RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 FBLIM1Q8WUP2 373 aa6.21□□□□□ -1.42
SYNE2-205ENST00000394768 DAZ1Q9NQZ3 744 aaKnown RBP6.21□□□□□ -1.42
SYNE2-205ENST00000394768 EPDR1Q9UM22 224 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 SHANK1Q9Y566 2161 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 LCTP09848 1927 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 PLXND1Q9Y4D7 1925 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 H3BTX0 84 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 SPATA31B1PQ5VZV4 182 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 UBE2WQ96B02 151 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 PTPRFP10586 1907 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 LTBRP36941 435 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 PSPNO60542 156 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 NMBP08949 121 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 CGB3P0DN86 165 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 CD160O95971 181 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 GAGE2BQ13066 116 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 EML6Q6ZMW3 1958 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 MPTX1A8MV57 137 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 C1QL1O75973 258 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 CGB7P0DN87 165 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 ZNF138P52744 262 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 ZNF497Q6ZNH5 498 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 KLHL30-AS1Q8NEE0 82 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 MBNL3Q9NUK0 354 aaKnown RBP6.2□□□□□ -1.42
SYNE2-205ENST00000394768 IGKV1-8A0A0C4DH67 115 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 SIGLEC5O15389 551 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 IGLV3-19P01714 112 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 PDE6HQ13956 83 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 TGIF1Q15583 401 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 FAM216BQ8N7L0 139 aa6.2□□□□□ -1.42
SYNE2-205ENST00000394768 C22orf46C9J442 243 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 TSKUQ8WUA8 353 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 TMEM52Q8NDY8 209 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 RFNGQ9Y644 331 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 SPACA3Q8IXA5 215 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.19□□□□□ -1.42
SYNE2-205ENST00000394768 MUC21Q5SSG8 566 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 PPP1R3EQ9H7J1 279 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 PLA2G10O15496 165 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 MLNRO43193 412 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 IGHV1-2P23083 117 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 MORN2Q502X0 79 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 MRPL14Q6P1L8 145 aaKnown RBP6.19□□□□□ -1.42
SYNE2-205ENST00000394768 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 ADAMTSL1Q8N6G6 1762 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 CTAG1AP78358 180 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 C3orf36Q3SXR2 165 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 CD200R1LQ6Q8B3 271 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 THAP8Q8NA92 274 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 ST6GALNAC3Q8NDV1 305 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 LY6G5BQ8NDX9 201 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 CDKN1AP38936 164 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 PLPPR1Q8TBJ4 325 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 A0A0G2JK05 382 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 TRGV9Q99603 122 aa6.19□□□□□ -1.42
SYNE2-205ENST00000394768 H3BQ85 93 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 PSG8Q9UQ74 426 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 GATA2P23769 480 aaPredicted RBP6.18□□□□□ -1.42
SYNE2-205ENST00000394768 TRBV25-1A0A075B6N4 114 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 TRBV6-7A0A0A0MS04 114 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 SCO2A0A1W2PP80 73 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 CRLF1O75462 422 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 DAD1P61803 113 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 PSG7Q13046 419 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 RBM38Q9H0Z9 239 aaKnown RBP6.18□□□□□ -1.42
SYNE2-205ENST00000394768 SBF2Q86WG5 1849 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 CXCL2P19875 107 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 C8orf82Q6P1X6 216 aaPredicted RBP6.18□□□□□ -1.42
SYNE2-205ENST00000394768 IFI27L1Q96BM0 104 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 ZNF479Q96JC4 524 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 TIMM21Q9BVV7 248 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 J3QLI3 93 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 IGHV3-48P01763 117 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 CCL1P22362 96 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 VMO1Q7Z5L0 202 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 BRWD3Q6RI45 1802 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 SRRM4A7MD48 611 aaKnown RBP6.18□□□□□ -1.42
SYNE2-205ENST00000394768 IGHV2-26A0A0B4J1V2 119 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 ZIC3O60481 467 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 IGFBP6P24592 240 aaPredicted RBP6.18□□□□□ -1.42
SYNE2-205ENST00000394768 FBLN5Q9UBX5 448 aa6.18□□□□□ -1.42
SYNE2-205ENST00000394768 SUPT4H1P63272 117 aaKnown RBP6.18□□□□□ -1.42
SYNE2-205ENST00000394768 TNRC6AQ8NDV7 1962 aaKnown RBP6.17□□□□□ -1.42
SYNE2-205ENST00000394768 SMIM10L1P0DMW3 83 aa6.17□□□□□ -1.42
SYNE2-205ENST00000394768 LHX2P50458 406 aa6.17□□□□□ -1.42
SYNE2-205ENST00000394768 SMIM10Q96HG1 83 aa6.17□□□□□ -1.42
SYNE2-205ENST00000394768 IMMP1LQ96LU5 166 aa6.17□□□□□ -1.42
SYNE2-205ENST00000394768 UBL5Q9BZL1 73 aa6.17□□□□□ -1.42
SYNE2-205ENST00000394768 PTPRDP23468 1912 aa6.17□□□□□ -1.42
SYNE2-205ENST00000394768 SOCS3O14543 225 aa6.17□□□□□ -1.42
SYNE2-205ENST00000394768 TRPT1Q86TN4 253 aaKnown RBP6.17□□□□□ -1.42
SYNE2-205ENST00000394768 IGFBP3P17936 291 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-205ENST00000394768 MGAMO43451 1857 aa6.17□□□□□ -1.42
SYNE2-205ENST00000394768 MMP23AO75900 390 aa6.17□□□□□ -1.42
SYNE2-205ENST00000394768 SSBP2P81877 361 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-205ENST00000394768 DSCR8Q96T75 97 aa6.17□□□□□ -1.42
SYNE2-205ENST00000394768 TNS1Q9HBL0 1735 aaKnown RBP6.17□□□□□ -1.42
SYNE2-205ENST00000394768 SAMD5Q5TGI4 173 aa6.17□□□□□ -1.42
SYNE2-205ENST00000394768 PRIMA1Q86XR5 153 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms