RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 SAP30O75446 220 aa10.05□□□□□ -0.8
SMCR8-201ENST00000406438 HOXD3P31249 432 aaPredicted RBP10.05□□□□□ -0.8
SMCR8-201ENST00000406438 GNG5P63218 68 aa10.05□□□□□ -0.8
SMCR8-201ENST00000406438 GNB1LQ9BYB4 327 aa10.05□□□□□ -0.8
SMCR8-201ENST00000406438 IGKCP01834 107 aa10.05□□□□□ -0.8
SMCR8-201ENST00000406438 C11orf44Q8N8P7 122 aa10.05□□□□□ -0.8
SMCR8-201ENST00000406438 RAMP1O60894 148 aa10.05□□□□□ -0.8
SMCR8-201ENST00000406438 CHCHD1Q96BP2 118 aaKnown RBP10.05□□□□□ -0.8
SMCR8-201ENST00000406438 ASCL4Q6XD76 172 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 C9orf106Q8NAJ2 232 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 TRAV40A0A0B4J280 105 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 FAM90A9PA6NNJ1 464 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 C18orf12Q96KH6 178 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 GATA2P23769 480 aaPredicted RBP10.04□□□□□ -0.8
SMCR8-201ENST00000406438 C3orf36Q3SXR2 165 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 GATD1Q8NB37 220 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 OVOL1O14753 267 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 SRP19P09132 144 aaKnown RBP10.04□□□□□ -0.8
SMCR8-201ENST00000406438 PRB3Q04118 309 aaPredicted RBP10.04□□□□□ -0.8
SMCR8-201ENST00000406438 TMEM190Q8WZ59 177 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 F8WEM9 126 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 ERVK11-1P61568 191 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 LINC01559Q495D7 138 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 GFI1BQ5VTD9 330 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 FNDC4Q9H6D8 234 aaPredicted RBP10.04□□□□□ -0.8
SMCR8-201ENST00000406438 NHP2Q9NX24 153 aaKnown RBP10.04□□□□□ -0.8
SMCR8-201ENST00000406438 ERVH48-1M5A8F1 160 aa10.04□□□□□ -0.8
SMCR8-201ENST00000406438 LGALS1P09382 135 aaKnown RBP10.04□□□□□ -0.8
SMCR8-201ENST00000406438 CCL3L1P16619 93 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 CD24P25063 80 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 ADMP35318 185 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 SFTA2Q6UW10 78 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 ATXN8Q156A1 80 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 TNFRSF14Q92956 283 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 TRBV7-1A0A0A6YYK4 115 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 IGHV3-64A0A075B6Q5 118 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 A0A1W2PR77 199 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 TMEM238C9JI98 176 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 TOMM40O96008 361 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 Q5BKY6 102 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 PRDM13Q9H4Q3 707 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 LAMTOR3Q9UHA4 124 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 CARHSP1Q9Y2V2 147 aaKnown RBP10.03□□□□□ -0.8
SMCR8-201ENST00000406438 TANC1Q9C0D5 1861 aa10.03□□□□□ -0.8
SMCR8-201ENST00000406438 NRN1Q9NPD7 142 aa10.02□□□□□ -0.8
SMCR8-201ENST00000406438 ARHGAP32A7KAX9 2087 aa10.02□□□□□ -0.81
SMCR8-201ENST00000406438 CD55P08174 381 aa10.02□□□□□ -0.81
SMCR8-201ENST00000406438 RPL32P62910 135 aaKnown RBP10.02□□□□□ -0.81
SMCR8-201ENST00000406438 SORL1Q92673 2214 aa10.02□□□□□ -0.81
SMCR8-201ENST00000406438 TRBV6-7A0A0A0MS04 114 aa10.02□□□□□ -0.81
SMCR8-201ENST00000406438 SERF1AO75920 110 aa10.02□□□□□ -0.81
SMCR8-201ENST00000406438 LINC00271P0C7V0 271 aa10.02□□□□□ -0.81
SMCR8-201ENST00000406438 FBLN7Q53RD9 439 aa10.02□□□□□ -0.81
SMCR8-201ENST00000406438 ZNF525Q8N782 197 aa10.02□□□□□ -0.81
SMCR8-201ENST00000406438 PRDM6Q9NQX0 595 aa10.02□□□□□ -0.81
SMCR8-201ENST00000406438 RPL23P62829 140 aaKnown RBP10.02□□□□□ -0.81
SMCR8-201ENST00000406438 RCHY1Q96PM5 261 aa10.02□□□□□ -0.81
SMCR8-201ENST00000406438 ANAPC13Q9BS18 74 aa10.02□□□□□ -0.81
SMCR8-201ENST00000406438 E9PLN8 166 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 LOC102723996A0A087X1L8 192 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 H3BUT2 72 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 ATP5L2Q7Z4Y8 100 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 GREM1O60565 184 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 C15orf32Q32M92 178 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 IMMP1LQ96LU5 166 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 PSG8Q9UQ74 426 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 MALRD1Q5VYJ5 2156 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 PAX4O43316 350 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 EFNB3Q15768 340 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 OSTCQ9NRP0 149 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 MBNL3Q9NUK0 354 aaKnown RBP10.01□□□□□ -0.81
SMCR8-201ENST00000406438 TMEM8BA6NDV4 472 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 ZNF562Q6V9R5 426 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 OVOL2Q9BRP0 275 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 NCOR1P1Q9H4R4 102 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 ERG28Q9UKR5 140 aa10.01□□□□□ -0.81
SMCR8-201ENST00000406438 NPIPB5A8MRT5 1133 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 A8MWV9 139 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 OR9G9P0C7N8 305 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 PRCDQ00LT1 54 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 ORAOV1Q8WV07 137 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 IGKV1D-43A0A0B4J1Z2 117 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10□□□□□ -0.81
SMCR8-201ENST00000406438 A0A1W2PRE2 83 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 INS-IGF2F8WCM5 200 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 INSP01308 110 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 VMO1Q7Z5L0 202 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 TIMM23O14925 209 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 ZNF124Q15973 351 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 COL4A1P02462 1669 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 A0A0U1RRA0 63 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 TRAV41A0A0B4J266 112 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 MEGF9Q9H1U4 602 aa10□□□□□ -0.81
SMCR8-201ENST00000406438 RPL35AP18077 110 aaKnown RBP9.99□□□□□ -0.81
SMCR8-201ENST00000406438 HIST1H4AP62805 103 aaKnown RBP9.99□□□□□ -0.81
SMCR8-201ENST00000406438 SRSF4Q08170 494 aaKnown RBP9.99□□□□□ -0.81
SMCR8-201ENST00000406438 WFDC12Q8WWY7 111 aa9.99□□□□□ -0.81
SMCR8-201ENST00000406438 WBP1Q96G27 269 aa9.99□□□□□ -0.81
SMCR8-201ENST00000406438 SPRR3Q9UBC9 169 aa9.99□□□□□ -0.81
SMCR8-201ENST00000406438 SPG11Q96JI7 2443 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms