RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 LYNX1P0DP58 116 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 BRS3P32247 399 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 TNXAQ16473 311 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 STXBP6Q8NFX7 210 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 OR1B1Q8NGR6 318 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 RCHY1Q96PM5 261 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 EPDR1Q9UM22 224 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 MUC6Q6W4X9 2439 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 PTPRZ1P23471 2315 aaPredicted RBP12.69□□□□□ -0.38
HOXD3-202ENST00000410016 IGHV1-3A0A0C4DH29 117 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 BUB1B-PAK6H3BSN5 160 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 EREGO14944 169 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 GNG5P63218 68 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 TMEM183BQ1AE95 376 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 TOMM20LQ6UXN7 152 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 PERPQ96FX8 193 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 SAMD10Q9BYL1 202 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 KLF12Q9Y4X4 402 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 PAX2Q02962 417 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 WIPF2Q8TF74 440 aaPredicted RBP12.69□□□□□ -0.38
HOXD3-202ENST00000410016 SNHG12Q9BXW3 62 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 CBLN4Q9NTU7 201 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 INSIG2Q9Y5U4 225 aa12.69□□□□□ -0.38
HOXD3-202ENST00000410016 RELNP78509 3460 aa12.68□□□□□ -0.38
HOXD3-202ENST00000410016 A0A1W2PS18 150 aa12.68□□□□□ -0.38
HOXD3-202ENST00000410016 TEX22C9J3V5 150 aa12.68□□□□□ -0.38
HOXD3-202ENST00000410016 SRIP30626 198 aa12.68□□□□□ -0.38
HOXD3-202ENST00000410016 PRRX1P54821 245 aa12.68□□□□□ -0.38
HOXD3-202ENST00000410016 SLAQ13239 276 aa12.68□□□□□ -0.38
HOXD3-202ENST00000410016 USF2Q15853 346 aaPredicted RBP12.68□□□□□ -0.38
HOXD3-202ENST00000410016 PPP1R27Q86WC6 154 aa12.68□□□□□ -0.38
HOXD3-202ENST00000410016 NUP35Q8NFH5 326 aa12.68□□□□□ -0.38
HOXD3-202ENST00000410016 VKORC1Q9BQB6 163 aa12.68□□□□□ -0.38
HOXD3-202ENST00000410016 FBXL7Q9UJT9 491 aa12.68□□□□□ -0.38
HOXD3-202ENST00000410016 TLN1Q9Y490 2541 aaKnown RBP12.68□□□□□ -0.38
HOXD3-202ENST00000410016 ABCA1O95477 2261 aa12.68□□□□□ -0.38
HOXD3-202ENST00000410016 IGHV3-21A0A0B4J1V1 117 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 ZNF253O75346 499 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 CD3EP07766 207 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 NBEAP1P0C6P0 100 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 RASL11AQ6T310 242 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 SIGLECL1Q8N7X8 197 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 GRAMD2BQ96HH9 432 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 TACC2O95359 2948 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 PGPA6NDG6 321 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 APCSP02743 223 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 PLP1P60201 277 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 GDF5OSQ5U4N7 250 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 Q8N976 141 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 BLNKQ8WV28 456 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 C20orf144Q9BQM9 153 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 MLST8Q9BVC4 326 aa12.67□□□□□ -0.38
HOXD3-202ENST00000410016 F11RQ9Y624 299 aaKnown RBP12.67□□□□□ -0.38
HOXD3-202ENST00000410016 VWC2LB2RUY7 222 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 K7ENP7 123 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 HYPMO75409 117 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 GP9P14770 177 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 VN1R17PQ8TDU5 208 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 CLEC7AQ9BXN2 247 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 ZNF331Q9NQX6 463 aaPredicted RBP12.66□□□□□ -0.38
HOXD3-202ENST00000410016 TBL2Q9Y4P3 447 aaKnown RBP12.66□□□□□ -0.38
HOXD3-202ENST00000410016 SLC25A5P05141 298 aaKnown RBP12.66□□□□□ -0.38
HOXD3-202ENST00000410016 FAM87AP0C7U9 286 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 LINC00614P0C842 121 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 GAGE1Q13065 139 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 C8orf46Q8TAG6 207 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 LINC01560Q8TB33 94 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 KCNS1Q96KK3 526 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 SGK494Q96LW2 274 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 FAM103A1Q9BTL3 118 aaKnown RBP12.66□□□□□ -0.38
HOXD3-202ENST00000410016 GSX1Q9H4S2 264 aaPredicted RBP12.66□□□□□ -0.38
HOXD3-202ENST00000410016 CEP295Q9C0D2 2601 aa12.66□□□□□ -0.38
HOXD3-202ENST00000410016 CORTO00230 105 aa12.65□□□□□ -0.38
HOXD3-202ENST00000410016 TSKUQ8WUA8 353 aa12.65□□□□□ -0.38
HOXD3-202ENST00000410016 C22orf15Q8WYQ4 148 aa12.65□□□□□ -0.38
HOXD3-202ENST00000410016 NRN1Q9NPD7 142 aa12.65□□□□□ -0.38
HOXD3-202ENST00000410016 LY6LH3BQJ8 138 aa12.65□□□□□ -0.38
HOXD3-202ENST00000410016 SIAH2O43255 324 aa12.65□□□□□ -0.38
HOXD3-202ENST00000410016 RBPJQ06330 500 aa12.65□□□□□ -0.38
HOXD3-202ENST00000410016 LEMD1Q68G75 181 aa12.65□□□□□ -0.38
HOXD3-202ENST00000410016 PRR27Q6MZM9 219 aa12.65□□□□□ -0.38
HOXD3-202ENST00000410016 SMIM12Q96EX1 92 aa12.65□□□□□ -0.38
HOXD3-202ENST00000410016 GPR82Q96P67 336 aa12.65□□□□□ -0.38
HOXD3-202ENST00000410016 FBXL15Q9H469 300 aa12.65□□□□□ -0.38
HOXD3-202ENST00000410016 CHTOPQ9Y3Y2 248 aaKnown RBP12.65□□□□□ -0.38
HOXD3-202ENST00000410016 PPIAL4CA0A0B4J2A2 164 aa12.64□□□□□ -0.39
HOXD3-202ENST00000410016 ZNF324O75467 553 aaPredicted RBP12.64□□□□□ -0.39
HOXD3-202ENST00000410016 RBP4P02753 201 aa12.64□□□□□ -0.39
HOXD3-202ENST00000410016 PPIAL4GP0DN37 164 aa12.64□□□□□ -0.39
HOXD3-202ENST00000410016 HIST1H1EP10412 219 aaKnown RBP12.64□□□□□ -0.39
HOXD3-202ENST00000410016 AMTP48728 403 aa12.64□□□□□ -0.39
HOXD3-202ENST00000410016 UBE2G1P62253 170 aa12.64□□□□□ -0.39
HOXD3-202ENST00000410016 LDLRAD2Q5SZI1 272 aa12.64□□□□□ -0.39
HOXD3-202ENST00000410016 LINC00322Q6ZN03 302 aaPredicted RBP12.64□□□□□ -0.39
HOXD3-202ENST00000410016 MUC15Q8N387 334 aa12.64□□□□□ -0.39
HOXD3-202ENST00000410016 HIGD1CA8MV81 97 aa12.64□□□□□ -0.39
HOXD3-202ENST00000410016 IGLC1P0CG04 106 aa12.64□□□□□ -0.39
HOXD3-202ENST00000410016 C18orf32Q8TCD1 76 aa12.64□□□□□ -0.39
HOXD3-202ENST00000410016 ATG101Q9BSB4 218 aa12.64□□□□□ -0.39
HOXD3-202ENST00000410016 CHRDL1Q9BU40 450 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms