RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CLEC3BP05452 202 aa9.69□□□□□ -0.86
CHMP3-204ENST00000409727 PATE2Q6UY27 113 aa9.69□□□□□ -0.86
CHMP3-204ENST00000409727 ZNF502Q8TBZ5 544 aa9.69□□□□□ -0.86
CHMP3-204ENST00000409727 GATAD1Q8WUU5 269 aa9.69□□□□□ -0.86
CHMP3-204ENST00000409727 EEF1AKMT3Q96AZ1 226 aa9.69□□□□□ -0.86
CHMP3-204ENST00000409727 CCDC140Q96MF4 163 aa9.69□□□□□ -0.86
CHMP3-204ENST00000409727 LINC00052Q96N35 136 aa9.69□□□□□ -0.86
CHMP3-204ENST00000409727 CHRDL1Q9BU40 450 aa9.69□□□□□ -0.86
CHMP3-204ENST00000409727 IGHV3OR16-8A0A075B7F1 116 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 TRAV30A0A087WSZ9 112 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 PSMB11A5LHX3 300 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 IGHV3-11P01762 117 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 UQCC3Q6UW78 93 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 OR1L4Q8NGR5 311 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 PFDN5Q99471 154 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 FLNBO75369 2602 aaKnown RBP9.68□□□□□ -0.86
CHMP3-204ENST00000409727 FAM223BA6NKX1 122 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 INAFM1C9JVW0 142 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 PPP5D1E7EU14 171 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 NUPL2O15504 423 aaKnown RBP9.68□□□□□ -0.86
CHMP3-204ENST00000409727 HYPMO75409 117 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 TOMM40O96008 361 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 IL4P05112 153 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 FABP1P07148 127 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 CTSGP08311 255 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 STAG3L2P0CL84 134 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 STAG3L3P0CL85 134 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 CFHR3Q02985 330 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 KLK9Q2XQG4 91 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 LINC00305Q7Z4B0 112 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 FAM223AQ8IWN6 122 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 TMEM86BQ8N661 226 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 OR51G1Q8NGK1 321 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 RXFP4Q8TDU9 374 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 SCRT1Q9BWW7 348 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 TMEM160Q9NX00 188 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 CDC42EP3Q9UKI2 254 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 KLK9Q9UKQ9 250 aa9.68□□□□□ -0.86
CHMP3-204ENST00000409727 OR7C2O60412 319 aa9.67□□□□□ -0.86
CHMP3-204ENST00000409727 CXorf1O96002 111 aa9.67□□□□□ -0.86
CHMP3-204ENST00000409727 IGLV1-40P01703 118 aa9.67□□□□□ -0.86
CHMP3-204ENST00000409727 SNRPCP09234 159 aaKnown RBP9.67□□□□□ -0.86
CHMP3-204ENST00000409727 OR10J4P0C629 311 aa9.67□□□□□ -0.86
CHMP3-204ENST00000409727 ADMP35318 185 aa9.67□□□□□ -0.86
CHMP3-204ENST00000409727 PPT1P50897 306 aa9.67□□□□□ -0.86
CHMP3-204ENST00000409727 CEBPGP53567 150 aa9.67□□□□□ -0.86
CHMP3-204ENST00000409727 UBE2G2P60604 165 aa9.67□□□□□ -0.86
CHMP3-204ENST00000409727 SCGB2A2Q13296 93 aa9.67□□□□□ -0.86
CHMP3-204ENST00000409727 PEA15Q15121 130 aa9.67□□□□□ -0.86
CHMP3-204ENST00000409727 LEMD1Q68G75 181 aa9.67□□□□□ -0.86
CHMP3-204ENST00000409727 TXN2Q99757 166 aa9.67□□□□□ -0.86
CHMP3-204ENST00000409727 C19orf24Q9BVV8 132 aa9.67□□□□□ -0.86
CHMP3-204ENST00000409727 TECRQ9NZ01 308 aaKnown RBP9.67□□□□□ -0.86
CHMP3-204ENST00000409727 ELOA3CA0A087WX78 387 aaPredicted RBP9.66□□□□□ -0.86
CHMP3-204ENST00000409727 TRBV7-1A0A0A6YYK4 115 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 SCGB2A1O75556 95 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 CD5P06127 495 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 RAB9AP51151 201 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 YPEL3P61236 119 aaPredicted RBP9.66□□□□□ -0.86
CHMP3-204ENST00000409727 KIAA0141Q14154 515 aaPredicted RBP9.66□□□□□ -0.86
CHMP3-204ENST00000409727 Q8WTZ3 238 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 RNF125Q96EQ8 232 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 OR5B12Q96R08 314 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 SLC25A2Q9BXI2 301 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 HIGD1AQ9Y241 93 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 PUS1Q9Y606 427 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHMP3-204ENST00000409727 CUBNO60494 3623 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 HIVEP2P31629 2446 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 LOC102723971A0A1B0GUV8 181 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 H3BUA1 57 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 SFTA3P0C7M3 94 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 BCL2P10415 239 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 GCHFRP30047 84 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 TAS2R45P59539 299 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 ICAM4Q14773 271 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 ZNF491Q8N8L2 437 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 OR5AU1Q8NGC0 362 aa9.66□□□□□ -0.86
CHMP3-204ENST00000409727 MRPL32Q9BYC8 188 aaKnown RBP9.66□□□□□ -0.86
CHMP3-204ENST00000409727 TMEM218A2RU14 115 aa9.65□□□□□ -0.86
CHMP3-204ENST00000409727 TGOLN2O43493 480 aa9.65□□□□□ -0.86
CHMP3-204ENST00000409727 PAGE4O60829 102 aa9.65□□□□□ -0.86
CHMP3-204ENST00000409727 IFNA1P01562 189 aa9.65□□□□□ -0.86
CHMP3-204ENST00000409727 TRBV12-3P01733 135 aa9.65□□□□□ -0.86
CHMP3-204ENST00000409727 IGHG4P01861 327 aa9.65□□□□□ -0.86
CHMP3-204ENST00000409727 HSPB1P04792 205 aaKnown RBP9.65□□□□□ -0.86
CHMP3-204ENST00000409727 C8orf88P0DMB2 117 aa9.65□□□□□ -0.86
CHMP3-204ENST00000409727 FCGR2BP31994 310 aaPredicted RBP9.65□□□□□ -0.86
CHMP3-204ENST00000409727 USF2Q15853 346 aaPredicted RBP9.65□□□□□ -0.86
CHMP3-204ENST00000409727 KHDC3LQ587J8 217 aa9.65□□□□□ -0.86
CHMP3-204ENST00000409727 ZNF418Q8TF45 676 aaPredicted RBP9.65□□□□□ -0.86
CHMP3-204ENST00000409727 ZNF503Q96F45 646 aa9.65□□□□□ -0.86
CHMP3-204ENST00000409727 RNF2Q99496 336 aa9.65□□□□□ -0.86
CHMP3-204ENST00000409727 KRBOX1C9JBD0 128 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 F8W036 122 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 CRYBA1P05813 215 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 PYYP10082 97 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 ZP3P21754 424 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 PSMB8P28062 276 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 PSMB3P49720 205 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 PLP1P60201 277 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms