RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CD109Q6YHK3 1445 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 CAMSAP2Q08AD1 1489 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 TOPBP1Q92547 1522 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 TRAV5A0A0B4J249 113 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 ODAMA1E959 279 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 C9JAW5 83 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 H7C2G1 150 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 LYZL6O75951 148 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 TNFSF15O95150 251 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 UBBP0CG47 229 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 MPC1LP0DKB6 136 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 SDC4P31431 198 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 FXYD2P54710 66 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 RHOGP84095 191 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 PABPC1L2AQ5JQF8 200 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 DPPA3Q6W0C5 159 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 SLC35E3Q7Z769 313 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 RNASE11Q8TAA1 199 aaKnown RBP2.81□□□□□ -1.96
LSM5-205ENST00000409952 TCEAL2Q9H3H9 227 aaPredicted RBP2.81□□□□□ -1.96
LSM5-205ENST00000409952 MRPL16Q9NX20 251 aaKnown RBP2.81□□□□□ -1.96
LSM5-205ENST00000409952 HIGD1AQ9Y241 93 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 MED23Q9ULK4 1368 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 FANCD2Q9BXW9 1451 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 MYH3P11055 1940 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 CUL9Q8IWT3 2517 aa2.81□□□□□ -1.96
LSM5-205ENST00000409952 KIAA0586Q9BVV6 1533 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 A0A0D9SG52 128 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 A0A0J9YX75 114 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 TRBV10-2A0A0K0K1G8 114 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 RFPL4AA6NLU0 287 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 RFPL4AL1F8VTS6 287 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 CXCL1P09341 107 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 TMBIM6P55061 237 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 NDUFA6P56556 154 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 MSMO1Q15800 293 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 KHDC3LQ587J8 217 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 PHF5AQ7RTV0 110 aaKnown RBP2.8□□□□□ -1.96
LSM5-205ENST00000409952 TCTE3Q8IZS6 198 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 LXNQ9BS40 222 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 ADAT1Q9BUB4 502 aaKnown RBP2.8□□□□□ -1.96
LSM5-205ENST00000409952 HHLA3Q9XRX5 114 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 ATG2BQ96BY7 2078 aa2.8□□□□□ -1.96
LSM5-205ENST00000409952 ZNF638Q14966 1978 aaKnown RBP2.8□□□□□ -1.96
LSM5-205ENST00000409952 SIPA1L1O43166 1804 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 KIF13BQ9NQT8 1826 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 TRPM3Q9HCF6 1732 aaPredicted RBP2.79□□□□□ -1.96
LSM5-205ENST00000409952 CDK12Q9NYV4 1490 aaPredicted RBP2.79□□□□□ -1.96
LSM5-205ENST00000409952 OVOS2A0A0G2JMS6 1433 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 C7orf71A4D174 169 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 LRCOL1A6NCL2 159 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 K7EP13 123 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 NDUFB3O43676 98 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 SULT1C4O75897 302 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 DPM2O94777 84 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 NAPSAO96009 420 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 C1QCP02747 245 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 P0DMU3 169 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 FAM231AP0DMU4 169 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 FAM231CP0DMU5 169 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 HRES1P13985 223 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 AZU1P20160 251 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 SDC2P34741 201 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 ARPP19P56211 112 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 PDZD9Q8IXQ8 264 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 ZC2HC1AQ96GY0 325 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 PRADC1Q9BSG0 188 aa2.79□□□□□ -1.96
LSM5-205ENST00000409952 URB2Q14146 1524 aaKnown RBP2.78□□□□□ -1.96
LSM5-205ENST00000409952 LRRC7Q96NW7 1537 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 DOCK6Q96HP0 2047 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 MYH2Q9UKX2 1941 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 IGHV1-58A0A0C4DH39 117 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 J3QQQ9 107 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 OR2H2O95918 312 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 COX6A1P12074 109 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 DEFA4P12838 97 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 HLA-EP13747 358 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 HBBP68871 147 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 MYL5Q02045 173 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 VMA21Q3ZAQ7 101 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 FAM27BQ5VT28 67 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 EIF5AL1Q6IS14 154 aaKnown RBP2.78□□□□□ -1.96
LSM5-205ENST00000409952 RPL13AP3Q6NVV1 102 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 CGREF1Q99674 301 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 VPS25Q9BRG1 176 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 NPCDR1Q9BY65 106 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 UNC79Q9P2D8 2635 aa2.78□□□□□ -1.96
LSM5-205ENST00000409952 PDE4DIPQ5VU43 2346 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 TRAPPC8Q9Y2L5 1435 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 IGHV3-64A0A075B6Q5 118 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 IGHV1-18A0A0C4DH31 117 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 TRBV7-6A0A0J9YX20 115 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 A0A1B0GW64 132 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 C5orf58C9J3I9 102 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 HTR1AP08908 422 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 FABP2P12104 132 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 FUSP35637 526 aaKnown RBP eCLIP2.77□□□□□ -1.97
LSM5-205ENST00000409952 LY6EQ16553 131 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 DEFB134Q4QY38 66 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 PYDC2Q56P42 97 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 LINC00305Q7Z4B0 112 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms