RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.47□□□□□ -1.21
LINC00243-201ENST00000399196 ZANQ9Y493 2812 aa7.47□□□□□ -1.21
LINC00243-201ENST00000399196 TGFAP01135 160 aa7.47□□□□□ -1.21
LINC00243-201ENST00000399196 IGHV4-38-2P0DP08 117 aa7.47□□□□□ -1.21
LINC00243-201ENST00000399196 LOXL1Q08397 574 aaPredicted RBP7.47□□□□□ -1.21
LINC00243-201ENST00000399196 Q8N6K4 173 aa7.47□□□□□ -1.21
LINC00243-201ENST00000399196 ZNF114Q8NC26 417 aa7.47□□□□□ -1.21
LINC00243-201ENST00000399196 OR4F5Q8NH21 305 aa7.47□□□□□ -1.21
LINC00243-201ENST00000399196 OR4F4Q96R69 305 aa7.47□□□□□ -1.21
LINC00243-201ENST00000399196 SLC25A33Q9BSK2 321 aa7.47□□□□□ -1.21
LINC00243-201ENST00000399196 FAM103A1Q9BTL3 118 aaKnown RBP7.47□□□□□ -1.21
LINC00243-201ENST00000399196 A0A096LNT2 108 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 OR2C1O95371 312 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 IFNA1P01562 189 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 PSMB3P49720 205 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 RND2P52198 227 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 NDPQ00604 133 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 RHEBQ15382 184 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 FAM78BQ5VT40 261 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 OR1P1Q8NH06 330 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 RPUSD4Q96CM3 377 aaKnown RBP7.46□□□□□ -1.22
LINC00243-201ENST00000399196 MBD6Q96DN6 1003 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 TVP23CQ96ET8 276 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 Q96MF0 132 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 RASL11BQ9BPW5 248 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 SRSF8Q9BRL6 282 aaKnown RBP7.46□□□□□ -1.22
LINC00243-201ENST00000399196 NIPSNAP3BQ9BS92 247 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 GSX1Q9H4S2 264 aaPredicted RBP7.46□□□□□ -1.22
LINC00243-201ENST00000399196 SDF2L1Q9HCN8 221 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 MANBALQ9NQG1 85 aa7.46□□□□□ -1.22
LINC00243-201ENST00000399196 YTHDF2Q9Y5A9 579 aaKnown RBP7.46□□□□□ -1.22
LINC00243-201ENST00000399196 C11orf94C9JXX5 98 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 CORTO00230 105 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 RAB5AP20339 215 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 GCHFRP30047 84 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 TAS2R60P59551 318 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 CX3CL1P78423 397 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 ZNF343Q6P1L6 599 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 PATE2Q6UY27 113 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 ZNF562Q6V9R5 426 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 CYP2G1PQ6ZSU1 146 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 THAP8Q8NA92 274 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 C22orf15Q8WYQ4 148 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 ARPC1AQ92747 370 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 SSX3Q99909 188 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 DERL1Q9BUN8 251 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 PARLQ9H300 379 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 TRAV5A0A0B4J249 113 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 A0A1B0GV90 55 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 OR5G3P0C626 314 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 RAB4BP61018 213 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 RHOBP62745 196 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 ASPHD1Q5U4P2 390 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 PRSS57Q6UWY2 283 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 FAM24BQ8N5W8 94 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 FUT9Q9Y231 359 aa7.45□□□□□ -1.22
LINC00243-201ENST00000399196 F11RQ9Y624 299 aaKnown RBP7.45□□□□□ -1.22
LINC00243-201ENST00000399196 TMEM250H0YL14 139 aa7.44□□□□□ -1.22
LINC00243-201ENST00000399196 J3QLI3 93 aa7.44□□□□□ -1.22
LINC00243-201ENST00000399196 CXorf1O96002 111 aa7.44□□□□□ -1.22
LINC00243-201ENST00000399196 RD3LP0DJH9 198 aa7.44□□□□□ -1.22
LINC00243-201ENST00000399196 LBHQ53QV2 105 aaPredicted RBP7.44□□□□□ -1.22
LINC00243-201ENST00000399196 KLF17Q5JT82 389 aaPredicted RBP7.44□□□□□ -1.22
LINC00243-201ENST00000399196 DNLZQ5SXM8 178 aa7.44□□□□□ -1.22
LINC00243-201ENST00000399196 C1QL4Q86Z23 238 aa7.44□□□□□ -1.22
LINC00243-201ENST00000399196 Q8N9W7 124 aa7.44□□□□□ -1.22
LINC00243-201ENST00000399196 C14orf144Q96I85 54 aa7.44□□□□□ -1.22
LINC00243-201ENST00000399196 FAM167A-AS1Q96KT0 104 aa7.44□□□□□ -1.22
LINC00243-201ENST00000399196 UHRF2Q96PU4 802 aa7.44□□□□□ -1.22
LINC00243-201ENST00000399196 SMIM7Q9BQ49 75 aa7.44□□□□□ -1.22
LINC00243-201ENST00000399196 WNT10AQ9GZT5 417 aa7.44□□□□□ -1.22
LINC00243-201ENST00000399196 DOK5Q9P104 306 aa7.44□□□□□ -1.22
LINC00243-201ENST00000399196 TRBV20OR9-2A0A075B6H5 130 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 TCRBV4S1A1TA0A5B7 111 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 I3L2K1 104 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 MT-CO2P00403 227 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 AVPP01185 164 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 S100A2P29034 98 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 CST9LP1Q5W188 147 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 OR1L6Q8NGR2 347 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 A0A087WWC5 75 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 SCO2A0A1W2PP80 73 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 HLA-DRB1P01911 266 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 OR10J4P0C629 311 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 IGHV4-31P0DP07 118 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 HOXA5P20719 270 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 RPL23P62829 140 aaKnown RBP7.43□□□□□ -1.22
LINC00243-201ENST00000399196 TMEM219Q86XT9 240 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 TMEM116Q8NCL8 245 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 SLC25A2Q9BXI2 301 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 MEGF9Q9H1U4 602 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 SOX21Q9Y651 276 aaPredicted RBP7.43□□□□□ -1.22
LINC00243-201ENST00000399196 CREBBPQ92793 2442 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 BAHCC1Q9P281 2608 aa7.43□□□□□ -1.22
LINC00243-201ENST00000399196 IGHV7-81A0A0B4J1V7 117 aa7.42□□□□□ -1.22
LINC00243-201ENST00000399196 K7EIM0 57 aa7.42□□□□□ -1.22
LINC00243-201ENST00000399196 NDUFB4O95168 129 aa7.42□□□□□ -1.22
LINC00243-201ENST00000399196 CXCL1P09341 107 aa7.42□□□□□ -1.22
LINC00243-201ENST00000399196 EGR2P11161 476 aaPredicted RBP7.42□□□□□ -1.22
LINC00243-201ENST00000399196 PYY3Q5JQD4 70 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms