RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 TEP1Q99973 2627 aaKnown RBP11.74□□□□□ -0.53
CAPN3-207ENST00000397200 SRSF8Q9BRL6 282 aaKnown RBP11.74□□□□□ -0.53
CAPN3-207ENST00000397200 CTDSP1Q9GZU7 261 aa11.74□□□□□ -0.53
CAPN3-207ENST00000397200 FUT9Q9Y231 359 aa11.74□□□□□ -0.53
CAPN3-207ENST00000397200 IGKV1D-37A0A075B6S9 117 aa11.73□□□□□ -0.53
CAPN3-207ENST00000397200 FCN1O00602 326 aa11.73□□□□□ -0.53
CAPN3-207ENST00000397200 HLA-DRB1P01911 266 aa11.73□□□□□ -0.53
CAPN3-207ENST00000397200 AMY1AP04745 511 aa11.73□□□□□ -0.53
CAPN3-207ENST00000397200 RNASE1P07998 156 aaKnown RBP11.73□□□□□ -0.53
CAPN3-207ENST00000397200 ATP5G3P48201 142 aa11.73□□□□□ -0.53
CAPN3-207ENST00000397200 RPL23P62829 140 aaKnown RBP11.73□□□□□ -0.53
CAPN3-207ENST00000397200 GNB1P62873 340 aa11.73□□□□□ -0.53
CAPN3-207ENST00000397200 ELOBQ15370 118 aa11.73□□□□□ -0.53
CAPN3-207ENST00000397200 TNXAQ16473 311 aa11.73□□□□□ -0.53
CAPN3-207ENST00000397200 TMEM241Q24JQ0 296 aa11.73□□□□□ -0.53
CAPN3-207ENST00000397200 C9orf152Q5JTZ5 239 aa11.73□□□□□ -0.53
CAPN3-207ENST00000397200 C1QL4Q86Z23 238 aa11.73□□□□□ -0.53
CAPN3-207ENST00000397200 NPFFR1Q9GZQ6 430 aa11.73□□□□□ -0.53
CAPN3-207ENST00000397200 PRELID1Q9Y255 219 aa11.73□□□□□ -0.53
CAPN3-207ENST00000397200 SH2D7A6NKC9 451 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-207ENST00000397200 CLN5O75503 358 aa11.72□□□□□ -0.53
CAPN3-207ENST00000397200 CNIH1O95406 144 aa11.72□□□□□ -0.53
CAPN3-207ENST00000397200 MT-CO2P00403 227 aa11.72□□□□□ -0.53
CAPN3-207ENST00000397200 MFAP2P55001 183 aa11.72□□□□□ -0.53
CAPN3-207ENST00000397200 RPUSD4Q96CM3 377 aaKnown RBP11.72□□□□□ -0.53
CAPN3-207ENST00000397200 RNF2Q99496 336 aa11.72□□□□□ -0.53
CAPN3-207ENST00000397200 MRPL32Q9BYC8 188 aaKnown RBP11.72□□□□□ -0.53
CAPN3-207ENST00000397200 DOK5Q9P104 306 aa11.72□□□□□ -0.53
CAPN3-207ENST00000397200 PLXNB1O43157 2135 aa11.72□□□□□ -0.53
CAPN3-207ENST00000397200 TCRBV4S1A1TA0A5B7 111 aa11.71□□□□□ -0.53
CAPN3-207ENST00000397200 FAM181BA6NEQ2 426 aa11.71□□□□□ -0.53
CAPN3-207ENST00000397200 CORTO00230 105 aa11.71□□□□□ -0.53
CAPN3-207ENST00000397200 RAB5BP61020 215 aa11.71□□□□□ -0.53
CAPN3-207ENST00000397200 BLCAPP62952 87 aa11.71□□□□□ -0.53
CAPN3-207ENST00000397200 FAM78BQ5VT40 261 aa11.71□□□□□ -0.53
CAPN3-207ENST00000397200 ZNF562Q6V9R5 426 aa11.71□□□□□ -0.53
CAPN3-207ENST00000397200 MIR17HGQ75NE6 70 aa11.71□□□□□ -0.53
CAPN3-207ENST00000397200 OR1P1Q8NH06 330 aa11.71□□□□□ -0.53
CAPN3-207ENST00000397200 OR2T6Q8NHC8 308 aa11.71□□□□□ -0.53
CAPN3-207ENST00000397200 Q8WTZ3 238 aa11.71□□□□□ -0.53
CAPN3-207ENST00000397200 C11orf52Q96A22 123 aa11.71□□□□□ -0.53
CAPN3-207ENST00000397200 CUBNO60494 3623 aa11.71□□□□□ -0.54
CAPN3-207ENST00000397200 IGHV7-81A0A0B4J1V7 117 aa11.71□□□□□ -0.54
CAPN3-207ENST00000397200 C1orf196B1AJZ1 125 aa11.71□□□□□ -0.54
CAPN3-207ENST00000397200 AREGP15514 252 aa11.71□□□□□ -0.54
CAPN3-207ENST00000397200 SELENOTP62341 195 aa11.71□□□□□ -0.54
CAPN3-207ENST00000397200 CX3CL1P78423 397 aa11.71□□□□□ -0.54
CAPN3-207ENST00000397200 FXYD3Q14802 87 aa11.71□□□□□ -0.54
CAPN3-207ENST00000397200 ETFRF1Q6IPR1 90 aa11.71□□□□□ -0.54
CAPN3-207ENST00000397200 ZNF503Q96F45 646 aa11.71□□□□□ -0.54
CAPN3-207ENST00000397200 HSPB9Q9BQS6 159 aa11.71□□□□□ -0.54
CAPN3-207ENST00000397200 TECRQ9NZ01 308 aaKnown RBP11.71□□□□□ -0.54
CAPN3-207ENST00000397200 MRPL36Q9P0J6 103 aaKnown RBP11.71□□□□□ -0.54
CAPN3-207ENST00000397200 YTHDF2Q9Y5A9 579 aaKnown RBP11.71□□□□□ -0.54
CAPN3-207ENST00000397200 F11RQ9Y624 299 aaKnown RBP11.71□□□□□ -0.54
CAPN3-207ENST00000397200 TSPAN9O75954 239 aa11.7□□□□□ -0.54
CAPN3-207ENST00000397200 UBE2G2P60604 165 aa11.7□□□□□ -0.54
CAPN3-207ENST00000397200 RPL15P61313 204 aaKnown RBP11.7□□□□□ -0.54
CAPN3-207ENST00000397200 ZNF674Q2M3X9 581 aa11.7□□□□□ -0.54
CAPN3-207ENST00000397200 SMUG1Q53HV7 270 aa11.7□□□□□ -0.54
CAPN3-207ENST00000397200 ZNF343Q6P1L6 599 aa11.7□□□□□ -0.54
CAPN3-207ENST00000397200 PQLC2Q6ZP29 291 aa11.7□□□□□ -0.54
CAPN3-207ENST00000397200 SRSF12Q8WXF0 261 aaKnown RBP11.7□□□□□ -0.54
CAPN3-207ENST00000397200 TMEM37Q8WXS4 190 aa11.7□□□□□ -0.54
CAPN3-207ENST00000397200 ARPC1AQ92747 370 aa11.7□□□□□ -0.54
CAPN3-207ENST00000397200 ACY3Q96HD9 319 aa11.7□□□□□ -0.54
CAPN3-207ENST00000397200 PRSS22Q9GZN4 317 aa11.7□□□□□ -0.54
CAPN3-207ENST00000397200 TMEM167BQ9NRX6 74 aa11.7□□□□□ -0.54
CAPN3-207ENST00000397200 REG1AP05451 166 aa11.69□□□□□ -0.54
CAPN3-207ENST00000397200 CXCL1P09341 107 aa11.69□□□□□ -0.54
CAPN3-207ENST00000397200 GATA2P23769 480 aaPredicted RBP11.69□□□□□ -0.54
CAPN3-207ENST00000397200 TAS2R45P59539 299 aa11.69□□□□□ -0.54
CAPN3-207ENST00000397200 ADIRFQ15847 76 aa11.69□□□□□ -0.54
CAPN3-207ENST00000397200 CST9LP1Q5W188 147 aa11.69□□□□□ -0.54
CAPN3-207ENST00000397200 TMEM116Q8NCL8 245 aa11.69□□□□□ -0.54
CAPN3-207ENST00000397200 OR51G1Q8NGK1 321 aa11.69□□□□□ -0.54
CAPN3-207ENST00000397200 NPIPB3Q92617 1050 aa11.69□□□□□ -0.54
CAPN3-207ENST00000397200 BIN3Q9NQY0 253 aa11.69□□□□□ -0.54
CAPN3-207ENST00000397200 IGHG2P01859 326 aa11.68□□□□□ -0.54
CAPN3-207ENST00000397200 NDPQ00604 133 aa11.68□□□□□ -0.54
CAPN3-207ENST00000397200 FAM167A-AS1Q96KT0 104 aa11.68□□□□□ -0.54
CAPN3-207ENST00000397200 PFDN5Q99471 154 aa11.68□□□□□ -0.54
CAPN3-207ENST00000397200 TRGV9Q99603 122 aa11.68□□□□□ -0.54
CAPN3-207ENST00000397200 TRBV24-1A0A075B6N3 115 aa11.68□□□□□ -0.54
CAPN3-207ENST00000397200 C8orf88P0DMB2 117 aa11.68□□□□□ -0.54
CAPN3-207ENST00000397200 Q6ZS46 218 aa11.68□□□□□ -0.54
CAPN3-207ENST00000397200 OR1L4Q8NGR5 311 aa11.68□□□□□ -0.54
CAPN3-207ENST00000397200 FAM103A1Q9BTL3 118 aaKnown RBP11.68□□□□□ -0.54
CAPN3-207ENST00000397200 ZNF702PQ9H963 129 aa11.68□□□□□ -0.54
CAPN3-207ENST00000397200 DMRT1Q9Y5R6 373 aa11.68□□□□□ -0.54
CAPN3-207ENST00000397200 LINC01548A6NM66 108 aa11.67□□□□□ -0.54
CAPN3-207ENST00000397200 ATP6V0E1O15342 81 aa11.67□□□□□ -0.54
CAPN3-207ENST00000397200 NDUFB4O95168 129 aa11.67□□□□□ -0.54
CAPN3-207ENST00000397200 LINC01551Q86U37 167 aa11.67□□□□□ -0.54
CAPN3-207ENST00000397200 ANAPC16Q96DE5 110 aa11.67□□□□□ -0.54
CAPN3-207ENST00000397200 PYGO2Q9BRQ0 406 aa11.67□□□□□ -0.54
CAPN3-207ENST00000397200 DNAJC4Q9NNZ3 241 aa11.67□□□□□ -0.54
CAPN3-207ENST00000397200 NIPBLQ6KC79 2804 aaeCLIP11.66□□□□□ -0.54
CAPN3-207ENST00000397200 TGIF2-C20orf24A0A0A6YYL0 155 aa11.66□□□□□ -0.54
CAPN3-207ENST00000397200 SCO2A0A1W2PP80 73 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms