RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 POLDIP2Q9Y2S7 368 aa6.06□□□□□ -1.44
TRBV28-201ENST00000390400 RBM7Q9Y580 266 aaKnown RBP6.06□□□□□ -1.44
TRBV28-201ENST00000390400 OR51B2Q9Y5P1 312 aa6.06□□□□□ -1.44
TRBV28-201ENST00000390400 NBPF19A0A087WUL8 3843 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 ASH1LQ9NR48 2969 aaKnown RBP6.05□□□□□ -1.44
TRBV28-201ENST00000390400 MED13LQ71F56 2210 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 GAGE10A6NGK3 116 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 LRRC30A6NM36 301 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 PAGE4O60829 102 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 NXPH3O95157 252 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 P0C879 139 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 CRYBB3P26998 211 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 ATP5J2P56134 94 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 KRTDAPP60985 99 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 GNB1P62873 340 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 HTD2P86397 168 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 HIST1H1AQ02539 215 aaPredicted RBP6.05□□□□□ -1.44
TRBV28-201ENST00000390400 CATR1Q13166 79 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 SPRNQ5BIV9 151 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 OR8B3Q8NGG8 313 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 OR10V1Q8NGI7 309 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 RDH5Q92781 318 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 CHCHD1Q96BP2 118 aaKnown RBP6.05□□□□□ -1.44
TRBV28-201ENST00000390400 GRAMD2BQ96HH9 432 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 OR8B2Q96RD0 313 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 HDHD3Q9BSH5 251 aaPredicted RBP6.05□□□□□ -1.44
TRBV28-201ENST00000390400 HES4Q9HCC6 221 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 TMEM167BQ9NRX6 74 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.05□□□□□ -1.44
TRBV28-201ENST00000390400 ZNF581Q9P0T4 197 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 CACNG5Q9UF02 275 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 FBN2P35556 2912 aa6.05□□□□□ -1.44
TRBV28-201ENST00000390400 UBE2L5PA0A1B0GUS4 154 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 A0A1W2PPV4 95 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 A0A1W2PS18 150 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 SNURFLB1AK76 121 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 TRAPPC2LH3BP13 241 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 J3QR89 54 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 RAB29O14966 203 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 RBFOX2O43251 390 aaKnown RBP eCLIP6.04□□□□□ -1.44
TRBV28-201ENST00000390400 SPRY1O43609 319 aaPredicted RBP6.04□□□□□ -1.44
TRBV28-201ENST00000390400 SYNGR1O43759 233 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 ANGPTL7O43827 346 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 IGKV1D-33P01593 117 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 IGKV1-33P01594 117 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 IGHV4-39P01824 125 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 C3orf79P0CE67 100 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 CFHR2P36980 270 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 TFPI2P48307 235 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 FGF8P55075 233 aaPredicted RBP6.04□□□□□ -1.44
TRBV28-201ENST00000390400 PAX2Q02962 417 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 FOXI1Q12951 378 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 LDLRAD2Q5SZI1 272 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 SLC25A34Q6PIV7 304 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 WDR82Q6UXN9 313 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 ZNF826PQ6ZT77 177 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 FAM231DQ6ZW35 169 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 HAPLN4Q86UW8 402 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 C11orf53Q8IXP5 236 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 MMD2Q8IY49 270 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 Q8IYB0 196 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 FAM58AQ8N1B3 248 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 OR52E5Q8NH55 327 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 LRRC29Q8WV35 223 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 CCL17Q92583 94 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 TMEM191AQ9H0A3 160 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 VSIRQ9H7M9 311 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 GNB4Q9HAV0 340 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 RNF7Q9UBF6 113 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 PSG11Q9UQ72 335 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 MYO9AB2RTY4 2548 aa6.04□□□□□ -1.44
TRBV28-201ENST00000390400 IGKV1-12A0A0C4DH73 117 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 SMIM27A0A1W2PRY6 76 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 PMS2P5A8MQ11 134 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 G3V4G9 280 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 SIVA1O15304 175 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 ZNF207O43670 478 aaKnown RBP6.03□□□□□ -1.44
TRBV28-201ENST00000390400 NUPR1O60356 82 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 NDUFS7O75251 213 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 OR7C1O76099 320 aaPredicted RBP6.03□□□□□ -1.44
TRBV28-201ENST00000390400 LY6HO94772 140 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 CA2P00918 260 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 IGKV1D-12P01611 117 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 BCL3P20749 454 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 EDN2P20800 178 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 UBE2G1P62253 170 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 RAB31Q13636 194 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 DEFB113Q30KQ7 82 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 OR4A47Q6IF82 309 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 CLEC2AQ6UVW9 174 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 TMEM136Q6ZRR5 245 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 ZNF439Q8NDP4 499 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 TIMD4Q96H15 378 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 TMEM70Q9BUB7 260 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 ZNF430Q9H8G1 570 aaPredicted RBP6.03□□□□□ -1.44
TRBV28-201ENST00000390400 SLC25A22Q9H936 323 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 SPANXA1Q9NS26 97 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 MTCH1Q9NZJ7 389 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 NAT8BQ9UHF3 227 aa6.03□□□□□ -1.44
TRBV28-201ENST00000390400 DOCK11Q5JSL3 2073 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms