RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 VMA21Q3ZAQ7 101 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 NUP35Q8NFH5 326 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 GAGE10A6NGK3 116 aa10.79□□□□□ -0.68
NFKB1-202ENST00000394820 A8MWL6 223 aa10.79□□□□□ -0.68
NFKB1-202ENST00000394820 SPENQ96T58 3664 aaKnown RBP10.79□□□□□ -0.68
NFKB1-202ENST00000394820 IDI2-AS1Q9NZ38 188 aa10.79□□□□□ -0.68
NFKB1-202ENST00000394820 OR2T8A6NH00 312 aa10.79□□□□□ -0.68
NFKB1-202ENST00000394820 IGLC2P0DOY2 106 aa10.79□□□□□ -0.68
NFKB1-202ENST00000394820 IGLC3P0DOY3 106 aa10.79□□□□□ -0.68
NFKB1-202ENST00000394820 IGLL1P15814 213 aa10.79□□□□□ -0.68
NFKB1-202ENST00000394820 PRRX1P54821 245 aa10.79□□□□□ -0.68
NFKB1-202ENST00000394820 AKAP13Q12802 2813 aa10.79□□□□□ -0.68
NFKB1-202ENST00000394820 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.79□□□□□ -0.68
NFKB1-202ENST00000394820 PPIFP30405 207 aaKnown RBP10.79□□□□□ -0.68
NFKB1-202ENST00000394820 RPL11P62913 178 aaKnown RBP10.79□□□□□ -0.68
NFKB1-202ENST00000394820 V9GYV3 84 aa10.79□□□□□ -0.68
NFKB1-202ENST00000394820 TNRC6BQ9UPQ9 1833 aaKnown RBP10.78□□□□□ -0.68
NFKB1-202ENST00000394820 ORM1P02763 201 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 ERVK11-1P61568 191 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 CX3CL1P78423 397 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 DIAPH2-AS1Q14236 149 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 TMEM144Q7Z5S9 345 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 FAM90A1Q86YD7 464 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 C5orf17Q8NAS9 161 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 SLC25A33Q9BSK2 321 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 ONECUT1Q9UBC0 465 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 TEX50A0A1B0GTY4 177 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 CCL25O15444 150 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 APOHP02749 345 aaPredicted RBP10.78□□□□□ -0.68
NFKB1-202ENST00000394820 TXNDC17Q9BRA2 123 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 GNB1LQ9BYB4 327 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 TLN2Q9Y4G6 2542 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 TYMSP04818 313 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 ARF6P62330 175 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 MSMPQ1L6U9 139 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 VWC2Q2TAL6 325 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 C11orf53Q8IXP5 236 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 C18orf32Q8TCD1 76 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 Q8TCH9 128 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 ZNF430Q9H8G1 570 aaPredicted RBP10.78□□□□□ -0.68
NFKB1-202ENST00000394820 INSIG2Q9Y5U4 225 aa10.78□□□□□ -0.68
NFKB1-202ENST00000394820 IZUMO1RA6ND01 250 aa10.77□□□□□ -0.68
NFKB1-202ENST00000394820 FAM181BA6NEQ2 426 aa10.77□□□□□ -0.68
NFKB1-202ENST00000394820 SRRM4A7MD48 611 aaKnown RBP10.77□□□□□ -0.68
NFKB1-202ENST00000394820 PMS2P5A8MQ11 134 aa10.77□□□□□ -0.68
NFKB1-202ENST00000394820 PROP1O75360 226 aa10.77□□□□□ -0.68
NFKB1-202ENST00000394820 SFTPCP11686 197 aa10.77□□□□□ -0.68
NFKB1-202ENST00000394820 GCSHP23434 173 aa10.77□□□□□ -0.68
NFKB1-202ENST00000394820 FCGR2BP31994 310 aaPredicted RBP10.77□□□□□ -0.68
NFKB1-202ENST00000394820 KLF17Q5JT82 389 aaPredicted RBP10.77□□□□□ -0.68
NFKB1-202ENST00000394820 IGFL4Q6B9Z1 124 aa10.77□□□□□ -0.68
NFKB1-202ENST00000394820 TMEM136Q6ZRR5 245 aa10.77□□□□□ -0.68
NFKB1-202ENST00000394820 KLK15Q9H2R5 256 aa10.77□□□□□ -0.68
NFKB1-202ENST00000394820 TRAV9-2A0A087WT02 112 aa10.77□□□□□ -0.69
NFKB1-202ENST00000394820 IGHV3-66A0A0C4DH42 116 aa10.77□□□□□ -0.69
NFKB1-202ENST00000394820 KBTBD11-OT1A0A1B0GTJ5 212 aa10.77□□□□□ -0.69
NFKB1-202ENST00000394820 LRRC10Q5BKY1 277 aa10.77□□□□□ -0.69
NFKB1-202ENST00000394820 COA6Q5JTJ3 125 aaKnown RBP10.77□□□□□ -0.69
NFKB1-202ENST00000394820 RPEQ96AT9 228 aa10.77□□□□□ -0.69
NFKB1-202ENST00000394820 ACACBO00763 2458 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 ASH1LQ9NR48 2969 aaKnown RBP10.76□□□□□ -0.69
NFKB1-202ENST00000394820 NACAE9PAV3 2078 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 TRBV6-6A0A0A6YYG2 114 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 KIR2DS2P43631 304 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 HBBP68871 147 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 PERPQ96FX8 193 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 ADTRPQ96IZ2 230 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 C20orf144Q9BQM9 153 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 FBXL15Q9H469 300 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 THYN1Q9P016 225 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 TP53TG3Q9ULZ0 132 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 A0A1W2PRE2 83 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 H3BUT2 72 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 K7EQM0 130 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 SRSF7Q16629 238 aaKnown RBP eCLIP10.76□□□□□ -0.69
NFKB1-202ENST00000394820 ZNF474Q6S9Z5 364 aaPredicted RBP10.76□□□□□ -0.69
NFKB1-202ENST00000394820 S100A7AQ86SG5 101 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 RASL11BQ9BPW5 248 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 UFC1Q9Y3C8 167 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 KMT2EQ8IZD2 1858 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 KIR2DL5BA0A0G2JN68 375 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 KIR2DL5BA0A0G2JPC4 375 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 DLL1O00548 723 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 IGKV3-15P01624 115 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 KIR2DL5AQ8N109 375 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 ZNF714Q96N38 554 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 GAL3ST2Q9H3Q3 398 aa10.76□□□□□ -0.69
NFKB1-202ENST00000394820 VDAC2P45880 294 aaPredicted RBP10.75□□□□□ -0.69
NFKB1-202ENST00000394820 MBNL2Q5VZF2 373 aaKnown RBP10.75□□□□□ -0.69
NFKB1-202ENST00000394820 OSTCQ9NRP0 149 aa10.75□□□□□ -0.69
NFKB1-202ENST00000394820 IGHG3P01860 377 aa10.75□□□□□ -0.69
NFKB1-202ENST00000394820 RPL27AP46776 148 aaKnown RBP10.75□□□□□ -0.69
NFKB1-202ENST00000394820 YPEL3P61236 119 aaPredicted RBP10.75□□□□□ -0.69
NFKB1-202ENST00000394820 FOXC1Q12948 553 aa10.75□□□□□ -0.69
NFKB1-202ENST00000394820 SPACA3Q8IXA5 215 aa10.75□□□□□ -0.69
NFKB1-202ENST00000394820 TEX45Q8NA69 505 aa10.75□□□□□ -0.69
NFKB1-202ENST00000394820 CHD8Q9HCK8 2581 aa10.75□□□□□ -0.69
NFKB1-202ENST00000394820 M0R3E3 92 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 UPK2O00526 184 aa10.74□□□□□ -0.69
NFKB1-202ENST00000394820 AREGP15514 252 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms