RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 MZT1Q08AG7 82 aa15.26■□□□□ 0.03
HOXC6-202ENST00000394331 C9orf106Q8NAJ2 232 aa15.26■□□□□ 0.03
HOXC6-202ENST00000394331 PRR33A8MZF0 331 aa15.26■□□□□ 0.03
HOXC6-202ENST00000394331 FCGR3BO75015 233 aa15.26■□□□□ 0.03
HOXC6-202ENST00000394331 FAM167A-AS1Q96KT0 104 aa15.26■□□□□ 0.03
HOXC6-202ENST00000394331 VGLL1Q99990 258 aa15.26■□□□□ 0.03
HOXC6-202ENST00000394331 SPANXB1Q9NS25 103 aaPredicted RBP15.26■□□□□ 0.03
HOXC6-202ENST00000394331 FOXA2Q9Y261 457 aaPredicted RBP15.26■□□□□ 0.03
HOXC6-202ENST00000394331 HILPDAQ9Y5L2 63 aa15.26■□□□□ 0.03
HOXC6-202ENST00000394331 SNAI2O43623 268 aa15.25■□□□□ 0.03
HOXC6-202ENST00000394331 CECR9P0C854 216 aa15.25■□□□□ 0.03
HOXC6-202ENST00000394331 KIR2DS2P43631 304 aa15.25■□□□□ 0.03
HOXC6-202ENST00000394331 C5orf64Q2M2E5 130 aa15.25■□□□□ 0.03
HOXC6-202ENST00000394331 IGFL2Q6UWQ7 119 aa15.25■□□□□ 0.03
HOXC6-202ENST00000394331 ZNF329Q86UD4 541 aa15.25■□□□□ 0.03
HOXC6-202ENST00000394331 NAA38Q9BRA0 125 aaKnown RBP15.25■□□□□ 0.03
HOXC6-202ENST00000394331 ZNF492Q9P255 531 aa15.25■□□□□ 0.03
HOXC6-202ENST00000394331 TET2Q6N021 2002 aaPredicted RBP15.25■□□□□ 0.03
HOXC6-202ENST00000394331 IGHV3-7P01780 117 aa15.25■□□□□ 0.03
HOXC6-202ENST00000394331 CSN1S1P47710 185 aa15.25■□□□□ 0.03
HOXC6-202ENST00000394331 FAM53AQ6NSI3 398 aaPredicted RBP15.25■□□□□ 0.03
HOXC6-202ENST00000394331 PLPPR2Q96GM1 343 aa15.25■□□□□ 0.03
HOXC6-202ENST00000394331 LINC00479Q96M42 142 aa15.25■□□□□ 0.03
HOXC6-202ENST00000394331 TMEM140Q9NV12 185 aa15.25■□□□□ 0.03
HOXC6-202ENST00000394331 SMIM13P0DJ93 91 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 ATP5IP56385 69 aaPredicted RBP15.24■□□□□ 0.03
HOXC6-202ENST00000394331 LINC00205P59089 165 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 UBE2L3P68036 154 aaKnown RBP15.24■□□□□ 0.03
HOXC6-202ENST00000394331 LGALS9BQ3B8N2 356 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 LGALS9CQ6DKI2 356 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 GCSAMQ8N6F7 178 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 MCRIP2Q9BUT9 160 aaKnown RBP15.24■□□□□ 0.03
HOXC6-202ENST00000394331 TMUB1Q9BVT8 246 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 TEX50A0A1B0GTY4 177 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 MGST3O14880 152 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 SPINT2O43291 252 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 CT45A6P0DMU7 189 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 CT45A5P0DMU8 189 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 CT45A7P0DMV0 189 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 CT45A1Q5HYN5 189 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 MBNL2Q5VZF2 373 aaKnown RBP15.24■□□□□ 0.03
HOXC6-202ENST00000394331 ZNF788Q6ZQV5 615 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 CT45A3Q8NHU0 189 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 BLNKQ8WV28 456 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 SLC25A2Q9BXI2 301 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 HCFC1P51610 2035 aa15.24■□□□□ 0.03
HOXC6-202ENST00000394331 IGLV1-44P01699 117 aa15.23■□□□□ 0.03
HOXC6-202ENST00000394331 RBPMS2Q6ZRY4 209 aaKnown RBP15.23■□□□□ 0.03
HOXC6-202ENST00000394331 STXBP6Q8NFX7 210 aa15.23■□□□□ 0.03
HOXC6-202ENST00000394331 COL6A3P12111 3177 aa15.23■□□□□ 0.03
HOXC6-202ENST00000394331 OR13A1Q8NGR1 328 aa15.23■□□□□ 0.03
HOXC6-202ENST00000394331 RAB37Q96AX2 223 aa15.23■□□□□ 0.03
HOXC6-202ENST00000394331 ENY2Q9NPA8 101 aa15.23■□□□□ 0.03
HOXC6-202ENST00000394331 TMEM14BQ9NUH8 114 aa15.23■□□□□ 0.03
HOXC6-202ENST00000394331 SRRM4A7MD48 611 aaKnown RBP15.23■□□□□ 0.03
HOXC6-202ENST00000394331 HSPE1P61604 102 aaKnown RBP15.23■□□□□ 0.03
HOXC6-202ENST00000394331 AP5S1Q9NUS5 200 aa15.23■□□□□ 0.03
HOXC6-202ENST00000394331 KLF12Q9Y4X4 402 aa15.23■□□□□ 0.03
HOXC6-202ENST00000394331 H0Y8G0 127 aa15.22■□□□□ 0.03
HOXC6-202ENST00000394331 FZR1Q9UM11 496 aa15.22■□□□□ 0.03
HOXC6-202ENST00000394331 TRAV3A0A0B4J244 114 aa15.22■□□□□ 0.03
HOXC6-202ENST00000394331 PSMG4Q5JS54 123 aa15.22■□□□□ 0.03
HOXC6-202ENST00000394331 ZADH2Q8N4Q0 377 aa15.22■□□□□ 0.03
HOXC6-202ENST00000394331 GTSF1Q8WW33 167 aa15.22■□□□□ 0.03
HOXC6-202ENST00000394331 MLST8Q9BVC4 326 aa15.22■□□□□ 0.03
HOXC6-202ENST00000394331 METRNQ9UJH8 293 aa15.22■□□□□ 0.03
HOXC6-202ENST00000394331 PCNX2A6NKB5 2137 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 K7EQM0 130 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 HAX1O00165 279 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 PROP1O75360 226 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 INSIG2Q9Y5U4 225 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 SELENOKQ9Y6D0 94 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 C19orf71A6NCJ1 209 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 CHEK1O14757 476 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 TFF1P04155 84 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 PRDX2P32119 198 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 HOXA4Q00056 320 aaPredicted RBP15.21■□□□□ 0.03
HOXC6-202ENST00000394331 TMEM95Q3KNT9 176 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 ASPHD1Q5U4P2 390 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 GATD1Q8NB37 220 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 RFESDQ8TAC1 157 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 PROCRQ9UNN8 238 aa15.21■□□□□ 0.03
HOXC6-202ENST00000394331 IGKV1OR2-108A0A075B7D4 117 aa15.2■□□□□ 0.02
HOXC6-202ENST00000394331 NCR2O95944 276 aa15.2■□□□□ 0.02
HOXC6-202ENST00000394331 MYCNOSP40205 109 aa15.2■□□□□ 0.02
HOXC6-202ENST00000394331 PIP4P1Q86T03 277 aa15.2■□□□□ 0.02
HOXC6-202ENST00000394331 FAM169BQ8N8A8 192 aa15.2■□□□□ 0.02
HOXC6-202ENST00000394331 ZNF714Q96N38 554 aa15.2■□□□□ 0.02
HOXC6-202ENST00000394331 GEMIN7Q9H840 131 aaKnown RBP15.2■□□□□ 0.02
HOXC6-202ENST00000394331 MRPL16Q9NX20 251 aaKnown RBP15.2■□□□□ 0.02
HOXC6-202ENST00000394331 URB1O60287 2271 aaKnown RBP15.2■□□□□ 0.02
HOXC6-202ENST00000394331 IGHV3-43A0A0B4J1X8 118 aa15.2■□□□□ 0.02
HOXC6-202ENST00000394331 IGHV1-18A0A0C4DH31 117 aa15.2■□□□□ 0.02
HOXC6-202ENST00000394331 TSPAN13O95857 204 aa15.2■□□□□ 0.02
HOXC6-202ENST00000394331 IGHV3-43DP0DP04 118 aa15.2■□□□□ 0.02
HOXC6-202ENST00000394331 PIFOQ8TCI5 191 aa15.2■□□□□ 0.02
HOXC6-202ENST00000394331 ZNF71Q9NQZ8 489 aaPredicted RBP15.2■□□□□ 0.02
HOXC6-202ENST00000394331 HIGD1BQ9P298 99 aa15.2■□□□□ 0.02
HOXC6-202ENST00000394331 C15orf65H3BRN8 121 aa15.2■□□□□ 0.02
HOXC6-202ENST00000394331 CT45A10P0DMU9 189 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms