RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 OTORQ9NRC9 128 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 FAM215AQ9Y5M1 114 aa8.09□□□□□ -1.11
UBE2D3-208ENST00000394803 IGLV2-23P01705 113 aa8.09□□□□□ -1.12
UBE2D3-208ENST00000394803 FTH1P19P0C7X4 201 aa8.09□□□□□ -1.12
UBE2D3-208ENST00000394803 ORM2P19652 201 aa8.09□□□□□ -1.12
UBE2D3-208ENST00000394803 RPL27AP46776 148 aaKnown RBP8.09□□□□□ -1.12
UBE2D3-208ENST00000394803 ST6GALNAC6Q969X2 333 aa8.09□□□□□ -1.12
UBE2D3-208ENST00000394803 TMEM14CQ9P0S9 112 aa8.09□□□□□ -1.12
UBE2D3-208ENST00000394803 HSPB8Q9UJY1 196 aa8.09□□□□□ -1.12
UBE2D3-208ENST00000394803 CACNA1HO95180 2353 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 DYSFO75923 2080 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 C2orf70A6NJV1 201 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 C22orf46C9J442 243 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 K7EQM0 130 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 TCRAP04437 139 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 PTTG1IPP53801 180 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 MUC15Q8N387 334 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 STPG4Q8N801 248 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 FAM57AQ8TBR7 257 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 BLNKQ8WV28 456 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 SRSF8Q9BRL6 282 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 KAAG1Q9UBP8 84 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 HIGD1AQ9Y241 93 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 COX11Q9Y6N1 276 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 WDFY3Q8IZQ1 3526 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 KNTC1P50748 2209 aa8.08□□□□□ -1.12
UBE2D3-208ENST00000394803 A0A1W2PPI3 338 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 C19orf71A6NCJ1 209 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 TMEM178BH3BS89 294 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 SLC25A17O43808 307 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 LEPROTL1O95214 131 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 MOSP00540 346 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 CCL3L1P16619 93 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 TFPI2P48307 235 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 CCL8P80075 99 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 LEMD1Q68G75 181 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 Q6AWC8 147 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 EBLN2Q6P2I7 272 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 PET117Q6UWS5 81 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 Q6ZS92 163 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 MAP1LC3CQ9BXW4 147 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 Q9H3A6 140 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 PRR14LQ5THK1 2151 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 OR4C46A6NHA9 309 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 CGB1A6NKQ9 187 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 C16orf97H3BN30 126 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 HAX1O00165 279 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 TCF21O43680 179 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 GP9P14770 177 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 GNG5P63218 68 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 SSBP2P81877 361 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 UBE2V1Q13404 147 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 GDF5OSQ5U4N7 250 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 PMCHL2Q9BQD1 86 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 MS4A6AQ9H2W1 248 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 NGBQ9NPG2 151 aa8.07□□□□□ -1.12
UBE2D3-208ENST00000394803 DMXL1Q9Y485 3027 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 IGLC7A0M8Q6 106 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 NPIPB6E9PJ23 425 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 SYS1-DBNDD2H3BUS1 97 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 COL8A1P27658 744 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 RIGQ13278 110 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 C12orf54Q6X4T0 127 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 RNF5Q99942 180 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 SSBP4Q9BWG4 385 aaPredicted RBP8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 ZNRD1Q9P1U0 126 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 CFAP54Q96N23 3096 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 LOC102724200A0A096LPH7 203 aaPredicted RBP8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 ENSAO43768 121 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 IGLL1P15814 213 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 HINT1P49773 126 aaPredicted RBP8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 FAM27E3Q08E93 113 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 TMEM155Q4W5P6 130 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 Q86TA4 180 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 ATOH7Q8N100 152 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 LYPD1Q8N2G4 141 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 TMEM133Q9H2Q1 129 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 GSX1Q9H4S2 264 aaPredicted RBP8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 RPH3ALQ9UNE2 315 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 ZNF835Q9Y2P0 537 aa8.06□□□□□ -1.12
UBE2D3-208ENST00000394803 E7EUB6 86 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 HLA-DRB1P01911 266 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 GPR6P46095 362 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 RPS20P60866 119 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 SRSF6Q13247 344 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 ADIPOQQ15848 244 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 C10orf55Q5SWW7 151 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 LCN12Q6JVE5 192 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 SLC25A34Q6PIV7 304 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 TCF24Q7RTU0 167 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 PRSS33Q8NF86 280 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 SCNM1Q9BWG6 230 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 F11RQ9Y624 299 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 MUC6Q6W4X9 2439 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 IGHV1-24A0A0C4DH33 117 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 NDUFB8O95169 186 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 IGHV1-8P0DP01 117 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 WT1P19544 449 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 FOXA3P55318 350 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms