RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 OR1N2Q8NGR9 330 aa9.05□□□□□ -0.96
CUX1-204ENST00000393824 URB1-AS1Q96HZ7 61 aa9.05□□□□□ -0.96
CUX1-204ENST00000393824 OR2V2Q96R30 315 aa9.05□□□□□ -0.96
CUX1-204ENST00000393824 SCRT2Q9NQ03 307 aa9.05□□□□□ -0.96
CUX1-204ENST00000393824 SERTAD4Q9NUC0 356 aa9.05□□□□□ -0.96
CUX1-204ENST00000393824 UFSP1Q6NVU6 142 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 MIR17HGQ75NE6 70 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 OR2T6Q8NHC8 308 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 ITLN2Q8WWU7 325 aaPredicted RBP9.04□□□□□ -0.96
CUX1-204ENST00000393824 MS4A6AQ9H2W1 248 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 MAP1AP78559 2803 aaPredicted RBP9.04□□□□□ -0.96
CUX1-204ENST00000393824 PPIAL4EA0A075B759 164 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 PPIAL4CA0A0B4J2A2 164 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 IGHV3-64DA0A0J9YX35 117 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 IQCF6A8MYZ5 107 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 PPIAL4DF5H284 164 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 ADH4P08319 380 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 PPIAL4FP0DN26 164 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 MFAP2P55001 183 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 FAM53AQ6NSI3 398 aaPredicted RBP9.04□□□□□ -0.96
CUX1-204ENST00000393824 ABHD12Q8N2K0 398 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 FAM168AQ92567 244 aa9.04□□□□□ -0.96
CUX1-204ENST00000393824 USP9YO00507 2555 aaPredicted RBP9.04□□□□□ -0.96
CUX1-204ENST00000393824 FBN2P35556 2912 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 A0A1W2PRE2 83 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 hDV102S1A0JD36 115 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 GGTLC3B5MD39 225 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 C19orf84I3L1E1 186 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 PSPNO60542 156 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 CA1P00915 261 aaPredicted RBP9.03□□□□□ -0.96
CUX1-204ENST00000393824 MGST1P10620 155 aaKnown RBP9.03□□□□□ -0.96
CUX1-204ENST00000393824 DUTP33316 252 aaKnown RBP9.03□□□□□ -0.96
CUX1-204ENST00000393824 LINC00205P59089 165 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 HOXA4Q00056 320 aaPredicted RBP9.03□□□□□ -0.96
CUX1-204ENST00000393824 RTL8BQ17RB0 113 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 NUP35Q8NFH5 326 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 OR4A16Q8NH70 328 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 ZNF503Q96F45 646 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 TMEM191AQ9H0A3 160 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 OBP2BQ9NPH6 170 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 GAGE10A6NGK3 116 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 FNDC10F2Z333 226 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 COL8A2P25067 703 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 CD40P25942 277 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 FABP6P51161 128 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 CRYBA4P53673 196 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 BSPH1Q075Z2 132 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 KLF14Q8TD94 323 aaPredicted RBP9.03□□□□□ -0.96
CUX1-204ENST00000393824 FAM222BQ8WU58 562 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 CHCHD1Q96BP2 118 aaKnown RBP9.03□□□□□ -0.96
CUX1-204ENST00000393824 GRAMD2BQ96HH9 432 aa9.03□□□□□ -0.96
CUX1-204ENST00000393824 SRSF1Q07955 248 aaKnown RBP eCLIP9.02□□□□□ -0.97
CUX1-204ENST00000393824 FBXL19-AS1Q494R0 122 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 PRAMEF5Q5TYX0 476 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 PRAMEF6Q5VXH4 476 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 GTF2H5Q6ZYL4 71 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 ATP5L2Q7Z4Y8 100 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 OR1B1Q8NGR6 318 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 OR51B2Q9Y5P1 312 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.02□□□□□ -0.97
CUX1-204ENST00000393824 C7orf71A4D174 169 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 GPR6P46095 362 aaPredicted RBP9.02□□□□□ -0.97
CUX1-204ENST00000393824 RAB9AP51151 201 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 SEC11AP67812 179 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 FAM169BQ8N8A8 192 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 C5orf17Q8NAS9 161 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 RNASE6Q93091 150 aaKnown RBP9.02□□□□□ -0.97
CUX1-204ENST00000393824 COQ2Q96H96 371 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 CHRDL1Q9BU40 450 aa9.02□□□□□ -0.97
CUX1-204ENST00000393824 SSBP3Q9BWW4 388 aaPredicted RBP9.02□□□□□ -0.97
CUX1-204ENST00000393824 SPG11Q96JI7 2443 aa9.01□□□□□ -0.97
CUX1-204ENST00000393824 TRAV26-1A0A087WT03 109 aa9.01□□□□□ -0.97
CUX1-204ENST00000393824 A0A1B0GXF2 115 aa9.01□□□□□ -0.97
CUX1-204ENST00000393824 SPINT2O43291 252 aa9.01□□□□□ -0.97
CUX1-204ENST00000393824 LEPROTL1O95214 131 aa9.01□□□□□ -0.97
CUX1-204ENST00000393824 PLAUP00749 431 aa9.01□□□□□ -0.97
CUX1-204ENST00000393824 GPR183P32249 361 aa9.01□□□□□ -0.97
CUX1-204ENST00000393824 KIR2DS2P43631 304 aa9.01□□□□□ -0.97
CUX1-204ENST00000393824 NABP2Q9BQ15 211 aa9.01□□□□□ -0.97
CUX1-204ENST00000393824 C19orf24Q9BVV8 132 aa9.01□□□□□ -0.97
CUX1-204ENST00000393824 HCFC1P51610 2035 aa9.01□□□□□ -0.97
CUX1-204ENST00000393824 CACNA1DQ01668 2161 aa9.01□□□□□ -0.97
CUX1-204ENST00000393824 IGHV1-24A0A0C4DH33 117 aa9□□□□□ -0.97
CUX1-204ENST00000393824 PROP1O75360 226 aa9□□□□□ -0.97
CUX1-204ENST00000393824 ACTL6BO94805 426 aa9□□□□□ -0.97
CUX1-204ENST00000393824 OR5AL1P0C617 328 aa9□□□□□ -0.97
CUX1-204ENST00000393824 IGFBP2P18065 325 aa9□□□□□ -0.97
CUX1-204ENST00000393824 AZU1P20160 251 aa9□□□□□ -0.97
CUX1-204ENST00000393824 ERVK-16P61578 105 aa9□□□□□ -0.97
CUX1-204ENST00000393824 AESQ08117 197 aa9□□□□□ -0.97
CUX1-204ENST00000393824 Q6ZR03 302 aa9□□□□□ -0.97
CUX1-204ENST00000393824 NEGR1Q7Z3B1 354 aa9□□□□□ -0.97
CUX1-204ENST00000393824 NHLRC2Q8NBF2 726 aa9□□□□□ -0.97
CUX1-204ENST00000393824 PMCHL2Q9BQD1 86 aa9□□□□□ -0.97
CUX1-204ENST00000393824 PLEKHA3Q9HB20 300 aa9□□□□□ -0.97
CUX1-204ENST00000393824 ZNF355PQ9NSJ1 428 aa9□□□□□ -0.97
CUX1-204ENST00000393824 TCF19Q9Y242 345 aa9□□□□□ -0.97
CUX1-204ENST00000393824 GCN1Q92616 2671 aaKnown RBP9□□□□□ -0.97
CUX1-204ENST00000393824 A0A087X0K7 114 aa9□□□□□ -0.97
CUX1-204ENST00000393824 FCGR3BO75015 233 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms