RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TMEM170AQ8WVE7 144 aa13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 DUX3Q96PT4 197 aa13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 RPP21Q9H633 154 aaKnown RBP13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 EPDR1Q9UM22 224 aa13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 S4R3C0 116 aa13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 C2orf16Q68DN1 1984 aa13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 ADCYAP1P18509 176 aa13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 C1QL4Q86Z23 238 aa13.71□□□□□ -0.21
PCDHA13-202ENST00000409494 PARD6GQ9BYG4 376 aaPredicted RBP13.71□□□□□ -0.21
PCDHA13-202ENST00000409494 IGHV3-49A0A0A0MS15 119 aa13.71□□□□□ -0.21
PCDHA13-202ENST00000409494 IGHV1-69DA0A0B4J2H0 117 aa13.71□□□□□ -0.21
PCDHA13-202ENST00000409494 IGLV3-1P01715 115 aa13.71□□□□□ -0.21
PCDHA13-202ENST00000409494 IGHV1-69P01742 117 aa13.71□□□□□ -0.21
PCDHA13-202ENST00000409494 SAA4P35542 130 aa13.71□□□□□ -0.21
PCDHA13-202ENST00000409494 Q6ZR03 302 aa13.71□□□□□ -0.21
PCDHA13-202ENST00000409494 IGKV1-5P01602 117 aa13.71□□□□□ -0.22
PCDHA13-202ENST00000409494 KLRD1Q13241 179 aa13.71□□□□□ -0.22
PCDHA13-202ENST00000409494 TREML4Q6UXN2 200 aa13.71□□□□□ -0.22
PCDHA13-202ENST00000409494 TRBV24-1A0A075B6N3 115 aa13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 NUDT3O95989 172 aa13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 GTSCR1Q86UQ5 136 aa13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 IMMP2LQ96T52 175 aa13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 VSIRQ9H7M9 311 aa13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 ANAPC10Q9UM13 185 aa13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 C9orf139Q6ZV77 190 aa13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 AP5S1Q9NUS5 200 aa13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 LOC389332A0A1B0GUA5 103 aa13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 LYPD1Q8N2G4 141 aa13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 POLEQ07864 2286 aa13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 DOCK9Q9BZ29 2069 aa13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 SOD3P08294 240 aa13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 WT1P19544 449 aaPredicted RBP13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 RNF166Q96A37 237 aaPredicted RBP13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 ZFHX2Q9C0A1 2572 aaPredicted RBP13.7□□□□□ -0.22
PCDHA13-202ENST00000409494 TRGV11A0A075B6L2 103 aa13.69□□□□□ -0.22
PCDHA13-202ENST00000409494 BTF3P20290 206 aaKnown RBP13.69□□□□□ -0.22
PCDHA13-202ENST00000409494 TNFRSF18Q9Y5U5 241 aa13.69□□□□□ -0.22
PCDHA13-202ENST00000409494 PLXND1Q9Y4D7 1925 aa13.69□□□□□ -0.22
PCDHA13-202ENST00000409494 LINC01587Q99440 93 aa13.69□□□□□ -0.22
PCDHA13-202ENST00000409494 GGTLC1Q9BX51 225 aa13.69□□□□□ -0.22
PCDHA13-202ENST00000409494 OSTCQ9NRP0 149 aa13.69□□□□□ -0.22
PCDHA13-202ENST00000409494 CXCL1P09341 107 aa13.69□□□□□ -0.22
PCDHA13-202ENST00000409494 C12orf54Q6X4T0 127 aa13.69□□□□□ -0.22
PCDHA13-202ENST00000409494 DMRTC2Q8IXT2 367 aaPredicted RBP13.69□□□□□ -0.22
PCDHA13-202ENST00000409494 MIEN1Q9BRT3 115 aa13.69□□□□□ -0.22
PCDHA13-202ENST00000409494 LINC01549A6NIU2 74 aa13.69□□□□□ -0.22
PCDHA13-202ENST00000409494 CACNG7P62955 275 aa13.69□□□□□ -0.22
PCDHA13-202ENST00000409494 SRSF9Q13242 221 aaKnown RBP eCLIP13.68□□□□□ -0.22
PCDHA13-202ENST00000409494 SIGLEC15Q6ZMC9 328 aa13.68□□□□□ -0.22
PCDHA13-202ENST00000409494 ZNF841Q6ZN19 808 aa13.68□□□□□ -0.22
PCDHA13-202ENST00000409494 C8orf31Q8N9H6 132 aa13.68□□□□□ -0.22
PCDHA13-202ENST00000409494 FER1L6-AS1Q8NA97 138 aa13.68□□□□□ -0.22
PCDHA13-202ENST00000409494 TRBV20OR9-2A0A075B6H5 130 aa13.68□□□□□ -0.22
PCDHA13-202ENST00000409494 STAG3L2P0CL84 134 aa13.68□□□□□ -0.22
PCDHA13-202ENST00000409494 STAG3L3P0CL85 134 aa13.68□□□□□ -0.22
PCDHA13-202ENST00000409494 Q8NFD4 153 aa13.68□□□□□ -0.22
PCDHA13-202ENST00000409494 USF3Q68DE3 2245 aa13.68□□□□□ -0.22
PCDHA13-202ENST00000409494 GATA2P23769 480 aaPredicted RBP13.68□□□□□ -0.22
PCDHA13-202ENST00000409494 COTL1Q14019 142 aa13.68□□□□□ -0.22
PCDHA13-202ENST00000409494 A0A1W2PRX2 142 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 RNF223E7ERA6 249 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 IGKV3-20P01619 116 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 MST1LQ2TV78 715 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 NEU1Q99519 415 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 ZNF581Q9P0T4 197 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 SLC25A34Q6PIV7 304 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 OR10W1Q8NGF6 305 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 FER1L5A0AVI2 2057 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 IGHV3-66A0A0C4DH42 116 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 LINC00473A8K010 186 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 BRD3OSQ6XYD6 125 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 ZNF524Q96C55 264 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 C1orf147Q96MC9 270 aaPredicted RBP13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 KIF26AQ9ULI4 1882 aaPredicted RBP13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 PCNX1Q96RV3 2341 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 LOXP28300 417 aaPredicted RBP13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 RPL24P83731 157 aaKnown RBP13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 PSG8Q9UQ74 426 aa13.67□□□□□ -0.22
PCDHA13-202ENST00000409494 RFNGQ9Y644 331 aa13.66□□□□□ -0.22
PCDHA13-202ENST00000409494 RSPO1Q2MKA7 263 aaPredicted RBP13.66□□□□□ -0.22
PCDHA13-202ENST00000409494 ATOH7Q8N100 152 aa13.66□□□□□ -0.22
PCDHA13-202ENST00000409494 HIST3H2BBQ8N257 126 aa13.66□□□□□ -0.22
PCDHA13-202ENST00000409494 FAM110DQ8TAY7 271 aaPredicted RBP13.66□□□□□ -0.22
PCDHA13-202ENST00000409494 TMEM238LA0A1B0GVL6 79 aa13.66□□□□□ -0.22
PCDHA13-202ENST00000409494 A6NJY4 79 aa13.66□□□□□ -0.22
PCDHA13-202ENST00000409494 TMEM101Q96IK0 257 aa13.66□□□□□ -0.22
PCDHA13-202ENST00000409494 HIST1H2BLQ99880 126 aa13.66□□□□□ -0.22
PCDHA13-202ENST00000409494 PPBPP02775 128 aa13.65□□□□□ -0.22
PCDHA13-202ENST00000409494 TMEM219Q86XT9 240 aa13.65□□□□□ -0.22
PCDHA13-202ENST00000409494 F2Z2F3 143 aa13.65□□□□□ -0.22
PCDHA13-202ENST00000409494 WISP1O95388 367 aa13.65□□□□□ -0.22
PCDHA13-202ENST00000409494 PSG1P11464 419 aa13.65□□□□□ -0.22
PCDHA13-202ENST00000409494 NMUP48645 174 aa13.65□□□□□ -0.22
PCDHA13-202ENST00000409494 JOSD1Q15040 202 aaPredicted RBP13.65□□□□□ -0.22
PCDHA13-202ENST00000409494 C10orf55Q5SWW7 151 aa13.65□□□□□ -0.22
PCDHA13-202ENST00000409494 FAM74A4Q5TZK3 123 aa13.65□□□□□ -0.22
PCDHA13-202ENST00000409494 ZNF833PQ6ZTB9 187 aa13.65□□□□□ -0.22
PCDHA13-202ENST00000409494 OR5AN1Q8NGI8 311 aa13.65□□□□□ -0.22
PCDHA13-202ENST00000409494 C1QTNF4Q9BXJ3 329 aa13.65□□□□□ -0.22
PCDHA13-202ENST00000409494 DENND4CQ5VZ89 1909 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms