RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 MED1Q15648 1581 aaPredicted RBP0.79□□□□□ -2.28
SNORA40.2-201ENST00000390847 EML6Q6ZMW3 1958 aa0.78□□□□□ -2.28
SNORA40.2-201ENST00000390847 NCR3O14931 201 aa0.78□□□□□ -2.28
SNORA40.2-201ENST00000390847 SRP14P37108 136 aaKnown RBP0.78□□□□□ -2.28
SNORA40.2-201ENST00000390847 MYL6P60660 151 aa0.78□□□□□ -2.28
SNORA40.2-201ENST00000390847 DYNLT1P63172 113 aa0.78□□□□□ -2.28
SNORA40.2-201ENST00000390847 SPA17Q15506 151 aa0.78□□□□□ -2.28
SNORA40.2-201ENST00000390847 TMEM254Q8TBM7 123 aa0.78□□□□□ -2.28
SNORA40.2-201ENST00000390847 PLB1Q6P1J6 1458 aa0.78□□□□□ -2.28
SNORA40.2-201ENST00000390847 LAMB4A4D0S4 1761 aa0.78□□□□□ -2.29
SNORA40.2-201ENST00000390847 CCL25O15444 150 aa0.77□□□□□ -2.29
SNORA40.2-201ENST00000390847 SRIP30626 198 aa0.77□□□□□ -2.29
SNORA40.2-201ENST00000390847 Q8N6K4 173 aa0.77□□□□□ -2.29
SNORA40.2-201ENST00000390847 ST6GALNAC3Q8NDV1 305 aa0.77□□□□□ -2.29
SNORA40.2-201ENST00000390847 OR52L1Q8NGH7 329 aa0.77□□□□□ -2.29
SNORA40.2-201ENST00000390847 OR2T35Q8NGX2 323 aa0.77□□□□□ -2.29
SNORA40.2-201ENST00000390847 KIFC1Q9BW19 673 aa0.77□□□□□ -2.29
SNORA40.2-201ENST00000390847 ZNF469Q96JG9 3925 aaPredicted RBP0.77□□□□□ -2.29
SNORA40.2-201ENST00000390847 PIK3C2GO75747 1445 aa0.77□□□□□ -2.29
SNORA40.2-201ENST00000390847 ADGRB2O60241 1585 aa0.77□□□□□ -2.29
SNORA40.2-201ENST00000390847 ECM29Q5VYK3 1845 aa0.77□□□□□ -2.29
SNORA40.2-201ENST00000390847 TENM3Q9P273 2699 aa0.77□□□□□ -2.29
SNORA40.2-201ENST00000390847 ZFYVE9O95405 1425 aa0.76□□□□□ -2.29
SNORA40.2-201ENST00000390847 TMEM114B3SHH9 223 aa0.76□□□□□ -2.29
SNORA40.2-201ENST00000390847 HAND1O96004 215 aa0.76□□□□□ -2.29
SNORA40.2-201ENST00000390847 ERP29P30040 261 aaKnown RBP0.76□□□□□ -2.29
SNORA40.2-201ENST00000390847 BTF3L4Q96K17 158 aa0.76□□□□□ -2.29
SNORA40.2-201ENST00000390847 SIGMAR1Q99720 223 aa0.76□□□□□ -2.29
SNORA40.2-201ENST00000390847 TMEM133Q9H2Q1 129 aa0.76□□□□□ -2.29
SNORA40.2-201ENST00000390847 RNF122Q9H9V4 155 aa0.76□□□□□ -2.29
SNORA40.2-201ENST00000390847 TCRBV4S1A1TA0A5B7 111 aa0.75□□□□□ -2.29
SNORA40.2-201ENST00000390847 TIMM17BO60830 172 aa0.75□□□□□ -2.29
SNORA40.2-201ENST00000390847 DHFRP00374 187 aa0.75□□□□□ -2.29
SNORA40.2-201ENST00000390847 PSG9Q00887 426 aa0.75□□□□□ -2.29
SNORA40.2-201ENST00000390847 KRR1Q13601 381 aaKnown RBP0.75□□□□□ -2.29
SNORA40.2-201ENST00000390847 SPRNQ5BIV9 151 aa0.75□□□□□ -2.29
SNORA40.2-201ENST00000390847 GKN2Q86XP6 184 aa0.75□□□□□ -2.29
SNORA40.2-201ENST00000390847 GNPDA2Q8TDQ7 276 aa0.75□□□□□ -2.29
SNORA40.2-201ENST00000390847 GPER1Q99527 375 aa0.75□□□□□ -2.29
SNORA40.2-201ENST00000390847 TMEM14CQ9P0S9 112 aa0.75□□□□□ -2.29
SNORA40.2-201ENST00000390847 SLC22A13Q9Y226 551 aa0.75□□□□□ -2.29
SNORA40.2-201ENST00000390847 CCDC144AA2RUR9 1427 aa0.74□□□□□ -2.29
SNORA40.2-201ENST00000390847 NCOA1Q15788 1441 aa0.74□□□□□ -2.29
SNORA40.2-201ENST00000390847 TRBV6-4A0A1B0GX49 114 aa0.74□□□□□ -2.29
SNORA40.2-201ENST00000390847 CCL16O15467 120 aa0.74□□□□□ -2.29
SNORA40.2-201ENST00000390847 OR7C1O76099 320 aaPredicted RBP0.74□□□□□ -2.29
SNORA40.2-201ENST00000390847 SERPINB9P50453 376 aa0.74□□□□□ -2.29
SNORA40.2-201ENST00000390847 SBSPONQ8IVN8 264 aa0.74□□□□□ -2.29
SNORA40.2-201ENST00000390847 Q8IYB0 196 aa0.74□□□□□ -2.29
SNORA40.2-201ENST00000390847 STAG3L4Q8TBR4 150 aa0.74□□□□□ -2.29
SNORA40.2-201ENST00000390847 PATE1Q8WXA2 126 aa0.74□□□□□ -2.29
SNORA40.2-201ENST00000390847 NMNAT1Q9HAN9 279 aaPredicted RBP0.74□□□□□ -2.29
SNORA40.2-201ENST00000390847 TAS2R7Q9NYW3 318 aa0.74□□□□□ -2.29
SNORA40.2-201ENST00000390847 TRGV10A0A0A0MS01 117 aa0.73□□□□□ -2.29
SNORA40.2-201ENST00000390847 RNASE4P34096 147 aaKnown RBP0.73□□□□□ -2.29
SNORA40.2-201ENST00000390847 PIGPP57054 158 aa0.73□□□□□ -2.29
SNORA40.2-201ENST00000390847 CCL7P80098 99 aa0.73□□□□□ -2.29
SNORA40.2-201ENST00000390847 LINC00322Q6ZN03 302 aaPredicted RBP0.73□□□□□ -2.29
SNORA40.2-201ENST00000390847 PDZD9Q8IXQ8 264 aa0.73□□□□□ -2.29
SNORA40.2-201ENST00000390847 UCK1Q9HA47 277 aa0.73□□□□□ -2.29
SNORA40.2-201ENST00000390847 CEP192Q8TEP8 1941 aa0.73□□□□□ -2.29
SNORA40.2-201ENST00000390847 ZNF106Q9H2Y7 1883 aaKnown RBP0.73□□□□□ -2.29
SNORA40.2-201ENST00000390847 NDUFB3O43676 98 aa0.72□□□□□ -2.29
SNORA40.2-201ENST00000390847 KLF7O75840 302 aaPredicted RBP0.72□□□□□ -2.29
SNORA40.2-201ENST00000390847 RRN3P1Q2M238 152 aa0.72□□□□□ -2.29
SNORA40.2-201ENST00000390847 LIN52Q52LA3 116 aa0.72□□□□□ -2.29
SNORA40.2-201ENST00000390847 C2orf82Q6UX34 121 aa0.72□□□□□ -2.29
SNORA40.2-201ENST00000390847 YPEL2Q96QA6 119 aa0.72□□□□□ -2.29
SNORA40.2-201ENST00000390847 LINC00467Q9BRT7 94 aa0.72□□□□□ -2.29
SNORA40.2-201ENST00000390847 TMEM70Q9BUB7 260 aa0.72□□□□□ -2.29
SNORA40.2-201ENST00000390847 FAM32AQ9Y421 112 aaKnown RBP0.72□□□□□ -2.29
SNORA40.2-201ENST00000390847 CHCHD2Q9Y6H1 151 aaPredicted RBP0.72□□□□□ -2.29
SNORA40.2-201ENST00000390847 TAF1LQ8IZX4 1826 aa0.72□□□□□ -2.29
SNORA40.2-201ENST00000390847 RIMBP3CA6NJZ7 1639 aa0.71□□□□□ -2.3
SNORA40.2-201ENST00000390847 RIMBP3BA6NNM3 1639 aa0.71□□□□□ -2.3
SNORA40.2-201ENST00000390847 RIMBP3Q9UFD9 1639 aa0.71□□□□□ -2.3
SNORA40.2-201ENST00000390847 A0A1W2PPM0 123 aa0.71□□□□□ -2.3
SNORA40.2-201ENST00000390847 TLCD2A6NGC4 264 aa0.71□□□□□ -2.3
SNORA40.2-201ENST00000390847 EFNA4P52798 201 aa0.71□□□□□ -2.3
SNORA40.2-201ENST00000390847 BCL2L15Q5TBC7 163 aa0.71□□□□□ -2.3
SNORA40.2-201ENST00000390847 TP53RKQ96S44 253 aa0.71□□□□□ -2.3
SNORA40.2-201ENST00000390847 SLC25A21Q9BQT8 299 aaPredicted RBP0.71□□□□□ -2.3
SNORA40.2-201ENST00000390847 TLNRD1Q9H1K6 362 aa0.71□□□□□ -2.3
SNORA40.2-201ENST00000390847 PARVBQ9HBI1 364 aa0.71□□□□□ -2.3
SNORA40.2-201ENST00000390847 ORMDL1Q9P0S3 153 aa0.71□□□□□ -2.3
SNORA40.2-201ENST00000390847 TNRC6AQ8NDV7 1962 aaKnown RBP0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 SBF1O95248 1867 aa0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 TRAV4A0A0B4J268 109 aa0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 IGHV1-58A0A0C4DH39 117 aa0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 OR2T8A6NH00 312 aa0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 A8MWV9 139 aa0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 CST8O60676 142 aa0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 CD2P06729 351 aa0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 C22orf39Q6P5X5 142 aa0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 OR11H6Q8NGC7 330 aa0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 PRAP1Q96NZ9 151 aa0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 TMEM126AQ9H061 195 aa0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 ENY2Q9NPA8 101 aa0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 SCN3AQ9NY46 2000 aa0.7□□□□□ -2.3
SNORA40.2-201ENST00000390847 LAMA4Q16363 1823 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms