RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 PSG3Q16557 428 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 ADAMTSL5Q6ZMM2 481 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 TIMM21Q9BVV7 248 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 PILRAQ9UKJ1 303 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 ABCA3Q99758 1704 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 F8VVB4 439 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 F8VWA3 439 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 SP9P0CG40 484 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 IGHV1-2P23083 117 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 TSKUQ8WUA8 353 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 SMPXQ9UHP9 88 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 SCN5AQ14524 2016 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 PAPPA2Q9BXP8 1791 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 ZNF561-AS1K7EIQ3 104 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 TIMM23O14925 209 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 IGHG3P01860 377 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 EFNB3Q15768 340 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 TMEM133Q9H2Q1 129 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 LOC102723996A0A087X1L8 192 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 MMP23AO75900 390 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 DEFB130BP0DP73 79 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 DEFB130AP0DP74 79 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 THAP8Q8NA92 274 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 PDCD11Q14690 1871 aaKnown RBP4.87□□□□□ -1.63
RFX3-204ENST00000382004 PSG1P11464 419 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 SRSF3P84103 164 aaKnown RBP4.87□□□□□ -1.63
RFX3-204ENST00000382004 KIR3DS1Q14943 382 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 TM2D1Q9BX74 207 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 ZNF319Q9P2F9 582 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 VCYO14598 125 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 PRB2P02812 416 aaPredicted RBP4.86□□□□□ -1.63
RFX3-204ENST00000382004 LYZL1Q6UWQ5 148 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 SLC25A28Q96A46 364 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 A0A087WWL8 130 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 HIST1H2BKO60814 126 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 HIST1H2BJP06899 126 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 HIST1H2BOP23527 126 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 HIST1H2BBP33778 126 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 HIST1H2BDP58876 126 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 HIST1H2BCP62807 126 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 CFHR3Q02985 330 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 HIST2H2BEQ16778 126 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.86□□□□□ -1.63
RFX3-204ENST00000382004 HIST1H2BHQ93079 126 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 HIST1H2BNQ99877 126 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 HIST1H2BMQ99879 126 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 COLQQ9Y215 455 aaPredicted RBP4.86□□□□□ -1.63
RFX3-204ENST00000382004 SMKR1H3BMG3 65 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 CMC4P56277 68 aaPredicted RBP4.86□□□□□ -1.63
RFX3-204ENST00000382004 SAP25Q8TEE9 199 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 NEUROG3Q9Y4Z2 214 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 RREB1Q92766 1687 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 MORN2Q502X0 79 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 RASL11AQ6T310 242 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 SLC25A39Q9BZJ4 359 aaPredicted RBP4.86□□□□□ -1.63
RFX3-204ENST00000382004 TNFSF13O75888 250 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 TIAF1O95411 115 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 THBDP07204 575 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 CEACAM1P13688 526 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 TCF15Q12870 199 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 KLF17Q5JT82 389 aaPredicted RBP4.86□□□□□ -1.63
RFX3-204ENST00000382004 HAPLN4Q86UW8 402 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 C14orf178Q8N769 122 aaPredicted RBP4.86□□□□□ -1.63
RFX3-204ENST00000382004 TMEM158Q8WZ71 300 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 C18orf12Q96KH6 178 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 PFN2P35080 140 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 C15orf32Q32M92 178 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 PLPPR1Q8TBJ4 325 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 MCRIP2Q9BUT9 160 aaKnown RBP4.86□□□□□ -1.63
RFX3-204ENST00000382004 LOC105371267A0A1B0GV96 52 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 TRACP01848 142 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 FREM3P0C091 2139 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 LCN12Q6JVE5 192 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 LINC01549A6NIU2 74 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 YPEL1O60688 119 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 PMVKQ15126 192 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 BMPERQ8N8U9 685 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 YPEL2Q96QA6 119 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 ZNF831Q5JPB2 1677 aa4.86□□□□□ -1.63
RFX3-204ENST00000382004 A0A0G2JMM0 328 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 A0A1W2PPB8 328 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 KIR3DP1A8MWS1 328 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 MLNRO43193 412 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 SELLP14151 372 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 TIMP3P35625 211 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 CHAC1Q9BUX1 264 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 TUBGCP6Q96RT7 1819 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 CD200R1LQ6Q8B3 271 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 KLHL30-AS1Q8NEE0 82 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 Q8TAT8 98 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 HIST1H2BLQ99880 126 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 MED12Q93074 2177 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 IQCF6A8MYZ5 107 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 SH2D1AO60880 128 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 KLRD1Q13241 179 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 LINC01590Q5TEZ4 76 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 RNASE6Q93091 150 aaKnown RBP4.85□□□□□ -1.63
RFX3-204ENST00000382004 DSCR8Q96T75 97 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 RGPD4Q7Z3J3 1758 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 IGKV1D-13A0A0B4J2D9 117 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms