RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 BUB1B-PAK6H3BSN5 160 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 ERC2-IT1O76042 136 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 FADS2O95864 444 aaKnown RBP-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 OR4E1P0C645 316 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 SPRR2BP35325 72 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 CDC34P49427 236 aaPredicted RBP-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 CLDN12P56749 244 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 ESPL1Q14674 2120 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 SYCP1Q15431 976 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 ZNHIT3Q15649 155 aaPredicted RBP-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 NKAIN1Q4KMZ8 207 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 TRAPPC6BQ86SZ2 158 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 Q8IYB0 196 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 GPATCH11Q8N954 259 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 GDPD1Q8N9F7 314 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 OR52R1Q8NGF1 315 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 OR13C4Q8NGS5 318 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 LRRC20Q8TCA0 184 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 KLK6Q92876 244 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 CCDC124Q96CT7 223 aaKnown RBP-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 DIRAS2Q96HU8 199 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 LIMD2Q9BT23 127 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 GGACTQ9BVM4 153 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 PBOV1Q9GZY1 135 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 MRPL27Q9P0M9 148 aaKnown RBP-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 TP53TG1Q9Y2A0 90 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 HERC1Q15751 4861 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 FLNBO75369 2602 aaKnown RBP-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 PIEZO2Q9H5I5 2752 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 CNOT1A5YKK6 2376 aaKnown RBP-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 MED1Q15648 1581 aaPredicted RBP-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 PLXND1Q9Y4D7 1925 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 TANC1Q9C0D5 1861 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 CSMD3Q7Z407 3707 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 DPRXA6NFQ7 191 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 IFNA10P01566 189 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 IL3P08700 152 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 S100A4P26447 101 aaKnown RBP-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 ANP32AP39687 249 aaKnown RBP-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 MT4P47944 62 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 DYNLT1P63172 113 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 XIAPP98170 497 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 EIF3IQ13347 325 aaKnown RBP-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 PPP1R1AQ13522 171 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 RSU1Q15404 277 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 TSNQ15631 228 aaKnown RBP-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 ZNF56Q15929 161 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 BATFQ16520 125 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 DEFB109BQ30KR1 87 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 C8orf74Q6P047 294 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 LPCAT3Q6P1A2 487 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 ST13P4Q8IZP2 240 aaPredicted RBP-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 OR5AS1Q8N127 324 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 C10orf111Q8N326 155 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 DEFB125Q8N687 156 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 TMEM161BQ8NDZ6 487 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 SLC30A7Q8NEW0 376 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 OR10AG1Q8NH19 301 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 ZNF75CPQ92670 426 aaPredicted RBP-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 SLAMF6Q96DU3 332 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 MALSU1Q96EH3 234 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 HIST1H2BLQ99880 126 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 DHRS9Q9BPW9 319 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 PARD6GQ9BYG4 376 aaPredicted RBP-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 OR51I2Q9H344 312 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 C11orf68Q9H3H3 251 aaKnown RBP-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 FBXL12Q9NXK8 326 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 RABL2BQ9UNT1 228 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 POFUT2Q9Y2G5 429 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 CHD6Q8TD26 2715 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 RIMBP3CA6NJZ7 1639 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 RIMBP3BA6NNM3 1639 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 RIMBP3Q9UFD9 1639 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 DOCK5Q9H7D0 1870 aa-0.58□□□□□ -2.5
SNORD28-201ENST00000384706 KMT2CQ8NEZ4 4911 aaKnown RBP-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 HECW1Q76N89 1606 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 MYLKQ15746 1914 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 A0A087X0T9 212 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 TINCRA0A1B0GVN0 87 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 A0A1W2PRS3 328 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 FTCDNL1E5RQL4 147 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 E7EUB6 86 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 PIRO00625 290 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 SULT1C4O75897 302 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 HAND1O96004 215 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 CSTAP01040 98 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 HLA-DRAP01903 254 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 RD3LP0DJH9 198 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 CD79AP11912 226 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 SYT1P21579 422 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 AP2S1P53680 142 aaPredicted RBP-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 DSCR4P56555 118 aaPredicted RBP-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 YPEL3P61236 119 aaPredicted RBP-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 RHOBP62745 196 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 SPAG11BQ08648 103 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 SLAMF1Q13291 335 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 XAF1Q6GPH4 301 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 DNM1P34Q6PK57 102 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 COMMD7Q86VX2 200 aa-0.59□□□□□ -2.5
SNORD28-201ENST00000384706 LRRC25Q8N386 305 aaPredicted RBP-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms