RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 OR4S2Q8NH73 311 aa9.63□□□□□ -0.87
VCPKMT-201ENST00000395859 AIFM2Q9BRQ8 373 aa9.63□□□□□ -0.87
VCPKMT-201ENST00000395859 NMES1Q9C002 83 aa9.63□□□□□ -0.87
VCPKMT-201ENST00000395859 FXYD6Q9H0Q3 95 aa9.63□□□□□ -0.87
VCPKMT-201ENST00000395859 VSIRQ9H7M9 311 aa9.63□□□□□ -0.87
VCPKMT-201ENST00000395859 NAA60Q9H7X0 242 aa9.63□□□□□ -0.87
VCPKMT-201ENST00000395859 THYN1Q9P016 225 aa9.63□□□□□ -0.87
VCPKMT-201ENST00000395859 TEX13DA0A0J9YY54 714 aaPredicted RBP9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 BOLA2-SMG1P6H3BVE0 249 aa9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 PET100P0DJ07 73 aa9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 CXCL3P19876 107 aa9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 EIF4EBP1Q13541 118 aaPredicted RBP9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 GSG1LQ6UXU4 331 aa9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 TCF24Q7RTU0 167 aa9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 OR2T35Q8NGX2 323 aa9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 SCARB1Q8WTV0 552 aa9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 TMEM230Q96A57 120 aa9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 SRSF8Q9BRL6 282 aaKnown RBP9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 COMMD9Q9P000 198 aa9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 MDFICQ9P1T7 246 aa9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 TMED3Q9Y3Q3 217 aa9.62□□□□□ -0.87
VCPKMT-201ENST00000395859 HRASP01112 189 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 CD5P06127 495 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 SPART-AS1P0CW21 52 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 GNRHRP30968 328 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 SUPT4H1P63272 117 aaKnown RBP9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 PAFAH1B2P68402 229 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 SERTAD4-AS1Q5TG53 156 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 TMEM88Q6PEY1 159 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 LGI3Q8N145 548 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 TCTEX1D2Q8WW35 142 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 ZNF503Q96F45 646 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 NEU1Q99519 415 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 KRTAP1-5Q9BYS1 174 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 SLC5A7Q9GZV3 580 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 BET1LQ9NYM9 111 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 C21orf62Q9NYP8 219 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 DKK2Q9UBU2 259 aa9.61□□□□□ -0.87
VCPKMT-201ENST00000395859 LRP2P98164 4655 aa9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 IGHV3OR16-13A0A075B7E8 117 aa9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 IGHV3-74A0A0B4J1X5 117 aa9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 IGKV1D-13A0A0B4J2D9 117 aa9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 KNCNA6PVL3 124 aa9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 KRTAP29-1A8MX34 341 aaPredicted RBP9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 K7EIM0 57 aa9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 NUPL2O15504 423 aaKnown RBP9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 ATG12O94817 140 aa9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 IGKV1-13P0DP09 117 aa9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 OR2B11Q5JQS5 317 aa9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 ZNF705AQ6ZN79 300 aaPredicted RBP9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 ST8SIA2Q92186 375 aa9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 TMEM56Q96MV1 263 aa9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 CACFD1Q9UGQ2 172 aa9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 TMEM56-RWDD3S4R434 201 aa9.6□□□□□ -0.87
VCPKMT-201ENST00000395859 TRAV14DV4A0A0A6YYC5 116 aa9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 C3orf85A0A1B0GTC6 90 aa9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 ZNF705FA8MVS1 300 aaPredicted RBP9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 GOSR2O14653 212 aa9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 CDS2O95674 445 aa9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 APOHP02749 345 aaPredicted RBP9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 ZNF705DP0CH99 300 aaPredicted RBP9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 ZNF705BP0CI00 300 aaPredicted RBP9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 SLC25A4P12235 298 aa9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 SLC25A6P12236 298 aa9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 UCP1P25874 307 aa9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 H2BFSP57053 126 aa9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 FXYD4P59646 89 aa9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 GRAMD2BQ96HH9 432 aa9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 C2orf50Q96LR7 162 aa9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 PDCD10Q9BUL8 212 aa9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 TMEM222Q9H0R3 208 aa9.59□□□□□ -0.87
VCPKMT-201ENST00000395859 IGHV3-21A0A0B4J1V1 117 aa9.58□□□□□ -0.88
VCPKMT-201ENST00000395859 K7EQG2 157 aa9.58□□□□□ -0.88
VCPKMT-201ENST00000395859 RBFOX2O43251 390 aaKnown RBP eCLIP9.58□□□□□ -0.88
VCPKMT-201ENST00000395859 F2RP25116 425 aa9.58□□□□□ -0.88
VCPKMT-201ENST00000395859 WT1-ASQ06250 92 aa9.58□□□□□ -0.88
VCPKMT-201ENST00000395859 CD300CQ08708 224 aa9.58□□□□□ -0.88
VCPKMT-201ENST00000395859 CATR1Q13166 79 aa9.58□□□□□ -0.88
VCPKMT-201ENST00000395859 ZNF345Q14585 488 aa9.58□□□□□ -0.88
VCPKMT-201ENST00000395859 C15orf53Q8NAA6 179 aa9.58□□□□□ -0.88
VCPKMT-201ENST00000395859 OR10W1Q8NGF6 305 aa9.58□□□□□ -0.88
VCPKMT-201ENST00000395859 SECTM1Q8WVN6 248 aa9.58□□□□□ -0.88
VCPKMT-201ENST00000395859 C17orf77Q96MU5 243 aa9.58□□□□□ -0.88
VCPKMT-201ENST00000395859 NIPSNAP3BQ9BS92 247 aa9.58□□□□□ -0.88
VCPKMT-201ENST00000395859 TRAV3A0A0B4J244 114 aa9.57□□□□□ -0.88
VCPKMT-201ENST00000395859 TMEM189A5PLL7 270 aa9.57□□□□□ -0.88
VCPKMT-201ENST00000395859 SERPINE2P07093 398 aa9.57□□□□□ -0.88
VCPKMT-201ENST00000395859 FGF2P09038 288 aa9.57□□□□□ -0.88
VCPKMT-201ENST00000395859 ZNF818PQ6ZRF7 136 aa9.57□□□□□ -0.88
VCPKMT-201ENST00000395859 FAM219AQ8IW50 185 aa9.57□□□□□ -0.88
VCPKMT-201ENST00000395859 SPAG16Q8N0X2 631 aa9.57□□□□□ -0.88
VCPKMT-201ENST00000395859 THAP6Q8TBB0 222 aa9.57□□□□□ -0.88
VCPKMT-201ENST00000395859 GLYATL2Q8WU03 294 aa9.57□□□□□ -0.88
VCPKMT-201ENST00000395859 CCL28Q9NRJ3 127 aa9.57□□□□□ -0.88
VCPKMT-201ENST00000395859 PKHD1L1Q86WI1 4243 aa9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 A0A0D9SG52 128 aa9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 C5orf51A6NDU8 294 aa9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 DNASE2O00115 360 aaPredicted RBP9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 RGS13O14921 159 aa9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 PGLYRP1O75594 196 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms