RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 ZNF407Q9C0G0 2248 aa8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 TRAV17A0A0B4J275 112 aa8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 KLRC4-KLRK1H3BQV0 150 aa8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 SPINK4O60575 86 aa8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 CYB561P49447 251 aa8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 TCL1AP56279 114 aa8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 BRWD1-AS2P59051 145 aa8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 FXYD3Q14802 87 aa8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 C16orf47Q6ZP98 133 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 GATD1Q8NB37 220 aa8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 STXBP6Q8NFX7 210 aa8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 ADTRPQ96IZ2 230 aa8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 METTL7AQ9H8H3 244 aa8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 SPANXB1Q9NS25 103 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 TRAPPC2LQ9UL33 140 aa8.67□□□□□ -1.02
NIF3L1-204ENST00000409357 A1L4Q6 167 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 SMAD7O15105 426 aaKnown RBP8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 AGFG2O95081 481 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 APOA2P02652 100 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 CRYGCP07315 174 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 DUTP33316 252 aaKnown RBP8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 OR1C1Q15619 314 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 LGALS9BQ3B8N2 356 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 LGALS9CQ6DKI2 356 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 SSX8Q7RTT4 187 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 S100A7AQ86SG5 101 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 STPG3Q8N7X2 389 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 MDS2Q8NDY4 140 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 ZNF418Q8TF45 676 aaPredicted RBP8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 TMEM190Q8WZ59 177 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 PSMG3-AS1Q96PY0 264 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 MRPL32Q9BYC8 188 aaKnown RBP8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 GEMIN7Q9H840 131 aaKnown RBP8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 RABAC1Q9UI14 185 aa8.66□□□□□ -1.02
NIF3L1-204ENST00000409357 ZNHIT1O43257 154 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 SMIM13P0DJ93 91 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 RPL30P62888 115 aaKnown RBP8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 GNG3P63215 75 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 SLC35B1P78383 322 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 PLGLB1Q02325 96 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 ZNF766Q5HY98 468 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 SAMD5Q5TGI4 173 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 ZNF841Q6ZN19 808 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 C1orf122Q6ZSJ8 110 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 RPS19BP1Q86WX3 136 aaKnown RBP8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 TTC9CQ8N5M4 171 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 GTSF1Q8WW33 167 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 IL1F10Q8WWZ1 152 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 ZNF479Q96JC4 524 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 ZNF747Q9BV97 191 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 C7orf69Q9H7B7 122 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 SERTAD4Q9NUC0 356 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 TSSC4Q9Y5U2 329 aaPredicted RBP8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 DNAJC13O75165 2243 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 APCP25054 2843 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 FBN2P35556 2912 aa8.65□□□□□ -1.02
NIF3L1-204ENST00000409357 C17orf98A8MV24 154 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 VSTM5A8MXK1 200 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 GGTLC3B5MD39 225 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 K7EQM0 130 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 ZFAND5O76080 213 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 IGHV3-7P01780 117 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 ADH4P08319 380 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 GPR12P47775 334 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 RAC3P60763 192 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 RPL24P83731 157 aaKnown RBP8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 PSG5Q15238 335 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 CEACAM16Q2WEN9 425 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 C8orf46Q8TAG6 207 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 ZNF502Q8TBZ5 544 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 PERPQ96FX8 193 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 FOXB1Q99853 325 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 PRSS22Q9GZN4 317 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 SPANXA1Q9NS26 97 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 ZNF492Q9P255 531 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 JPT1Q9UK76 154 aa8.65□□□□□ -1.03
NIF3L1-204ENST00000409357 hADV38S2A0JD32 116 aa8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 A8MWL6 223 aa8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 SHISA9B4DS77 424 aa8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 J3QT63 122 aa8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 FOXH1O75593 365 aa8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 CSN1S1P47710 185 aa8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 LTC4SQ16873 150 aa8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 SPATA31B1PQ5VZV4 182 aa8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 ATP6V0E2Q8NHE4 81 aa8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 NEU4Q8WWR8 484 aaPredicted RBP8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 FAM168AQ92567 244 aa8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 ZNF837Q96EG3 531 aaPredicted RBP8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 DEFB126Q9BYW3 111 aa8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 VCX2Q9H322 139 aa8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 THYN1Q9P016 225 aa8.64□□□□□ -1.03
NIF3L1-204ENST00000409357 TEX50A0A1B0GTY4 177 aa8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 HIGD1CA8MV81 97 aa8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 SYNGR1O43759 233 aa8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 SP1P08047 785 aa8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 MGST1P10620 155 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 ERVK11-1P61568 191 aa8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 ZNF816Q0VGE8 651 aaPredicted RBP8.63□□□□□ -1.03
NIF3L1-204ENST00000409357 ZNF146Q15072 292 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms