RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 PAPPA-AS1Q5QFB9 102 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 CHCHD1Q96BP2 118 aaKnown RBP9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 LINC00271P0C7V0 271 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 OR5AN1Q8NGI8 311 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 ZNF585BQ52M93 769 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 TEX38Q6PEX7 206 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 TRAV8-4A0A0B4J246 113 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 SAMD5Q5TGI4 173 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 CACNG8Q8WXS5 425 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 A0A1B0GW64 132 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 HGFACQ04756 655 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 SPATA31B1PQ5VZV4 182 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 TMEM144Q7Z5S9 345 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 DPM2O94777 84 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 IGKCP01834 107 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 KLHL30-AS1Q8NEE0 82 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 LINC00312Q9Y6C7 94 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 YPEL1O60688 119 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 HBDP02042 147 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 YPEL2Q96QA6 119 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 ZMAT4Q9H898 229 aa9.94□□□□□ -0.82
PCDHA9-201ENST00000378122 DLEU1O43261 78 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 TIMP3P35625 211 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 C1orf194Q5T5A4 169 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 ARFGEF3Q5TH69 2177 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 PRSS33Q8NF86 280 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 FBLN5Q9UBX5 448 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 PPIFP30405 207 aaKnown RBP9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 CFAP161Q6P656 301 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 DPM3Q9P2X0 92 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 CHTOPQ9Y3Y2 248 aaKnown RBP9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 GZMBP10144 247 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 ANXA2RQ3ZCQ2 193 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 VWCEQ96DN2 955 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 PINLYPA6NC86 204 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 ID3Q02535 119 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 KLRD1Q13241 179 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 LCNL1Q6ZST4 164 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 FAM90A1Q86YD7 464 aa9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 NAA38Q9BRA0 125 aaKnown RBP9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 SPTBN1Q01082 2364 aaKnown RBP9.93□□□□□ -0.82
PCDHA9-201ENST00000378122 SIP14410 1827 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 SPTBN2O15020 2390 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 SUPT4H1P63272 117 aaKnown RBP9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 MESP1Q9BRJ9 268 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 TRBV24-1A0A075B6N3 115 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 FOXL1Q12952 345 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 OR10W1Q8NGF6 305 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 IGKV1-12A0A0C4DH73 117 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 EFEMP2O95967 443 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 IGKV1D-12P01611 117 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 ADCYAP1P18509 176 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 ZNF329Q86UD4 541 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 DMRTC2Q8IXT2 367 aaPredicted RBP9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 A0A0G2JLM5 398 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 C5orf24Q7Z6I8 188 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 IMMP1LQ96LU5 166 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 H7C1H1 209 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 PYY3Q5JQD4 70 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 SCN10AQ9Y5Y9 1956 aa9.92□□□□□ -0.82
PCDHA9-201ENST00000378122 IGKV1-27A0A075B6S5 117 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 H3BRM9 83 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 EREGO14944 169 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 RNF114Q9Y508 228 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 CDK2AP2O75956 126 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 TSKUQ8WUA8 353 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 MRPS18CQ9Y3D5 142 aaKnown RBP9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 SRSF1Q07955 248 aaKnown RBP eCLIP9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 TMEM256Q8N2U0 113 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 NXT2Q9NPJ8 142 aaKnown RBP9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 CACNA1EQ15878 2313 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 TRAV2A0A0B4J234 112 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 PAX2Q02962 417 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 hDV102S1A0JD36 115 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 MST1P26927 711 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 CKS1BP61024 79 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 HSD52Q0P140 79 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 ST20Q9HBF5 79 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 WDR90Q96KV7 1748 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 PAX1P15863 534 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 MRPL14Q6P1L8 145 aaKnown RBP9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 PSG8Q9UQ74 426 aa9.91□□□□□ -0.82
PCDHA9-201ENST00000378122 LINC01356Q8N9X3 169 aa9.9□□□□□ -0.82
PCDHA9-201ENST00000378122 CITED2Q99967 270 aaPredicted RBP9.9□□□□□ -0.82
PCDHA9-201ENST00000378122 WISP1O95388 367 aa9.9□□□□□ -0.82
PCDHA9-201ENST00000378122 DUTP33316 252 aaKnown RBP9.9□□□□□ -0.82
PCDHA9-201ENST00000378122 RNF144BQ7Z419 303 aa9.9□□□□□ -0.82
PCDHA9-201ENST00000378122 SPRR3Q9UBC9 169 aa9.9□□□□□ -0.82
PCDHA9-201ENST00000378122 NACAE9PAV3 2078 aa9.9□□□□□ -0.82
PCDHA9-201ENST00000378122 A0A1W2PRE2 83 aa9.9□□□□□ -0.82
PCDHA9-201ENST00000378122 NBR2O15453 112 aa9.9□□□□□ -0.82
PCDHA9-201ENST00000378122 CD7P09564 240 aa9.9□□□□□ -0.82
PCDHA9-201ENST00000378122 C20orf204Q6ZNR8 217 aa9.9□□□□□ -0.82
PCDHA9-201ENST00000378122 PRCDQ00LT1 54 aa9.9□□□□□ -0.83
PCDHA9-201ENST00000378122 TREML4Q6UXN2 200 aa9.9□□□□□ -0.83
PCDHA9-201ENST00000378122 MGST2Q99735 147 aa9.9□□□□□ -0.83
PCDHA9-201ENST00000378122 FABP5P3A8MUU1 101 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 SEC11AP67812 179 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 CACNA1DQ01668 2161 aa9.89□□□□□ -0.83
PCDHA9-201ENST00000378122 IGHV1-18A0A0C4DH31 117 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms