RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 SPATA31B1PQ5VZV4 182 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 C10orf99Q6UWK7 81 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 LCN15Q6UWW0 184 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 Q6ZSV7 163 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 ZNF329Q86UD4 541 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 COMMD1Q8N668 190 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 OR1L4Q8NGR5 311 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 GATAD1Q8WUU5 269 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 SFT2D1Q8WV19 159 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 TMEM37Q8WXS4 190 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 RAB24Q969Q5 203 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 ZNF414Q96IQ9 312 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 USMG5Q96IX5 58 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 JMJD8Q96S16 334 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 PFDN5Q99471 154 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 C19orf24Q9BVV8 132 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 MRPL32Q9BYC8 188 aaKnown RBP5.16□□□□□ -1.58
VPS41-204ENST00000413141 KLK15Q9H2R5 256 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 SEPSECSQ9HD40 501 aaKnown RBP5.16□□□□□ -1.58
VPS41-204ENST00000413141 SERTAD4Q9NUC0 356 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 GAR1Q9NY12 217 aaKnown RBP5.16□□□□□ -1.58
VPS41-204ENST00000413141 DOK5Q9P104 306 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 FUT9Q9Y231 359 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 MTORP42345 2549 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 ELOA3CA0A087WX78 387 aaPredicted RBP5.15□□□□□ -1.59
VPS41-204ENST00000413141 A0A0G2JLM5 398 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 A0A1W2PPV4 95 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 RAB19A4D1S5 217 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 J3QL48 77 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 NUPL2O15504 423 aaKnown RBP5.15□□□□□ -1.59
VPS41-204ENST00000413141 TGOLN2O43493 480 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 CRLF1O75462 422 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 OR2C1O95371 312 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 ELANEP08246 267 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 CTSGP08311 255 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 STAG3L2P0CL84 134 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 STAG3L3P0CL85 134 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 RD3LP0DJH9 198 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 RAB9AP51151 201 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 LYZP61626 148 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 CCL20P78556 96 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 FOXE3Q13461 319 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 FAM78BQ5VT40 261 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 C10orf113Q5VZT2 155 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 TEX38Q6PEX7 206 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 CLEC19AQ6UXS0 136 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 PATE2Q6UY27 113 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 LCNL1Q6ZST4 164 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 MIR17HGQ75NE6 70 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 EIF4E3Q8N5X7 224 aaKnown RBP5.15□□□□□ -1.59
VPS41-204ENST00000413141 RNF152Q8N8N0 203 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 OR51G1Q8NGK1 321 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 OR1B1Q8NGR6 318 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 MYOZ3Q8TDC0 251 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 MARC2Q969Z3 335 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 RNF125Q96EQ8 232 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 FAM210AQ96ND0 272 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 UHRF2Q96PU4 802 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 CITED4Q96RK1 184 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 RNF2Q99496 336 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 CHRDL1Q9BU40 450 aa5.15□□□□□ -1.59
VPS41-204ENST00000413141 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.14□□□□□ -1.59
VPS41-204ENST00000413141 WI2-2373I1.2A0A1W2PRP0 233 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 PPP5D1E7EU14 171 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 HYPMO75409 117 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 CXorf1O96002 111 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 TRBV12-3P01733 135 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 IGHV3-11P01762 117 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 IL4P05112 153 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 RPLP1P05386 114 aaKnown RBP5.14□□□□□ -1.59
VPS41-204ENST00000413141 CLEC3BP05452 202 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 CRYBA1P05813 215 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 ARL14EPLP0DKL9 152 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 ORM2P19652 201 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 ARL3P36405 182 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 TAS2R45P59539 299 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 SRSF3P84103 164 aaKnown RBP5.14□□□□□ -1.59
VPS41-204ENST00000413141 KIAA0141Q14154 515 aaPredicted RBP5.14□□□□□ -1.59
VPS41-204ENST00000413141 USF2Q15853 346 aaPredicted RBP5.14□□□□□ -1.59
VPS41-204ENST00000413141 KHDC3LQ587J8 217 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 TOR2AQ5JU69 321 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 MORN5Q5VZ52 161 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 ZNF343Q6P1L6 599 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 UQCC3Q6UW78 93 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 ZNF600Q6ZNG1 722 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 LINC00305Q7Z4B0 112 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 ZNF491Q8N8L2 437 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 Q8WTZ3 238 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 PBDC1Q9BVG4 233 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 SLC25A2Q9BXI2 301 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 TMPRSS5Q9H3S3 457 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 C16orf95Q9H693 158 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 ZFAND3Q9H8U3 227 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 GNB4Q9HAV0 340 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 DNAJC4Q9NNZ3 241 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 TECRQ9NZ01 308 aaKnown RBP5.14□□□□□ -1.59
VPS41-204ENST00000413141 MRPL27Q9P0M9 148 aaKnown RBP5.14□□□□□ -1.59
VPS41-204ENST00000413141 HIGD1AQ9Y241 93 aa5.14□□□□□ -1.59
VPS41-204ENST00000413141 PUS1Q9Y606 427 aaKnown RBP eCLIP5.14□□□□□ -1.59
VPS41-204ENST00000413141 TRAV5A0A0B4J249 113 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms