RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 PARD6GQ9BYG4 376 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 MBNL3Q9NUK0 354 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 LOC105371267A0A1B0GV96 52 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 LINC00473A8K010 186 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 LEPP41159 167 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 TTC9CQ8N5M4 171 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 NRN1Q9NPD7 142 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 ALPK2Q86TB3 2170 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 TRAV41A0A0B4J266 112 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 OOSP1A8MZH6 123 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 C1QL4Q86Z23 238 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 GLMPQ8WWB7 406 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 CKS1BP61024 79 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 SRSF4Q08170 494 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 KLRD1Q13241 179 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 TMEM50AO95807 157 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 NXT2Q9NPJ8 142 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 LINC00527Q9UJ94 153 aa10.93□□□□□ -0.66
CACNA1C-222ENST00000406454 A0A1B0GW64 132 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 NDUFS8O00217 210 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 PAX8Q06710 450 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 H0YJW9 148 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 DSCR9P59020 149 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 DUSP14O95147 198 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 FBLN7Q53RD9 439 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 RPP25LQ8N5L8 163 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 JKAMPQ9P055 326 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 SMIM13P0DJ93 91 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 RLFQ13129 1914 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 MINOS1Q5TGZ0 78 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 SUMO4Q6EEV6 95 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 ZNF48Q96MX3 618 aaPredicted RBP10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 MINOS1-NBL1R4GNA1 71 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 LY6G6EA0A0G2JKS1 128 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 A0A1B0GV90 55 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 LDLRAD2Q5SZI1 272 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 TSKUQ8WUA8 353 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 ST6GALNAC6Q969X2 333 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 U3KQA8 63 aa10.92□□□□□ -0.66
CACNA1C-222ENST00000406454 A0A1B0GWJ7 208 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 CD7P09564 240 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 MGST2Q99735 147 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 GSN-AS1Q9NRJ2 163 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 TMEM242Q9NWH2 141 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 CFPP27918 469 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 PSMG4Q5JS54 123 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 TRAV12-3A0A0B4J271 114 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 SNAI2O43623 268 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 HIST1H2BKO60814 126 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 HIST1H2BJP06899 126 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 PSG1P11464 419 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 HIST1H2BOP23527 126 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 HIST1H2BBP33778 126 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 HIST1H2BDP58876 126 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 HIST1H2BCP62807 126 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 HIST2H2BEQ16778 126 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 HIST1H2BHQ93079 126 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 HIST1H2BNQ99877 126 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 HIST1H2BMQ99879 126 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 ALKBH7Q9BT30 221 aaPredicted RBP10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 ABCA4P78363 2273 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 GNLYP22749 145 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 OR10J3Q5JRS4 329 aa10.91□□□□□ -0.66
CACNA1C-222ENST00000406454 MUC4Q99102 2169 aa10.9□□□□□ -0.66
CACNA1C-222ENST00000406454 ST6GALNAC3Q8NDV1 305 aa10.9□□□□□ -0.66
CACNA1C-222ENST00000406454 GNB1LQ9BYB4 327 aa10.9□□□□□ -0.66
CACNA1C-222ENST00000406454 SEPSECSQ9HD40 501 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-222ENST00000406454 TRBV24-1A0A075B6N3 115 aa10.9□□□□□ -0.66
CACNA1C-222ENST00000406454 PEF1Q9UBV8 284 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-222ENST00000406454 C20orf204Q6ZNR8 217 aa10.9□□□□□ -0.67
CACNA1C-222ENST00000406454 NEUROG1Q92886 237 aa10.9□□□□□ -0.67
CACNA1C-222ENST00000406454 RFNGQ9Y644 331 aa10.9□□□□□ -0.67
CACNA1C-222ENST00000406454 OVOL1O14753 267 aa10.9□□□□□ -0.67
CACNA1C-222ENST00000406454 TRGV9Q99603 122 aa10.9□□□□□ -0.67
CACNA1C-222ENST00000406454 A0A0G2JRQ6 117 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 M0R1W7 72 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 C15orf32Q32M92 178 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 KIR3DL3Q8N743 410 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 TMEM190Q8WZ59 177 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 AGMATQ9BSE5 352 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 ZSWIM8A7E2V4 1837 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 CA1P00915 261 aaPredicted RBP10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 RSPO3Q9BXY4 272 aaPredicted RBP10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 ST20Q9HBF5 79 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 PKDREJQ9NTG1 2253 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 TRBV7-9A0A0J9YWB2 115 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 SIGLEC15Q6ZMC9 328 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 C2orf88Q9BSF0 95 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 CYSLTR1Q9Y271 337 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 TRGV2A0A075B6R0 118 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 PMS2P5A8MQ11 134 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 SSC4DQ8WTU2 575 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 SCRT1Q9BWW7 348 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 BUB1B-PAK6H3BSN5 160 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 PPIFP30405 207 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 ZNF562Q6V9R5 426 aa10.89□□□□□ -0.67
CACNA1C-222ENST00000406454 SLC25A39Q9BZJ4 359 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms