RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 OR2K2Q8NGT1 345 aa12.95□□□□□ -0.34
CHMP1A-201ENST00000397901 PRNDQ9UKY0 176 aa12.95□□□□□ -0.34
CHMP1A-201ENST00000397901 PROCRQ9UNN8 238 aa12.95□□□□□ -0.34
CHMP1A-201ENST00000397901 IGHV1-24A0A0C4DH33 117 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 SH2D7A6NKC9 451 aaPredicted RBP12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 APOA2P02652 100 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 COX8AP10176 69 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 PLP1P60201 277 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 PRCDQ00LT1 54 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 LINC00173Q6ZV60 143 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 NUP35Q8NFH5 326 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 FAM168AQ92567 244 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 MBD6Q96DN6 1003 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 GRAMD2BQ96HH9 432 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 JMJD8Q96S16 334 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 SSBP3Q9BWW4 388 aaPredicted RBP12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 PLSCR4Q9NRQ2 329 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 JKAMPQ9P055 326 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 TRAV5A0A0B4J249 113 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 TRAV17A0A0B4J275 112 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 AZU1P20160 251 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 OR10W1Q8NGF6 305 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 LINC00479Q96M42 142 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 MAP1LC3CQ9BXW4 147 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 NPFFR1Q9GZQ6 430 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 SLC25A15Q9Y619 301 aa12.94□□□□□ -0.34
CHMP1A-201ENST00000397901 BOD1L1Q8NFC6 3051 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 UPK2O00526 184 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 OR5AL1P0C617 328 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 HIST1H1EP10412 219 aaKnown RBP12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 CFHR2P36980 270 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 MORN5Q5VZ52 161 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 RND1Q92730 232 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 ATP6V0BQ99437 205 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 SIGMAR1Q99720 223 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 SSBP4Q9BWG4 385 aaPredicted RBP12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 TEX50A0A1B0GTY4 177 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 H3BUT2 72 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 LHBP01229 141 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 FAM231DQ6ZW35 169 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 OR10AG1Q8NH19 301 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 SNRNP40Q96DI7 357 aaKnown RBP12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 ADTRPQ96IZ2 230 aa12.93□□□□□ -0.34
CHMP1A-201ENST00000397901 FNDC10F2Z333 226 aa12.92□□□□□ -0.34
CHMP1A-201ENST00000397901 CT45A6P0DMU7 189 aa12.92□□□□□ -0.34
CHMP1A-201ENST00000397901 CT45A5P0DMU8 189 aa12.92□□□□□ -0.34
CHMP1A-201ENST00000397901 CT45A7P0DMV0 189 aa12.92□□□□□ -0.34
CHMP1A-201ENST00000397901 TAS2R45P59539 299 aa12.92□□□□□ -0.34
CHMP1A-201ENST00000397901 SCGB2A2Q13296 93 aa12.92□□□□□ -0.34
CHMP1A-201ENST00000397901 ATP5L2Q7Z4Y8 100 aa12.92□□□□□ -0.34
CHMP1A-201ENST00000397901 WFDC12Q8WWY7 111 aa12.92□□□□□ -0.34
CHMP1A-201ENST00000397901 DSCAML1Q8TD84 2053 aa12.92□□□□□ -0.34
CHMP1A-201ENST00000397901 CNOT1A5YKK6 2376 aaKnown RBP12.92□□□□□ -0.34
CHMP1A-201ENST00000397901 PPIAL4EA0A075B759 164 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 PPIAL4CA0A0B4J2A2 164 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 PPIAL4FP0DN26 164 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 DEFB109BQ30KR1 87 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 FAM216BQ8N7L0 139 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 H1FXQ92522 213 aaKnown RBP12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 CCL13Q99616 98 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 CEACAM4O75871 244 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 LIPFP07098 398 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 C8orf88P0DMB2 117 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 UBE2L3P68036 154 aaKnown RBP12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 POU2AF1Q16633 256 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 SLC25A33Q9BSK2 321 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 ZNF355PQ9NSJ1 428 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 PLCE1Q9P212 2302 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 ARFGEF3Q5TH69 2177 aa12.91□□□□□ -0.34
CHMP1A-201ENST00000397901 A0A0G2JLM5 398 aa12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 SAA1P0DJI8 122 aaPredicted RBP12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 RNASE2P10153 161 aaKnown RBP12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 UQCRFS1P47985 274 aa12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 CAMPP49913 170 aa12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 RTL8BQ17RB0 113 aa12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 VSTM2AQ8TAG5 236 aa12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 DKK4Q9UBT3 224 aa12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 ZNF257Q9Y2Q1 563 aa12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 SMG1Q96Q15 3661 aaKnown RBP12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 RP1L1Q8IWN7 2480 aaPredicted RBP12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 A0A1W2PRE2 83 aa12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 PSMB11A5LHX3 300 aa12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 SSBP2P81877 361 aaPredicted RBP12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 RAB9BQ9NP90 201 aa12.9□□□□□ -0.34
CHMP1A-201ENST00000397901 CUL9Q8IWT3 2517 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 IGHV3-48P01763 117 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 PYYP10082 97 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 TCF15Q12870 199 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 C2orf83Q53S99 150 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 OR4A5Q8NH83 315 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 SLC25A2Q9BXI2 301 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 GTSF1LQ9H1H1 148 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 TANC2Q9HCD6 1990 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 LAMA5O15230 3695 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 A0A1B0GXF2 115 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 CD69Q07108 199 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 SMAGPQ0VAQ4 97 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 SSX8Q7RTT4 187 aa12.89□□□□□ -0.35
CHMP1A-201ENST00000397901 GAFA1Q96PS6 74 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms