RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 MGLLQ99685 303 aa3.03□□□□□ -1.92
LSM5-206ENST00000409987 SEC22CQ9BRL7 303 aa3.03□□□□□ -1.92
LSM5-206ENST00000409987 ERGIC3Q9Y282 383 aa3.03□□□□□ -1.92
LSM5-206ENST00000409987 CEP250Q9BV73 2442 aa3.03□□□□□ -1.92
LSM5-206ENST00000409987 NAV1Q8NEY1 1877 aa3.03□□□□□ -1.93
LSM5-206ENST00000409987 ZSWIM8A7E2V4 1837 aa3.03□□□□□ -1.93
LSM5-206ENST00000409987 NID2Q14112 1375 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 SCN9AQ15858 1988 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 ZNF98A6NK75 572 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 C16orf90A8MZG2 172 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 CLDN25C9JDP6 229 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 ARPC5O15511 151 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 IFNA10P01566 189 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 PPBPP02775 128 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 ZNF286BP0CG31 522 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 HIST1H2BOP23527 126 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 HIST1H2BBP33778 126 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 CSN1S1P47710 185 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 HIST1H2BDP58876 126 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 LINC00315P59091 139 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 HIST1H2BCP62807 126 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 RBX1P62877 108 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 HIST2H2BEQ16778 126 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.02□□□□□ -1.93
LSM5-206ENST00000409987 TMEM69Q5SWH9 247 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 RPL22L1Q6P5R6 122 aaKnown RBP3.02□□□□□ -1.93
LSM5-206ENST00000409987 ZNF880Q6PDB4 577 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 EXOC3-AS1Q8N2X6 119 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 HIST1H2BHQ93079 126 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 BORCS5Q969J3 196 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 PLEKHB2Q96CS7 222 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 HIST1H2BNQ99877 126 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 HIST1H2BMQ99879 126 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 EFCAB11Q9BUY7 163 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 MND1Q9BWT6 205 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 RSPO3Q9BXY4 272 aaPredicted RBP3.02□□□□□ -1.93
LSM5-206ENST00000409987 PRO0461Q9UI25 63 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 PTPN13Q12923 2485 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 ANKRD12Q6UB98 2062 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 UBR2Q8IWV8 1755 aa3.02□□□□□ -1.93
LSM5-206ENST00000409987 YLPM1P49750 1951 aaKnown RBP3.01□□□□□ -1.93
LSM5-206ENST00000409987 PRRC2BQ5JSZ5 2229 aaKnown RBP3.01□□□□□ -1.93
LSM5-206ENST00000409987 FREM2Q5SZK8 3169 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 CEP295Q9C0D2 2601 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 IGKV1D-37A0A075B6S9 117 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 TMEM269A0A1B0GVZ9 245 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 GRIFINA4D1Z8 144 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 RIIAD1A6NNX1 92 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 C17orf51A8MQB3 221 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 J3QRK9 145 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 PRM2P04554 102 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 OR10J4P0C629 311 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 BLVRBP30043 206 aaPredicted RBP3.01□□□□□ -1.93
LSM5-206ENST00000409987 PSMD8P48556 350 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 RBM11P57052 281 aaKnown RBP3.01□□□□□ -1.93
LSM5-206ENST00000409987 FLI1Q01543 452 aaPredicted RBP3.01□□□□□ -1.93
LSM5-206ENST00000409987 DHRS2Q13268 280 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 EIF4EBP1Q13541 118 aaPredicted RBP3.01□□□□□ -1.93
LSM5-206ENST00000409987 ZNF322Q6U7Q0 402 aaPredicted RBP3.01□□□□□ -1.93
LSM5-206ENST00000409987 SDIM1Q6ZPB5 146 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 OR10D4PQ8NGN7 298 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 ZNF675Q8TD23 568 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 H1FXQ92522 213 aaKnown RBP3.01□□□□□ -1.93
LSM5-206ENST00000409987 CCDC32Q9BV29 185 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 IMUPQ9GZP8 106 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 FAM107BQ9H098 131 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 FUT9Q9Y231 359 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 ZNF835Q9Y2P0 537 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 AMMECR1Q9Y4X0 333 aaPredicted RBP3.01□□□□□ -1.93
LSM5-206ENST00000409987 KALRNO60229 2985 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 LOXHD1Q8IVV2 1947 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 COL12A1Q99715 3063 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 MYO18BQ8IUG5 2567 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 BRWD1Q9NSI6 2320 aa3.01□□□□□ -1.93
LSM5-206ENST00000409987 LAMB2P55268 1798 aa3□□□□□ -1.93
LSM5-206ENST00000409987 RELNP78509 3460 aa3□□□□□ -1.93
LSM5-206ENST00000409987 DDX60LQ5H9U9 1706 aaKnown RBP3□□□□□ -1.93
LSM5-206ENST00000409987 BAZ2AQ9UIF9 1905 aaKnown RBP3□□□□□ -1.93
LSM5-206ENST00000409987 IGHV3OR16-8A0A075B7F1 116 aa3□□□□□ -1.93
LSM5-206ENST00000409987 IGKV1D-43A0A0B4J1Z2 117 aa3□□□□□ -1.93
LSM5-206ENST00000409987 PIAS1O75925 651 aa3□□□□□ -1.93
LSM5-206ENST00000409987 OR2J2O76002 312 aa3□□□□□ -1.93
LSM5-206ENST00000409987 LY6HO94772 140 aa3□□□□□ -1.93
LSM5-206ENST00000409987 IGKV1-5P01602 117 aa3□□□□□ -1.93
LSM5-206ENST00000409987 IGHV1-69P01742 117 aa3□□□□□ -1.93
LSM5-206ENST00000409987 APOA2P02652 100 aa3□□□□□ -1.93
LSM5-206ENST00000409987 CSN2P05814 226 aa3□□□□□ -1.93
LSM5-206ENST00000409987 CRHBPP24387 322 aa3□□□□□ -1.93
LSM5-206ENST00000409987 GTF2A1P52655 376 aaPredicted RBP3□□□□□ -1.93
LSM5-206ENST00000409987 PIGPP57054 158 aa3□□□□□ -1.93
LSM5-206ENST00000409987 TAS2R30P59541 319 aa3□□□□□ -1.93
LSM5-206ENST00000409987 LYRM7Q5U5X0 104 aa3□□□□□ -1.93
LSM5-206ENST00000409987 DHFR2Q86XF0 187 aa3□□□□□ -1.93
LSM5-206ENST00000409987 NUP35Q8NFH5 326 aa3□□□□□ -1.93
LSM5-206ENST00000409987 SMDT1Q9H4I9 107 aa3□□□□□ -1.93
LSM5-206ENST00000409987 RNF122Q9H9V4 155 aa3□□□□□ -1.93
LSM5-206ENST00000409987 XAGE1AQ9HD64 81 aa3□□□□□ -1.93
LSM5-206ENST00000409987 IL36BQ9NZH7 164 aa3□□□□□ -1.93
LSM5-206ENST00000409987 TP73-AS1Q9UF72 201 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms