBP3.18□□□□□ -1.9
LINC01048-201ENST00000414480 DNAJA3Q96EY1 480 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 TM2D2Q9BX73 214 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 OR10A2Q9H208 303 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 PNRC2Q9NPJ4 139 aaKnown RBP3.18□□□□□ -1.9
LINC01048-201ENST00000414480 IL36AQ9UHA7 158 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 ZNF835Q9Y2P0 537 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 ABCA4P78363 2273 aa3.18□□□□□ -1.9
LINC01048-201ENST00000414480 TRBV20-1A0A075B6N2 111 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 A0A087WWC5 75 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 SAA2-SAA4A0A096LPE2 208 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 ARRDC5A6NEK1 342 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 SRRM4A7MD48 611 aaKnown RBP3.17□□□□□ -1.9
LINC01048-201ENST00000414480 UMAD1C9J7I0 102 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 FAM90A26D6RGX4 464 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 H3BRM9 83 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 J3QT63 122 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 APOC4-APOC2K7ER74 178 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 PLA2G10O15496 165 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 CREBL2O60519 120 aaPredicted RBP3.17□□□□□ -1.9
LINC01048-201ENST00000414480 NPIPB7O75200 414 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 HYPMO75409 117 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 APOMO95445 188 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 TNFP01375 233 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 APOC2P02655 101 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 MT-ATP8P03928 68 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 CD3DP04234 171 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 EIF4EP06730 217 aaKnown RBP3.17□□□□□ -1.9
LINC01048-201ENST00000414480 PGA4P0DJD7 388 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 PGA5P0DJD9 388 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 IGLC2P0DOY2 106 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 IGLC3P0DOY3 106 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 SLC25A6P12236 298 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 CA6P23280 308 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 SAA4P35542 130 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 VDAC2P45880 294 aaPredicted RBP3.17□□□□□ -1.9
LINC01048-201ENST00000414480 PSMB3P49720 205 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 ATP4BP51164 291 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 POLR2JP52435 117 aaKnown RBP3.17□□□□□ -1.9
LINC01048-201ENST00000414480 TAS2R19P59542 299 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 TMEM258P61165 79 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 RPS24P62847 133 aaKnown RBP3.17□□□□□ -1.9
LINC01048-201ENST00000414480 SEC11AP67812 179 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 PLGLB1Q02325 96 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 FOXI1Q12951 378 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 DAZ2Q13117 558 aaKnown RBP3.17□□□□□ -1.9
LINC01048-201ENST00000414480 PMCHL1Q16048 86 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 DUSP5Q16690 384 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 RTL8BQ17RB0 113 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 GSG1Q2KHT4 349 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 C12orf74Q32Q52 190 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 MS4A13Q5J8X5 152 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 COA6Q5JTJ3 125 aaKnown RBP3.17□□□□□ -1.9
LINC01048-201ENST00000414480 Q6AWC8 147 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 LAIR2Q6ISS4 152 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 DPPA3Q6W0C5 159 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 DAZ4Q86SG3 579 aaKnown RBP3.17□□□□□ -1.9
LINC01048-201ENST00000414480 SAXO1Q8IYX7 474 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 BCL6BQ8N143 479 aaPredicted RBP3.17□□□□□ -1.9
LINC01048-201ENST00000414480 FBXL14Q8N1E6 418 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 C10orf111Q8N326 155 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 LY6G5BQ8NDX9 201 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 OR10P1Q8NGE3 313 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 FGFBP3Q8TAT2 258 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 LMX1AQ8TE12 382 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 ITLN2Q8WWU7 325 aaPredicted RBP3.17□□□□□ -1.9
LINC01048-201ENST00000414480 SRSF12Q8WXF0 261 aaKnown RBP3.17□□□□□ -1.9
LINC01048-201ENST00000414480 POP5Q969H6 163 aaKnown RBP3.17□□□□□ -1.9
LINC01048-201ENST00000414480 TMEM230Q96A57 120 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 C2orf48Q96LS8 159 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 AQP10Q96PS8 301 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 IMMP2LQ96T52 175 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 SPIN2AQ99865 258 aa3.17□□□□□ -1.9
LINC01048-201ENST00000414480 SMR3AQ99954 134 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms