RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 RNASE6Q93091 150 aaKnown RBP8.62□□□□□ -1.03
CALD1-203ENST00000393118 TXNDC17Q9BRA2 123 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 RAB1BQ9H0U4 201 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 TRAV9-2A0A087WT02 112 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 PPIAL4CA0A0B4J2A2 164 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 TEX50A0A1B0GTY4 177 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 C7orf71A4D174 169 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 K7EQM0 130 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 PPIAL4GP0DN37 164 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 FABP2P12104 132 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 MC5RP33032 325 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 C17orf58Q2M2W7 97 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 TMEM200BQ69YZ2 307 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 ADAMTS20P59510 1910 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 SAP30O75446 220 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 FOXA3P55318 350 aaPredicted RBP8.61□□□□□ -1.03
CALD1-203ENST00000393118 IBA57Q5T440 356 aaKnown RBP8.61□□□□□ -1.03
CALD1-203ENST00000393118 TMEM144Q7Z5S9 345 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 MAP1LC3CQ9BXW4 147 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 S4R3C0 116 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 MT-ND6P03923 174 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 STAG3L2P0CL84 134 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 STAG3L3P0CL85 134 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 CD24P25063 80 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 LINC01551Q86U37 167 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 PNKDQ8N490 385 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 SPTBN4Q9H254 2564 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 TRAV5A0A0B4J249 113 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 LOXL3P58215 753 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 PRCDQ00LT1 54 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 IGFL2Q6UWQ7 119 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 TEX43Q6ZNM6 134 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 OR52E5Q8NH55 327 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 ZC2HC1AQ96GY0 325 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 FBXL15Q9H469 300 aa8.61□□□□□ -1.03
CALD1-203ENST00000393118 PGPA6NDG6 321 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 F2Z2F3 143 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 LEPROTL1O95214 131 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 APOBEC3AP31941 199 aaPredicted RBP8.6□□□□□ -1.03
CALD1-203ENST00000393118 SIGMAR1Q99720 223 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 RNASE7Q9H1E1 156 aaKnown RBP8.6□□□□□ -1.03
CALD1-203ENST00000393118 AMMECR1Q9Y4X0 333 aaPredicted RBP8.6□□□□□ -1.03
CALD1-203ENST00000393118 F11RQ9Y624 299 aaKnown RBP8.6□□□□□ -1.03
CALD1-203ENST00000393118 SPCS1Q9Y6A9 102 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 LY6HO94772 140 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 PYYP10082 97 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 MEF2CQ06413 473 aaPredicted RBP8.6□□□□□ -1.03
CALD1-203ENST00000393118 UTF1Q5T230 341 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 FAM222BQ8WU58 562 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 RASL11BQ9BPW5 248 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 TNRC6AQ8NDV7 1962 aaKnown RBP8.6□□□□□ -1.03
CALD1-203ENST00000393118 FREM2Q5SZK8 3169 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 CHD8Q9HCK8 2581 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 HLA-DQA1P01909 254 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 GPR6P46095 362 aaPredicted RBP8.6□□□□□ -1.03
CALD1-203ENST00000393118 NMUP48645 174 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 PET117Q6UWS5 81 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 OR8A1Q8NGG7 326 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 WFDC12Q8WWY7 111 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 PERPQ96FX8 193 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 SCRT1Q9BWW7 348 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 IL36BQ9NZH7 164 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 FOXA2Q9Y261 457 aaPredicted RBP8.6□□□□□ -1.03
CALD1-203ENST00000393118 FAM208BQ5VWN6 2430 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 A0A087X0K7 114 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 GPX1P07203 203 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 COA6Q5JTJ3 125 aaKnown RBP8.6□□□□□ -1.03
CALD1-203ENST00000393118 FAM169BQ8N8A8 192 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 TMEM70Q9BUB7 260 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 HSPB8Q9UJY1 196 aa8.6□□□□□ -1.03
CALD1-203ENST00000393118 YTHDF2Q9Y5A9 579 aaKnown RBP8.6□□□□□ -1.03
CALD1-203ENST00000393118 ACACBO00763 2458 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 TMEM178BH3BS89 294 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 CKS1BP61024 79 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 LINC00305Q7Z4B0 112 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 FAM90A9PA6NNJ1 464 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 CORTO00230 105 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 VDAC2P45880 294 aaPredicted RBP8.59□□□□□ -1.03
CALD1-203ENST00000393118 PSG9Q00887 426 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 FAM162BQ5T6X4 162 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 C16orf54Q6UWD8 224 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 FA2HQ7L5A8 372 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 KIAA1549Q9HCM3 1950 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 IGHV2-70DA0A0C4DH43 119 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 hDV102S1A0JD36 115 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 B9A039 149 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 GCSHP23434 173 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 BRWD1-AS2P59051 145 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 PAX2Q02962 417 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 CD69Q07108 199 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 IGFL3Q6UXB1 125 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 MCRIP2Q9BUT9 160 aaKnown RBP8.59□□□□□ -1.03
CALD1-203ENST00000393118 CLEC7AQ9BXN2 247 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 THYN1Q9P016 225 aa8.59□□□□□ -1.03
CALD1-203ENST00000393118 IGLV3-9A0A075B6K5 115 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 SLC25A48Q6ZT89 311 aaKnown RBP8.58□□□□□ -1.04
CALD1-203ENST00000393118 YPEL4Q96NS1 127 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 FRYQ5TBA9 3013 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 PROP1O75360 226 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 CA1P00915 261 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms