RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 TRAV38-1A0A0B4J264 116 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 A0A1W2PPM0 123 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 A0A1W2PR77 199 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 C2orf70A6NJV1 201 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 INAFM1C9JVW0 142 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 SYS1-DBNDD2H3BUS1 97 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 ISLRO14498 428 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 RER1O15258 196 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 TNFSF12O43508 249 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 PGLYRP1O75594 196 aaPredicted RBP4.44□□□□□ -1.7
CLK1-202ENST00000409403 OR2J3O76001 311 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 EML2O95834 649 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 TSPAN13O95857 204 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 APOA2P02652 100 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 LIPFP07098 398 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 COX8AP10176 69 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 ATP5G3P48201 142 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 FABP6P51161 128 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 TCL1AP56279 114 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 RBM11P57052 281 aaKnown RBP4.44□□□□□ -1.7
CLK1-202ENST00000409403 KRTAP10-9P60411 292 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 ARL16Q0P5N6 197 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 GABRA6Q16445 453 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 NNATQ16517 81 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 RTL8BQ17RB0 113 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 PRAMEF5Q5TYX0 476 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 PRAMEF6Q5VXH4 476 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 TMEM215Q68D42 235 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 DGAT2L6Q6ZPD8 337 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 ZNF645Q8N7E2 425 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 OR4X2Q8NGF9 303 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 OCC1Q8TAD7 63 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 NAT6Q93015 286 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 SPTSSAQ969W0 71 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 FAM234AQ9H0X4 552 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 VCX2Q9H322 139 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 SLC17A4Q9Y2C5 497 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 V9GYV3 84 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 TNRC6AQ8NDV7 1962 aaKnown RBP4.44□□□□□ -1.7
CLK1-202ENST00000409403 DIDO1Q9BTC0 2240 aaKnown RBP4.44□□□□□ -1.7
CLK1-202ENST00000409403 RYR3Q15413 4870 aa4.44□□□□□ -1.7
CLK1-202ENST00000409403 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.43□□□□□ -1.7
CLK1-202ENST00000409403 A0A0J9YY10 115 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 SMIM27A0A1W2PRY6 76 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 F8W1H4 67 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 CRYAAP02489 173 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 STAG3L2P0CL84 134 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 SPTBP11277 2137 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 HOXD3P31249 432 aaPredicted RBP4.43□□□□□ -1.7
CLK1-202ENST00000409403 SSTR5P35346 364 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 CCL7P80098 99 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 PMP22Q01453 160 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 MS4A18Q3C1V0 323 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 TIMM23BQ5SRD1 257 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 LCN12Q6JVE5 192 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 EBLN2Q6P2I7 272 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 RNASEKQ6P5S7 137 aaKnown RBP4.43□□□□□ -1.7
CLK1-202ENST00000409403 SLC25A47Q6Q0C1 308 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 Q6ZSR6 202 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 ERASQ7Z444 233 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 LINC00596Q86U02 117 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 FAM19A2Q8N3H0 131 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 ZNF114Q8NC26 417 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 OR2Z1Q8NG97 314 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 ZNF418Q8TF45 676 aaPredicted RBP4.43□□□□□ -1.7
CLK1-202ENST00000409403 GATAD1Q8WUU5 269 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 NEUROG1Q92886 237 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 PIGTQ969N2 578 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 OR2D2Q9H210 308 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 FNDC4Q9H6D8 234 aaPredicted RBP4.43□□□□□ -1.7
CLK1-202ENST00000409403 METTL7AQ9H8H3 244 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 HIF1ANQ9NWT6 349 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 BOKQ9UMX3 212 aaPredicted RBP4.43□□□□□ -1.7
CLK1-202ENST00000409403 SOX21Q9Y651 276 aaPredicted RBP4.43□□□□□ -1.7
CLK1-202ENST00000409403 MYOFQ9NZM1 2061 aa4.43□□□□□ -1.7
CLK1-202ENST00000409403 MPDZO75970 2070 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 C17orf51A8MQB3 221 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 F5H5K5 113 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 H3BUT2 72 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 TNFSF11O14788 317 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 NDUFS7O75251 213 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 LEPROTL1O95214 131 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 GABRG2P18507 467 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 OPRK1P41145 380 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 TNXAQ16473 311 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 FAM69BQ5VUD6 431 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 PRR26Q8N8Z3 221 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 NEXN-AS1Q8NBZ9 246 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 OR1F12Q8NHA8 337 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 FLVCR1-AS1Q8TAF5 88 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 ZNF501Q96CX3 271 aaPredicted RBP4.42□□□□□ -1.7
CLK1-202ENST00000409403 TMEM167BQ9NRX6 74 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 TNFRSF19Q9NS68 423 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 THYN1Q9P016 225 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 CYSLTR1Q9Y271 337 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 OR2W1Q9Y3N9 320 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 TSSC4Q9Y5U2 329 aaPredicted RBP4.42□□□□□ -1.7
CLK1-202ENST00000409403 FREM3P0C091 2139 aa4.42□□□□□ -1.7
CLK1-202ENST00000409403 TRBV20OR9-2A0A075B6H5 130 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 272.6 ms