RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 YIPF3Q9GZM5 350 aa0.93□□□□□ -2.26
SNORA48.1-201ENST00000390879 C6orf62Q9GZU0 229 aaPredicted RBP0.93□□□□□ -2.26
SNORA48.1-201ENST00000390879 TMEM126AQ9H061 195 aa0.93□□□□□ -2.26
SNORA48.1-201ENST00000390879 CST9LQ9H4G1 147 aa0.93□□□□□ -2.26
SNORA48.1-201ENST00000390879 LRTM1Q9HBL6 345 aa0.93□□□□□ -2.26
SNORA48.1-201ENST00000390879 TAS2R4Q9NYW5 299 aa0.93□□□□□ -2.26
SNORA48.1-201ENST00000390879 LAMTOR3Q9UHA4 124 aa0.93□□□□□ -2.26
SNORA48.1-201ENST00000390879 NAT8BQ9UHF3 227 aa0.93□□□□□ -2.26
SNORA48.1-201ENST00000390879 NUBP2Q9Y5Y2 271 aa0.93□□□□□ -2.26
SNORA48.1-201ENST00000390879 PBRM1Q86U86 1689 aa0.93□□□□□ -2.26
SNORA48.1-201ENST00000390879 SLIT2O94813 1529 aa0.93□□□□□ -2.26
SNORA48.1-201ENST00000390879 NOTCH2Q04721 2471 aa0.93□□□□□ -2.26
SNORA48.1-201ENST00000390879 TICRRQ7Z2Z1 1910 aa0.93□□□□□ -2.26
SNORA48.1-201ENST00000390879 NACADO15069 1562 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 RTEL1-TNFRSF6BF6WH68 1400 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 RIC1Q4ADV7 1423 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 SETD5Q9C0A6 1442 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 IGLV3-9A0A075B6K5 115 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 TRDV1A0A1B0GX56 115 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 ARL5CA6NH57 179 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 LY6LH3BQJ8 138 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 LYZL6O75951 148 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 CST7O76096 145 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 C1QCP02747 245 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 OR10J4P0C629 311 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 ASAH2BP0C7U1 165 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 ZNF705BP0CI00 300 aaPredicted RBP0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 BCL2P10415 239 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 HLA-EP13747 358 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 RPS3P23396 243 aaKnown RBP eCLIP0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 POLR2HP52434 150 aaKnown RBP0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 RAB4BP61018 213 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 MYL5Q02045 173 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 PLCXD2Q0VAA5 305 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 ZNF846Q147U1 533 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 ESRGQ1W209 222 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 TOMM20LQ6UXN7 152 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 DEFB128Q7Z7B8 93 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 Q8IYB0 196 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 C9orf163Q8N9P6 203 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 OR4D11Q8NGI4 311 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 OR9Q1Q8NGQ5 310 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 SPACA4Q8TDM5 124 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 ZNF418Q8TF45 676 aaPredicted RBP0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 LZICQ8WZA0 190 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 CACYBPQ9HB71 228 aaKnown RBP0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 LAMTOR2Q9Y2Q5 125 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 MED31Q9Y3C7 131 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 ADGRB3O60242 1522 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 TOPBP1Q92547 1522 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 KIF26AQ9ULI4 1882 aaPredicted RBP0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 TRIP11Q15643 1979 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 UNC13AQ9UPW8 1703 aa0.92□□□□□ -2.26
SNORA48.1-201ENST00000390879 TECPR2O15040 1411 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 SVILO95425 2214 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 CHD5Q8TDI0 1954 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 RER1O15258 196 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 UBL3O95164 117 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 FAM107AO95990 144 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 CRPP02741 224 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 MT-ND6P03923 174 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 SCGB1A1P11684 91 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 CMPK1P30085 196 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 SDC2P34741 201 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 FUSP35637 526 aaKnown RBP eCLIP0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 SSR2P43308 183 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 KRTAP10-10P60014 251 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 HBBP68871 147 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 EIF3IQ13347 325 aaKnown RBP0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 SPANXN5Q5MJ07 72 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 ZNF826PQ6ZT77 177 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 PRR15Q8IV56 129 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 TEX29Q8N6K0 151 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 LINC00301Q8NCQ3 95 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 OR2T35Q8NGX2 323 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 RNASE11Q8TAA1 199 aaKnown RBP0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 CHCHD1Q96BP2 118 aaKnown RBP0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 RETNLBQ9BQ08 111 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 CXCL16Q9H2A7 254 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 NHP2Q9NX24 153 aaKnown RBP0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 GSKIPQ9P0R6 139 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 HS3ST2Q9Y278 367 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 LHFPL6Q9Y693 200 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 ARHGEF10O15013 1369 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 SCN4AP35499 1836 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 ATAD5Q96QE3 1844 aa0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 MED1Q15648 1581 aaPredicted RBP0.91□□□□□ -2.26
SNORA48.1-201ENST00000390879 SEC16AO15027 2179 aa0.9□□□□□ -2.26
SNORA48.1-201ENST00000390879 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.9□□□□□ -2.27
SNORA48.1-201ENST00000390879 ITGB4P16144 1822 aa0.9□□□□□ -2.27
SNORA48.1-201ENST00000390879 A0A087WX48 190 aa0.9□□□□□ -2.27
SNORA48.1-201ENST00000390879 TRAV14DV4A0A0A6YYC5 116 aa0.9□□□□□ -2.27
SNORA48.1-201ENST00000390879 A8MWV9 139 aa0.9□□□□□ -2.27
SNORA48.1-201ENST00000390879 J3KT08 172 aa0.9□□□□□ -2.27
SNORA48.1-201ENST00000390879 OVOL1O14753 267 aa0.9□□□□□ -2.27
SNORA48.1-201ENST00000390879 DEGS1O15121 323 aa0.9□□□□□ -2.27
SNORA48.1-201ENST00000390879 HIST1H2BKO60814 126 aa0.9□□□□□ -2.27
SNORA48.1-201ENST00000390879 PROSCO94903 275 aa0.9□□□□□ -2.27
SNORA48.1-201ENST00000390879 HIST1H2BJP06899 126 aa0.9□□□□□ -2.27
SNORA48.1-201ENST00000390879 NDUFA6P56556 154 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms