RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 RD3LP0DJH9 198 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 PSG1P11464 419 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 RPL35AP18077 110 aaKnown RBP5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 NPPCP23582 126 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 GPX4P36969 197 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 P2RY1P47900 373 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 PAX9P55771 341 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 RAB11AP62491 216 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 ID3Q02535 119 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 MZT2BQ6NZ67 158 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 ACOT7LQ6ZUV0 252 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 NRARPQ7Z6K4 114 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 ZBTB8BQ8NAP8 495 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 OR51G1Q8NGK1 321 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 ENKURQ8TC29 256 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 ZNF431Q8TF32 576 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 Q8WTZ3 238 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 WWC2-AS2Q96NR7 200 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 PBDC1Q9BVG4 233 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 MS4A6AQ9H2W1 248 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 ZMAT4Q9H898 229 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 BATF3Q9NR55 127 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 PSENENQ9NZ42 101 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 RCL1Q9Y2P8 373 aaKnown RBP5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 STRAPQ9Y3F4 350 aaKnown RBP5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 C5orf51A6NDU8 294 aa5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 MBPP02686 304 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 HNRNPCP07910 306 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 METTL15P1P0C7V9 234 aa5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 GATA2P23769 480 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 CRYBB3P26998 211 aa5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 YPEL3P61236 119 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 RRAS2P62070 204 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 LEMD1Q68G75 181 aa5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 OR8G2PQ6IF36 304 aa5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 TMEM182Q6ZP80 229 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 C12orf45Q8N5I9 185 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 STXBP6Q8NFX7 210 aa5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 RNF125Q96EQ8 232 aa5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 CIB3Q96Q77 187 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 SPATA25Q9BR10 227 aa5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 GGTLC1Q9BX51 225 aa5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 MAP6D1Q9H9H5 199 aa5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 RABAC1Q9UI14 185 aa5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 LSM5Q9Y4Y9 91 aaKnown RBP5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 RYR3Q15413 4870 aa5.69□□□□□ -1.5
HMGB3P1-201ENST00000393368 SORL1Q92673 2214 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 LOC102724200A0A096LPH7 203 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 SMCO3A2RU48 225 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 PMS2P5A8MQ11 134 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 K7EPK0 472 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 DNASE2O00115 360 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 SIX6O95475 246 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 ATP5IP56385 69 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 LYZP61626 148 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 RPP30P78346 268 aaKnown RBP5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 AKR1C1Q04828 323 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 STPG3Q8N7X2 389 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 THAP8Q8NA92 274 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 GLMPQ8WWB7 406 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 SMIM8Q96KF7 97 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 U3KQE9 123 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 NBEAL2Q6ZNJ1 2754 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 CSMD3Q7Z407 3707 aa5.68□□□□□ -1.5
HMGB3P1-201ENST00000393368 DYNC2H1Q8NCM8 4307 aaKnown RBP5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 STAB2Q8WWQ8 2551 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 A0A1W2PS18 150 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 C7orf66A4D0T2 115 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 ZNF688P0C7X2 276 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 BMI1P35226 326 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 DEFB131AP59861 70 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 S100A10P60903 97 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 PAFAH1B2P68402 229 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 ARL16Q0P5N6 197 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 C16orf54Q6UWD8 224 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 TMEM14EPQ6UXP3 125 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 GRAMD2BQ96HH9 432 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 NARS2Q96I59 477 aaKnown RBP5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 TMEM231Q9H6L2 316 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 DOK5Q9P104 306 aa5.67□□□□□ -1.5
HMGB3P1-201ENST00000393368 FAM24AA6NFZ4 105 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 KNCNA6PVL3 124 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 INMT-MINDY4F8WBC2 141 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 K7EQG2 157 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 L7N2F9 121 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 GOSR2O14653 212 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 BUB3O43684 328 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 IL5P05113 134 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 EIF2B2P49770 351 aaKnown RBP5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 BCAP31P51572 246 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 DEFB1P60022 68 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 VAMP2P63027 116 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 SLC38A11Q08AI6 406 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 RAB32Q13637 225 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 DEFB135Q30KP9 77 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 ZFAND6Q6FIF0 208 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 SIGLEC15Q6ZMC9 328 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 DCANP1Q8TF63 244 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 PPP1R14BQ96C90 147 aa5.66□□□□□ -1.5
HMGB3P1-201ENST00000393368 C2orf50Q96LR7 162 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms