RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 LINC00205P59089 165 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 TNFRSF14Q92956 283 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 SDK2Q58EX2 2172 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 E7EQL1 145 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 APOMO95445 188 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 ASCL2Q99929 193 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 SYNJ2BPP57105 145 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 GAFA1Q96PS6 74 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 EPDR1Q9UM22 224 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 PLP1P60201 277 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 VWA8A3KMH1 1905 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 SRRM4A7MD48 611 aaKnown RBP9.33□□□□□ -0.92
TTC28-201ENST00000397906 BMPERQ8N8U9 685 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 NXT2Q9NPJ8 142 aaKnown RBP9.33□□□□□ -0.92
TTC28-201ENST00000397906 IGKV1-12A0A0C4DH73 117 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 C5orf63A6NC05 138 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 IGKV1D-12P01611 117 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 GZMBP10144 247 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 CD8AP01732 235 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 PSG1P11464 419 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 MSMBP08118 114 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 SFTA2Q6UW10 78 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 HEPN1Q6WQI6 88 aa9.33□□□□□ -0.92
TTC28-201ENST00000397906 YLPM1P49750 1951 aaKnown RBP9.32□□□□□ -0.92
TTC28-201ENST00000397906 TRAV3A0A0B4J244 114 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 MINOS1Q5TGZ0 78 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 MINOS1-NBL1R4GNA1 71 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 DPRXA6NFQ7 191 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 LYPD3O95274 346 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 SMIM13P0DJ93 91 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 CCL1P22362 96 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 IGKV1D-8A0A087WSZ0 117 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 TCF23Q7RTU1 214 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 FAM186AA6NE01 2351 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 M0R1W7 72 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 SLC25A20O43772 301 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 CFHR3Q02985 330 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 SRSF4Q08170 494 aaKnown RBP9.32□□□□□ -0.92
TTC28-201ENST00000397906 PMCHL2Q9BQD1 86 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 H0YJW9 148 aa9.32□□□□□ -0.92
TTC28-201ENST00000397906 CA1P00915 261 aaPredicted RBP9.32□□□□□ -0.92
TTC28-201ENST00000397906 C17orf82Q86X59 251 aaPredicted RBP9.32□□□□□ -0.92
TTC28-201ENST00000397906 VENTXO95231 258 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 COTL1Q14019 142 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 MRAPQ8TCY5 172 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 ZNRD1Q9P1U0 126 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 TDGF1P3P51864 188 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 C14orf144Q96I85 54 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 UQCR10Q9UDW1 63 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 EFNB3Q15768 340 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 PSG8Q9UQ74 426 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 CKS1BP61024 79 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 SLC25A48Q6ZT89 311 aaKnown RBP9.31□□□□□ -0.92
TTC28-201ENST00000397906 PRSS33Q8NF86 280 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 GBF1Q92538 1859 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 PGPEP1LA6NFU8 196 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 OVOL1O14753 267 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 TRBV7-1A0A0A6YYK4 115 aa9.31□□□□□ -0.92
TTC28-201ENST00000397906 IGKV1D-17A0A075B6S4 117 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 IGHV4-39P01824 125 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 C1orf122Q6ZSJ8 110 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 Q8TAT8 98 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 OVOL3O00110 214 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 CXorf65A6NEN9 183 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 TMEM249Q2WGJ8 235 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 IZUMO1RA6ND01 250 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 Q6AWC8 147 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 DMRTA1Q5VZB9 504 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
TTC28-201ENST00000397906 GAS1P54826 345 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 NR2C2APQ86WQ0 139 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 B3GALT5-AS1P59052 145 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 C5orf64Q2M2E5 130 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 NHLRC3Q5JS37 347 aa9.3□□□□□ -0.92
TTC28-201ENST00000397906 FRMPD3Q5JV73 1810 aa9.29□□□□□ -0.92
TTC28-201ENST00000397906 SRSF1Q07955 248 aaKnown RBP eCLIP9.29□□□□□ -0.92
TTC28-201ENST00000397906 SDHCQ99643 169 aaPredicted RBP9.29□□□□□ -0.92
TTC28-201ENST00000397906 KIF26BQ2KJY2 2108 aa9.29□□□□□ -0.92
TTC28-201ENST00000397906 CST9LQ9H4G1 147 aa9.29□□□□□ -0.92
TTC28-201ENST00000397906 VSIRQ9H7M9 311 aa9.29□□□□□ -0.92
TTC28-201ENST00000397906 TYMSP04818 313 aa9.29□□□□□ -0.92
TTC28-201ENST00000397906 SPATA31B1PQ5VZV4 182 aa9.29□□□□□ -0.92
TTC28-201ENST00000397906 CR1LQ2VPA4 569 aa9.29□□□□□ -0.92
TTC28-201ENST00000397906 ZNF581Q9P0T4 197 aa9.29□□□□□ -0.92
TTC28-201ENST00000397906 S100A7L2Q5SY68 101 aa9.28□□□□□ -0.92
TTC28-201ENST00000397906 TP53BP1Q12888 1972 aaPredicted RBP9.28□□□□□ -0.92
TTC28-201ENST00000397906 INTS1Q8N201 2190 aaKnown RBP9.28□□□□□ -0.92
TTC28-201ENST00000397906 COQ2Q96H96 371 aa9.28□□□□□ -0.92
TTC28-201ENST00000397906 INSP01308 110 aa9.28□□□□□ -0.92
TTC28-201ENST00000397906 IGHG3P01860 377 aa9.28□□□□□ -0.92
TTC28-201ENST00000397906 LINC00158P58513 81 aa9.28□□□□□ -0.92
TTC28-201ENST00000397906 FANCMQ8IYD8 2048 aa9.28□□□□□ -0.92
TTC28-201ENST00000397906 TRAV2A0A0B4J234 112 aa9.28□□□□□ -0.92
TTC28-201ENST00000397906 FAM223BA6NKX1 122 aa9.28□□□□□ -0.92
TTC28-201ENST00000397906 FAM223AQ8IWN6 122 aa9.28□□□□□ -0.92
TTC28-201ENST00000397906 RHPN1-AS1Q9BWJ2 59 aa9.28□□□□□ -0.92
TTC28-201ENST00000397906 HEATR1Q9H583 2144 aaKnown RBP9.28□□□□□ -0.92
TTC28-201ENST00000397906 PEF1Q9UBV8 284 aaKnown RBP9.28□□□□□ -0.92
TTC28-201ENST00000397906 CYSLTR1Q9Y271 337 aa9.28□□□□□ -0.92
TTC28-201ENST00000397906 NDUFS8O00217 210 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms