RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 OR1B1Q8NGR6 318 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 WFDC12Q8WWY7 111 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 AP1S3Q96PC3 154 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 CHRDL1Q9BU40 450 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 COMMD5Q9GZQ3 224 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 TMEM191AQ9H0A3 160 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 HILPDAQ9Y5L2 63 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 TRAV8-1A0A0A6YYK1 113 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 HIST1H1EP10412 219 aaKnown RBP7.98□□□□□ -1.13
TRIM39-203ENST00000396547 TMEM177Q53S58 311 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 TEX45Q8NA69 505 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 FOXA2Q9Y261 457 aaPredicted RBP7.98□□□□□ -1.13
TRIM39-203ENST00000396547 C21orf140B9A014 251 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 KLK10O43240 276 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 HBBP68871 147 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 ZNF329Q86UD4 541 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 FAM90A1Q86YD7 464 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 PRR7Q8TB68 274 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 SARAFQ96BY9 339 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 FAM167A-AS1Q96KT0 104 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 MAP1LC3CQ9BXW4 147 aa7.98□□□□□ -1.13
TRIM39-203ENST00000396547 GAGE10A6NGK3 116 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 E7EUB6 86 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 P01737 135 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 ARF6P62330 175 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 LINC00305Q7Z4B0 112 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 S100A7AQ86SG5 101 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 GCSAMQ8N6F7 178 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 CCL13Q99616 98 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 TMUB1Q9BVT8 246 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 PRNDQ9UKY0 176 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 SPENQ96T58 3664 aaKnown RBP7.97□□□□□ -1.13
TRIM39-203ENST00000396547 LOC389332A0A1B0GUA5 103 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 FAM90A9PA6NNJ1 464 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 SAA1P0DJI8 122 aaPredicted RBP7.97□□□□□ -1.13
TRIM39-203ENST00000396547 HCP5Q6MZN7 132 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 PDPNQ86YL7 162 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 MBD6Q96DN6 1003 aa7.97□□□□□ -1.13
TRIM39-203ENST00000396547 C7orf71A4D174 169 aa7.96□□□□□ -1.13
TRIM39-203ENST00000396547 UPK2O00526 184 aa7.96□□□□□ -1.13
TRIM39-203ENST00000396547 CD69Q07108 199 aa7.96□□□□□ -1.13
TRIM39-203ENST00000396547 C12orf54Q6X4T0 127 aa7.96□□□□□ -1.13
TRIM39-203ENST00000396547 Q71RC1 249 aaPredicted RBP7.96□□□□□ -1.13
TRIM39-203ENST00000396547 OR8A1Q8NGG7 326 aa7.96□□□□□ -1.13
TRIM39-203ENST00000396547 DDB2Q92466 427 aa7.96□□□□□ -1.13
TRIM39-203ENST00000396547 ST20Q9HBF5 79 aa7.96□□□□□ -1.13
TRIM39-203ENST00000396547 SMG1Q96Q15 3661 aaKnown RBP7.96□□□□□ -1.14
TRIM39-203ENST00000396547 MGAQ8IWI9 3026 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 A0A1W2PRD5 423 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 A0A1W2PRF3 423 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 A0A1W2PRM7 423 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 RNASE2P10153 161 aaKnown RBP7.96□□□□□ -1.14
TRIM39-203ENST00000396547 HTR1DP28221 377 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 KIR2DS2P43631 304 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 ERHP84090 104 aaKnown RBP7.96□□□□□ -1.14
TRIM39-203ENST00000396547 PRCDQ00LT1 54 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 TM4SF20Q53R12 229 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 INO80CQ6PI98 192 aaPredicted RBP7.96□□□□□ -1.14
TRIM39-203ENST00000396547 ITLN1Q8WWA0 313 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 HARBI1Q96MB7 349 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 SPTBN4Q9H254 2564 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 C9orf172C9J069 976 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 K7ERU9 68 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 GPR183P32249 361 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 RTL8BQ17RB0 113 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 C17orf58Q2M2W7 97 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 PATE2Q6UY27 113 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 DEFB125Q8N687 156 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 FAM216BQ8N7L0 139 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 GTSF1Q8WW33 167 aa7.96□□□□□ -1.14
TRIM39-203ENST00000396547 MRPL36Q9P0J6 103 aaKnown RBP7.96□□□□□ -1.14
TRIM39-203ENST00000396547 PCSK5Q92824 1860 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 hADV38S2A0JD32 116 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 FAM231BA6NCW3 169 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 PRB3Q04118 309 aaPredicted RBP7.95□□□□□ -1.14
TRIM39-203ENST00000396547 KLF5Q13887 457 aaPredicted RBP7.95□□□□□ -1.14
TRIM39-203ENST00000396547 BHLHA15Q7RTS1 189 aaPredicted RBP7.95□□□□□ -1.14
TRIM39-203ENST00000396547 BPIFA4PQ86YQ2 179 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 CIARTQ8N365 385 aaPredicted RBP7.95□□□□□ -1.14
TRIM39-203ENST00000396547 EPDR1Q9UM22 224 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 SERTM2A0A1B0GWG4 89 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 H3BUT2 72 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 GOSR1O95249 250 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 CT45A6P0DMU7 189 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 CT45A5P0DMU8 189 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 CT45A7P0DMV0 189 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 COL8A1P27658 744 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 MSMPQ1L6U9 139 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 FAM120AOSQ5T036 256 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 WFDC3Q8IUB2 231 aa7.95□□□□□ -1.14
TRIM39-203ENST00000396547 RPP21Q9H633 154 aaKnown RBP7.95□□□□□ -1.14
TRIM39-203ENST00000396547 IGHV3-72A0A0B4J1Y9 119 aa7.94□□□□□ -1.14
TRIM39-203ENST00000396547 A8MWL6 223 aa7.94□□□□□ -1.14
TRIM39-203ENST00000396547 M0R1B8 84 aa7.94□□□□□ -1.14
TRIM39-203ENST00000396547 ENSAO43768 121 aaKnown RBP7.94□□□□□ -1.14
TRIM39-203ENST00000396547 PRNTQ86SH4 94 aa7.94□□□□□ -1.14
TRIM39-203ENST00000396547 CSTL1Q9H114 145 aa7.94□□□□□ -1.14
TRIM39-203ENST00000396547 FBLL1A6NHQ2 334 aaKnown RBP7.94□□□□□ -1.14
TRIM39-203ENST00000396547 HLA-DRB1P01911 266 aa7.94□□□□□ -1.14
TRIM39-203ENST00000396547 OR5AL1P0C617 328 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms