RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 GHRHP01286 108 aa12.08□□□□□ -0.48
PRDM16-203ENST00000378391 FAM216BQ8N7L0 139 aa12.08□□□□□ -0.48
PRDM16-203ENST00000378391 BRK1Q8WUW1 75 aa12.08□□□□□ -0.48
PRDM16-203ENST00000378391 IGHV2OR16-5A0A0B4J2B6 119 aa12.08□□□□□ -0.48
PRDM16-203ENST00000378391 UBE2L6O14933 153 aa12.08□□□□□ -0.48
PRDM16-203ENST00000378391 ATP1A1-AS1Q5TC04 95 aa12.08□□□□□ -0.48
PRDM16-203ENST00000378391 LOC102723996A0A087X1L8 192 aa12.08□□□□□ -0.48
PRDM16-203ENST00000378391 UPK2O00526 184 aa12.08□□□□□ -0.48
PRDM16-203ENST00000378391 GATA2P23769 480 aaPredicted RBP12.08□□□□□ -0.48
PRDM16-203ENST00000378391 PSG3Q16557 428 aa12.08□□□□□ -0.48
PRDM16-203ENST00000378391 RNASE7Q9H1E1 156 aaKnown RBP12.08□□□□□ -0.48
PRDM16-203ENST00000378391 IGHV3-35A0A0C4DH35 117 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 C15orf61A6NNL5 157 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 GNB1LQ9BYB4 327 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 U3KQE9 123 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 GGTLC3B5MD39 225 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 CD55P08174 381 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 IGKV3D-15A0A087WSY6 115 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 IGKV3-15P01624 115 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 IGHV2-5P01817 119 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 OCC1Q8TAD7 63 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 SLC25A2Q9BXI2 301 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 Q9H3A6 140 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 C21orf62Q9NYP8 219 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 C5orf63A6NC05 138 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 FAM90A9PA6NNJ1 464 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 APOBEC3AP31941 199 aaPredicted RBP12.07□□□□□ -0.48
PRDM16-203ENST00000378391 TEX38Q6PEX7 206 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 FDCSPQ8NFU4 85 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 MS4A6AQ9H2W1 248 aa12.07□□□□□ -0.48
PRDM16-203ENST00000378391 LRRK1Q38SD2 2015 aa12.06□□□□□ -0.48
PRDM16-203ENST00000378391 DOCK9Q9BZ29 2069 aa12.06□□□□□ -0.48
PRDM16-203ENST00000378391 FAM74A4Q5TZK3 123 aa12.06□□□□□ -0.48
PRDM16-203ENST00000378391 C2orf82Q6UX34 121 aa12.06□□□□□ -0.48
PRDM16-203ENST00000378391 Q8NFD4 153 aa12.06□□□□□ -0.48
PRDM16-203ENST00000378391 KIAA1549LQ6ZVL6 1849 aa12.06□□□□□ -0.48
PRDM16-203ENST00000378391 RBMY1BA6NDE4 496 aaKnown RBP12.06□□□□□ -0.48
PRDM16-203ENST00000378391 RBMY1EA6NEQ0 496 aaKnown RBP12.06□□□□□ -0.48
PRDM16-203ENST00000378391 RBMY1DP0C7P1 496 aaKnown RBP12.06□□□□□ -0.48
PRDM16-203ENST00000378391 RBMY1A1P0DJD3 496 aaKnown RBP12.06□□□□□ -0.48
PRDM16-203ENST00000378391 RBMY1CP0DJD4 496 aa12.06□□□□□ -0.48
PRDM16-203ENST00000378391 RAX2Q96IS3 184 aa12.06□□□□□ -0.48
PRDM16-203ENST00000378391 MRPL20Q9BYC9 149 aaKnown RBP12.06□□□□□ -0.48
PRDM16-203ENST00000378391 COLQQ9Y215 455 aaPredicted RBP12.06□□□□□ -0.48
PRDM16-203ENST00000378391 FOXA2Q9Y261 457 aaPredicted RBP12.06□□□□□ -0.48
PRDM16-203ENST00000378391 PKIGQ9Y2B9 76 aa12.06□□□□□ -0.48
PRDM16-203ENST00000378391 OTORQ9NRC9 128 aa12.06□□□□□ -0.48
PRDM16-203ENST00000378391 IGHV1-2P23083 117 aa12.06□□□□□ -0.48
PRDM16-203ENST00000378391 RRN3P1Q2M238 152 aa12.06□□□□□ -0.48
PRDM16-203ENST00000378391 LHX2P50458 406 aa12.05□□□□□ -0.48
PRDM16-203ENST00000378391 SNRPD3P62318 126 aaKnown RBP12.05□□□□□ -0.48
PRDM16-203ENST00000378391 CSTL1Q9H114 145 aa12.05□□□□□ -0.48
PRDM16-203ENST00000378391 ANAPC10Q9UM13 185 aa12.05□□□□□ -0.48
PRDM16-203ENST00000378391 CD5LO43866 347 aa12.05□□□□□ -0.48
PRDM16-203ENST00000378391 EFNA2O43921 213 aa12.05□□□□□ -0.48
PRDM16-203ENST00000378391 ZNF883P0CG24 379 aa12.05□□□□□ -0.48
PRDM16-203ENST00000378391 CRYGSP22914 178 aa12.05□□□□□ -0.48
PRDM16-203ENST00000378391 MORN2Q502X0 79 aa12.05□□□□□ -0.48
PRDM16-203ENST00000378391 FAM201AQ5SY85 155 aa12.05□□□□□ -0.48
PRDM16-203ENST00000378391 KIF26AQ9ULI4 1882 aaPredicted RBP12.05□□□□□ -0.48
PRDM16-203ENST00000378391 SAA1P0DJI8 122 aaPredicted RBP12.05□□□□□ -0.48
PRDM16-203ENST00000378391 OR9G4Q8NGQ1 327 aa12.05□□□□□ -0.48
PRDM16-203ENST00000378391 SCGB3A1Q96QR1 104 aa12.05□□□□□ -0.48
PRDM16-203ENST00000378391 PRB4P10163 310 aaPredicted RBP12.05□□□□□ -0.48
PRDM16-203ENST00000378391 ASIPP42127 132 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 MPV17L2Q567V2 206 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 MESP1Q9BRJ9 268 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 EFNB3Q15768 340 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 PNRC2Q9NPJ4 139 aaKnown RBP12.04□□□□□ -0.48
PRDM16-203ENST00000378391 ERG28Q9UKR5 140 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 H7C1H1 209 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 CRYBA4P53673 196 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 RALGAPA1Q6GYQ0 2036 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 SAA2-SAA4A0A096LPE2 208 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 IGKV1-12A0A0C4DH73 117 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 M0R381 172 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 FOXH1O75593 365 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 IGKV1D-12P01611 117 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 AMBPP02760 352 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 SAA2P0DJI9 122 aaPredicted RBP12.04□□□□□ -0.48
PRDM16-203ENST00000378391 FBXL7Q9UJT9 491 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 CD69Q07108 199 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 FOXL1Q12952 345 aa12.04□□□□□ -0.48
PRDM16-203ENST00000378391 NOTCH4Q99466 2003 aa12.03□□□□□ -0.48
PRDM16-203ENST00000378391 FAM27E3Q08E93 113 aa12.03□□□□□ -0.48
PRDM16-203ENST00000378391 PPP1R27Q86WC6 154 aa12.03□□□□□ -0.48
PRDM16-203ENST00000378391 C1orf147Q96MC9 270 aaPredicted RBP12.03□□□□□ -0.48
PRDM16-203ENST00000378391 DUTP33316 252 aaKnown RBP12.03□□□□□ -0.48
PRDM16-203ENST00000378391 IGHV3OR16-13A0A075B7E8 117 aa12.03□□□□□ -0.48
PRDM16-203ENST00000378391 IGHV3-74A0A0B4J1X5 117 aa12.03□□□□□ -0.48
PRDM16-203ENST00000378391 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.03□□□□□ -0.48
PRDM16-203ENST00000378391 SP9P0CG40 484 aa12.03□□□□□ -0.48
PRDM16-203ENST00000378391 MRPL23Q16540 153 aaKnown RBP12.03□□□□□ -0.48
PRDM16-203ENST00000378391 CEACAM4O75871 244 aa12.03□□□□□ -0.48
PRDM16-203ENST00000378391 KIR3DL3Q8N743 410 aa12.03□□□□□ -0.48
PRDM16-203ENST00000378391 K7EP13 123 aa12.02□□□□□ -0.48
PRDM16-203ENST00000378391 CELA3BP08861 270 aa12.02□□□□□ -0.48
PRDM16-203ENST00000378391 PRCDQ00LT1 54 aa12.02□□□□□ -0.48
PRDM16-203ENST00000378391 PHLDA1Q8WV24 401 aaPredicted RBP12.02□□□□□ -0.48
PRDM16-203ENST00000378391 VSIRQ9H7M9 311 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms