RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 TOMM40O96008 361 aa18.72■□□□□ 0.59
LRFN4-202ENST00000393952 RAB2AP61019 212 aa18.72■□□□□ 0.59
LRFN4-202ENST00000393952 ZNF767PQ75MW2 155 aa18.72■□□□□ 0.59
LRFN4-202ENST00000393952 PEF1Q9UBV8 284 aaKnown RBP18.72■□□□□ 0.59
LRFN4-202ENST00000393952 A0A1B0GUS0 222 aa18.72■□□□□ 0.59
LRFN4-202ENST00000393952 CDX1P47902 265 aaPredicted RBP18.72■□□□□ 0.59
LRFN4-202ENST00000393952 SULT1A2P50226 295 aa18.72■□□□□ 0.59
LRFN4-202ENST00000393952 RPRMQ9NS64 109 aa18.72■□□□□ 0.59
LRFN4-202ENST00000393952 BMPR1BO00238 502 aa18.71■□□□□ 0.59
LRFN4-202ENST00000393952 DOK5Q9P104 306 aa18.71■□□□□ 0.59
LRFN4-202ENST00000393952 UMAD1C9J7I0 102 aa18.7■□□□□ 0.58
LRFN4-202ENST00000393952 RGS13O14921 159 aa18.7■□□□□ 0.58
LRFN4-202ENST00000393952 FHITP49789 147 aa18.7■□□□□ 0.58
LRFN4-202ENST00000393952 ACOT6Q3I5F7 207 aaPredicted RBP18.7■□□□□ 0.58
LRFN4-202ENST00000393952 TMEM41BQ5BJD5 291 aa18.7■□□□□ 0.58
LRFN4-202ENST00000393952 FAM209BQ5JX69 171 aa18.7■□□□□ 0.58
LRFN4-202ENST00000393952 ZNF600Q6ZNG1 722 aa18.7■□□□□ 0.58
LRFN4-202ENST00000393952 Q6ZRG5 221 aa18.7■□□□□ 0.58
LRFN4-202ENST00000393952 Q8WTZ3 238 aa18.7■□□□□ 0.58
LRFN4-202ENST00000393952 CITED2Q99967 270 aaPredicted RBP18.7■□□□□ 0.58
LRFN4-202ENST00000393952 PUS1Q9Y606 427 aaKnown RBP eCLIP18.7■□□□□ 0.58
LRFN4-202ENST00000393952 M6PRP20645 277 aa18.69■□□□□ 0.58
LRFN4-202ENST00000393952 KRTAP10-3P60369 221 aa18.69■□□□□ 0.58
LRFN4-202ENST00000393952 LYZP61626 148 aa18.69■□□□□ 0.58
LRFN4-202ENST00000393952 FOXL1Q12952 345 aa18.69■□□□□ 0.58
LRFN4-202ENST00000393952 OR51G1Q8NGK1 321 aa18.69■□□□□ 0.58
LRFN4-202ENST00000393952 PCNPQ8WW12 178 aaKnown RBP18.69■□□□□ 0.58
LRFN4-202ENST00000393952 I3L521 148 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 OR2C1O95371 312 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 MBP02144 154 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 KRTAP24-1Q3LI83 254 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 OR10G4Q8NGN3 311 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 OR10G9Q8NGN4 311 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 OR10G7Q8NGN6 311 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 RNF141Q8WVD5 230 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 ATRQ13535 2644 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 WI2-2373I1.2A0A1W2PRP0 233 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 IL4P05112 153 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 ORM2P19652 201 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 RAB5CP51148 216 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 RELQ04864 619 aaPredicted RBP18.68■□□□□ 0.58
LRFN4-202ENST00000393952 KLHL30-AS1Q8NEE0 82 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 OR1B1Q8NGR6 318 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 FAM213BQ8TBF2 198 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 C4orf3Q8WVX3 66 aa18.68■□□□□ 0.58
LRFN4-202ENST00000393952 GGCTO75223 188 aaKnown RBP18.67■□□□□ 0.58
LRFN4-202ENST00000393952 PLP1P60201 277 aa18.67■□□□□ 0.58
LRFN4-202ENST00000393952 FAM122CQ6P4D5 195 aa18.67■□□□□ 0.58
LRFN4-202ENST00000393952 TOMM20LQ6UXN7 152 aa18.67■□□□□ 0.58
LRFN4-202ENST00000393952 PATE2Q6UY27 113 aa18.67■□□□□ 0.58
LRFN4-202ENST00000393952 RPP25LQ8N5L8 163 aaKnown RBP18.67■□□□□ 0.58
LRFN4-202ENST00000393952 TMEM37Q8WXS4 190 aa18.67■□□□□ 0.58
LRFN4-202ENST00000393952 RNF125Q96EQ8 232 aa18.67■□□□□ 0.58
LRFN4-202ENST00000393952 PBDC1Q9BVG4 233 aa18.67■□□□□ 0.58
LRFN4-202ENST00000393952 IGHV4OR15-8A0A075B7B6 117 aa18.66■□□□□ 0.58
LRFN4-202ENST00000393952 IGHV3OR16-8A0A075B7F1 116 aa18.66■□□□□ 0.58
LRFN4-202ENST00000393952 A0A087WW49 117 aa18.66■□□□□ 0.58
LRFN4-202ENST00000393952 A0A1W2PRX2 142 aa18.66■□□□□ 0.58
LRFN4-202ENST00000393952 ZNF705EA8MWA4 302 aaPredicted RBP18.66■□□□□ 0.58
LRFN4-202ENST00000393952 NUDT19A8MXV4 375 aa18.66■□□□□ 0.58
LRFN4-202ENST00000393952 COX7A2P2O60397 106 aa18.66■□□□□ 0.58
LRFN4-202ENST00000393952 DEFB136Q30KP8 78 aa18.66■□□□□ 0.58
LRFN4-202ENST00000393952 WFDC12Q8WWY7 111 aa18.66■□□□□ 0.58
LRFN4-202ENST00000393952 RCC1LQ96I51 464 aaKnown RBP18.66■□□□□ 0.58
LRFN4-202ENST00000393952 TSSC4Q9Y5U2 329 aaPredicted RBP18.66■□□□□ 0.58
LRFN4-202ENST00000393952 HYPMO75409 117 aa18.65■□□□□ 0.58
LRFN4-202ENST00000393952 EIF3GO75821 320 aaKnown RBP eCLIP18.65■□□□□ 0.58
LRFN4-202ENST00000393952 OR5G3P0C626 314 aa18.65■□□□□ 0.58
LRFN4-202ENST00000393952 USF2Q15853 346 aaPredicted RBP18.65■□□□□ 0.58
LRFN4-202ENST00000393952 ZNF726P1Q15940 193 aa18.65■□□□□ 0.58
LRFN4-202ENST00000393952 OR1L4Q8NGR5 311 aa18.65■□□□□ 0.58
LRFN4-202ENST00000393952 ZFAND3Q9H8U3 227 aa18.65■□□□□ 0.58
LRFN4-202ENST00000393952 DNAJC4Q9NNZ3 241 aa18.65■□□□□ 0.58
LRFN4-202ENST00000393952 HSPB1P04792 205 aaKnown RBP18.64■□□□□ 0.58
LRFN4-202ENST00000393952 AWAT1Q58HT5 328 aa18.64■□□□□ 0.58
LRFN4-202ENST00000393952 PXDC1Q5TGL8 231 aa18.64■□□□□ 0.58
LRFN4-202ENST00000393952 C10orf113Q5VZT2 155 aa18.64■□□□□ 0.58
LRFN4-202ENST00000393952 DPPA3Q6W0C5 159 aa18.64■□□□□ 0.58
LRFN4-202ENST00000393952 SSX7Q7RTT5 188 aa18.64■□□□□ 0.58
LRFN4-202ENST00000393952 SLC25A22Q9H936 323 aa18.64■□□□□ 0.58
LRFN4-202ENST00000393952 SPATA31B1PQ5VZV4 182 aa18.64■□□□□ 0.57
LRFN4-202ENST00000393952 C8orf86Q6ZUL3 223 aa18.64■□□□□ 0.57
LRFN4-202ENST00000393952 GATAD1Q8WUU5 269 aa18.64■□□□□ 0.57
LRFN4-202ENST00000393952 UHRF2Q96PU4 802 aa18.64■□□□□ 0.57
LRFN4-202ENST00000393952 PFDN5Q99471 154 aa18.64■□□□□ 0.57
LRFN4-202ENST00000393952 SEPSECSQ9HD40 501 aaKnown RBP18.64■□□□□ 0.57
LRFN4-202ENST00000393952 NDUFA4O00483 81 aa18.63■□□□□ 0.57
LRFN4-202ENST00000393952 RPEL1Q2QD12 228 aa18.63■□□□□ 0.57
LRFN4-202ENST00000393952 FAM78BQ5VT40 261 aa18.63■□□□□ 0.57
LRFN4-202ENST00000393952 ACTR3CQ9C0K3 210 aaPredicted RBP18.63■□□□□ 0.57
LRFN4-202ENST00000393952 HIGD1AQ9Y241 93 aa18.63■□□□□ 0.57
LRFN4-202ENST00000393952 ELOA3CA0A087WX78 387 aaPredicted RBP18.62■□□□□ 0.57
LRFN4-202ENST00000393952 SEC14L6B5MCN3 397 aa18.62■□□□□ 0.57
LRFN4-202ENST00000393952 NMBP08949 121 aa18.62■□□□□ 0.57
LRFN4-202ENST00000393952 CDC34P49427 236 aaPredicted RBP18.62■□□□□ 0.57
LRFN4-202ENST00000393952 RHOBP62745 196 aa18.62■□□□□ 0.57
LRFN4-202ENST00000393952 UNQ9165/PRO28630Q6UXU0 137 aa18.62■□□□□ 0.57
LRFN4-202ENST00000393952 DUX3Q96PT4 197 aa18.62■□□□□ 0.57
LRFN4-202ENST00000393952 C19orf24Q9BVV8 132 aa18.62■□□□□ 0.57
LRFN4-202ENST00000393952 MRPL27Q9P0M9 148 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms