RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 Q8N976 141 aa10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 GNB1LQ9BYB4 327 aa10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 AKAP6Q13023 2319 aa10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 LINC00322Q6ZN03 302 aaPredicted RBP10.79□□□□□ -0.68
GTF2F1-201ENST00000394456 BEND2Q8NDZ0 799 aa10.79□□□□□ -0.68
GTF2F1-201ENST00000394456 WASHC3Q9Y3C0 194 aa10.79□□□□□ -0.68
GTF2F1-201ENST00000394456 TBL2Q9Y4P3 447 aaKnown RBP10.79□□□□□ -0.68
GTF2F1-201ENST00000394456 A0A1W2PS18 150 aa10.79□□□□□ -0.68
GTF2F1-201ENST00000394456 TCRBV4S1A1TA0A5B7 111 aa10.79□□□□□ -0.68
GTF2F1-201ENST00000394456 IGLC7A0M8Q6 106 aa10.79□□□□□ -0.68
GTF2F1-201ENST00000394456 A6NNC1 897 aa10.79□□□□□ -0.68
GTF2F1-201ENST00000394456 LY6HO94772 140 aa10.79□□□□□ -0.68
GTF2F1-201ENST00000394456 IGHV1-8P0DP01 117 aa10.79□□□□□ -0.68
GTF2F1-201ENST00000394456 G0S2P27469 103 aa10.79□□□□□ -0.68
GTF2F1-201ENST00000394456 CHODLQ9H9P2 273 aa10.79□□□□□ -0.68
GTF2F1-201ENST00000394456 SMIM27A0A1W2PRY6 76 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 PEX7O00628 323 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 TNXAQ16473 311 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 FBXL19-AS1Q494R0 122 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 NUDT10Q8NFP7 164 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 CACNG8Q8WXS5 425 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 NUDT11Q96G61 164 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 MED13LQ71F56 2210 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 ZNF253O75346 499 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 GPX1P07203 203 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 COX7A1P24310 79 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 Q0VG73 95 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 TMEM155Q4W5P6 130 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 PDPNQ86YL7 162 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 ATOH7Q8N100 152 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 RALYQ9UKM9 306 aaKnown RBP10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 ESDP10768 282 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 AMTP48728 403 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 PNKDQ8N490 385 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 KIR3DL3Q8N743 410 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 TNFRSF19Q9NS68 423 aa10.78□□□□□ -0.68
GTF2F1-201ENST00000394456 TRAV9-1A0A075B6T8 112 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 AMY1AP04745 511 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 NTF3P20783 257 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 CAMPP49913 170 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 MAJINQ3KP22 176 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 TEX43Q6ZNM6 134 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 MRPL32Q9BYC8 188 aaKnown RBP10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 NRN1Q9NPD7 142 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 SPTAN1Q13813 2472 aaKnown RBP10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 NUTF2P61970 127 aaKnown RBP10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 TMEM30BQ3MIR4 351 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 FBLN7Q53RD9 439 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 LCN12Q6JVE5 192 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 TCF24Q7RTU0 167 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 SIGLECL1Q8N7X8 197 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 NUP35Q8NFH5 326 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 ARL2-SNX15V9GYD0 113 aa10.77□□□□□ -0.69
GTF2F1-201ENST00000394456 PGPA6NDG6 321 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 TCAPO15273 167 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 PAFAH1B2P68402 229 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 ZNF672Q499Z4 452 aaPredicted RBP10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 LDLRAD2Q5SZI1 272 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 TMEM186Q96B77 213 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 S4R3C0 116 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 TRAV8-1A0A0A6YYK1 113 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 M0QZ24 198 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 SLC25A5P05141 298 aaKnown RBP10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 BATFQ16520 125 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 NIT1Q86X76 327 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 THAP8Q8NA92 274 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 MBD6Q96DN6 1003 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 TMEM68Q96MH6 324 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 WNT10AQ9GZT5 417 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 FBXL15Q9H469 300 aa10.76□□□□□ -0.69
GTF2F1-201ENST00000394456 CACNA1AO00555 2505 aa10.75□□□□□ -0.69
GTF2F1-201ENST00000394456 APCSP02743 223 aa10.75□□□□□ -0.69
GTF2F1-201ENST00000394456 C19orf24Q9BVV8 132 aa10.75□□□□□ -0.69
GTF2F1-201ENST00000394456 TMEM133Q9H2Q1 129 aa10.75□□□□□ -0.69
GTF2F1-201ENST00000394456 C7orf69Q9H7B7 122 aa10.75□□□□□ -0.69
GTF2F1-201ENST00000394456 KAAG1Q9UBP8 84 aa10.75□□□□□ -0.69
GTF2F1-201ENST00000394456 IZUMO1RA6ND01 250 aa10.75□□□□□ -0.69
GTF2F1-201ENST00000394456 RAB4AP20338 218 aa10.75□□□□□ -0.69
GTF2F1-201ENST00000394456 BRS3P32247 399 aa10.75□□□□□ -0.69
GTF2F1-201ENST00000394456 MYCNOSP40205 109 aa10.75□□□□□ -0.69
GTF2F1-201ENST00000394456 VMA21Q3ZAQ7 101 aa10.75□□□□□ -0.69
GTF2F1-201ENST00000394456 TSKUQ8WUA8 353 aa10.75□□□□□ -0.69
GTF2F1-201ENST00000394456 NEU1Q99519 415 aa10.75□□□□□ -0.69
GTF2F1-201ENST00000394456 IGHV2-26A0A0B4J1V2 119 aa10.74□□□□□ -0.69
GTF2F1-201ENST00000394456 SH2D7A6NKC9 451 aaPredicted RBP10.74□□□□□ -0.69
GTF2F1-201ENST00000394456 DIRC3C9JPN6 131 aa10.74□□□□□ -0.69
GTF2F1-201ENST00000394456 VSTM2AQ8TAG5 236 aa10.74□□□□□ -0.69
GTF2F1-201ENST00000394456 ZNF596Q8TC21 504 aa10.74□□□□□ -0.69
GTF2F1-201ENST00000394456 WNK2Q9Y3S1 2297 aa10.74□□□□□ -0.69
GTF2F1-201ENST00000394456 HIGD1CA8MV81 97 aa10.74□□□□□ -0.69
GTF2F1-201ENST00000394456 LINC00311Q8N616 119 aa10.74□□□□□ -0.69
GTF2F1-201ENST00000394456 C18orf32Q8TCD1 76 aa10.74□□□□□ -0.69
GTF2F1-201ENST00000394456 KCNS1Q96KK3 526 aa10.74□□□□□ -0.69
GTF2F1-201ENST00000394456 VAMP8Q9BV40 100 aa10.74□□□□□ -0.69
GTF2F1-201ENST00000394456 EPDR1Q9UM22 224 aa10.74□□□□□ -0.69
GTF2F1-201ENST00000394456 A0A1W2PRD5 423 aa10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 A0A1W2PRF3 423 aa10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 A0A1W2PRM7 423 aa10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 M0R143 59 aa10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 C3orf79P0CE67 100 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms