RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 KLK15Q9H2R5 256 aa16.08■□□□□ 0.16
PCDH8-202ENST00000377942 FOXA3P55318 350 aaPredicted RBP16.07■□□□□ 0.16
PCDH8-202ENST00000377942 SRSF4Q08170 494 aaKnown RBP16.07■□□□□ 0.16
PCDH8-202ENST00000377942 FNDC10F2Z333 226 aa16.07■□□□□ 0.16
PCDH8-202ENST00000377942 LGALS3P17931 250 aaKnown RBP16.07■□□□□ 0.16
PCDH8-202ENST00000377942 ZNF585BQ52M93 769 aa16.07■□□□□ 0.16
PCDH8-202ENST00000377942 USF3Q68DE3 2245 aa16.07■□□□□ 0.16
PCDH8-202ENST00000377942 ATP5LO75964 103 aa16.07■□□□□ 0.16
PCDH8-202ENST00000377942 ERASQ7Z444 233 aa16.07■□□□□ 0.16
PCDH8-202ENST00000377942 SAA4P35542 130 aa16.07■□□□□ 0.16
PCDH8-202ENST00000377942 SPATA45Q537H7 98 aa16.07■□□□□ 0.16
PCDH8-202ENST00000377942 TEX38Q6PEX7 206 aa16.06■□□□□ 0.16
PCDH8-202ENST00000377942 ORMDL3Q8N138 153 aa16.06■□□□□ 0.16
PCDH8-202ENST00000377942 TMEM101Q96IK0 257 aa16.06■□□□□ 0.16
PCDH8-202ENST00000377942 HEATR5AQ86XA9 2040 aa16.06■□□□□ 0.16
PCDH8-202ENST00000377942 TMEM183AQ8IXX5 376 aa16.06■□□□□ 0.16
PCDH8-202ENST00000377942 RNF138Q8WVD3 245 aa16.06■□□□□ 0.16
PCDH8-202ENST00000377942 HIGD1CA8MV81 97 aa16.06■□□□□ 0.16
PCDH8-202ENST00000377942 GCSAMLQ5JQS6 135 aa16.06■□□□□ 0.16
PCDH8-202ENST00000377942 C12orf54Q6X4T0 127 aa16.06■□□□□ 0.16
PCDH8-202ENST00000377942 FAM223BA6NKX1 122 aa16.05■□□□□ 0.16
PCDH8-202ENST00000377942 FAM223AQ8IWN6 122 aa16.05■□□□□ 0.16
PCDH8-202ENST00000377942 UQCR10Q9UDW1 63 aa16.05■□□□□ 0.16
PCDH8-202ENST00000377942 ERVK11-1P61568 191 aa16.05■□□□□ 0.16
PCDH8-202ENST00000377942 RAB37Q96AX2 223 aa16.05■□□□□ 0.16
PCDH8-202ENST00000377942 SLX1AQ9BQ83 275 aa16.05■□□□□ 0.16
PCDH8-202ENST00000377942 C5orf24Q7Z6I8 188 aa16.05■□□□□ 0.16
PCDH8-202ENST00000377942 CYTL1Q9NRR1 136 aa16.05■□□□□ 0.16
PCDH8-202ENST00000377942 CACNG7P62955 275 aa16.04■□□□□ 0.16
PCDH8-202ENST00000377942 PSMG4Q5JS54 123 aa16.04■□□□□ 0.16
PCDH8-202ENST00000377942 TEX36Q5VZQ5 186 aa16.04■□□□□ 0.16
PCDH8-202ENST00000377942 SLC25A34Q6PIV7 304 aa16.04■□□□□ 0.16
PCDH8-202ENST00000377942 SLC25A39Q9BZJ4 359 aaPredicted RBP16.04■□□□□ 0.16
PCDH8-202ENST00000377942 CD7P09564 240 aa16.04■□□□□ 0.16
PCDH8-202ENST00000377942 C1orf147Q96MC9 270 aaPredicted RBP16.04■□□□□ 0.16
PCDH8-202ENST00000377942 HS3ST6Q96QI5 342 aa16.04■□□□□ 0.16
PCDH8-202ENST00000377942 TRGV2A0A075B6R0 118 aa16.04■□□□□ 0.16
PCDH8-202ENST00000377942 COX6CP09669 75 aa16.04■□□□□ 0.16
PCDH8-202ENST00000377942 TRGV11A0A075B6L2 103 aa16.04■□□□□ 0.16
PCDH8-202ENST00000377942 MUC6Q6W4X9 2439 aa16.04■□□□□ 0.16
PCDH8-202ENST00000377942 J3QKU1 62 aa16.03■□□□□ 0.16
PCDH8-202ENST00000377942 MGST2Q99735 147 aa16.03■□□□□ 0.16
PCDH8-202ENST00000377942 ANAPC10Q9UM13 185 aa16.03■□□□□ 0.16
PCDH8-202ENST00000377942 NTF4P34130 210 aa16.03■□□□□ 0.16
PCDH8-202ENST00000377942 VSIRQ9H7M9 311 aa16.03■□□□□ 0.16
PCDH8-202ENST00000377942 C9orf139Q6ZV77 190 aa16.03■□□□□ 0.16
PCDH8-202ENST00000377942 ZNF414Q96IQ9 312 aa16.03■□□□□ 0.16
PCDH8-202ENST00000377942 PARD6GQ9BYG4 376 aaPredicted RBP16.03■□□□□ 0.16
PCDH8-202ENST00000377942 DOCK9Q9BZ29 2069 aa16.03■□□□□ 0.16
PCDH8-202ENST00000377942 APOHP02749 345 aaPredicted RBP16.02■□□□□ 0.16
PCDH8-202ENST00000377942 PMCHL2Q9BQD1 86 aa16.02■□□□□ 0.16
PCDH8-202ENST00000377942 TMEM262E9PQX1 116 aa16.02■□□□□ 0.16
PCDH8-202ENST00000377942 RSPO1Q2MKA7 263 aaPredicted RBP16.02■□□□□ 0.16
PCDH8-202ENST00000377942 ZNF562Q6V9R5 426 aa16.02■□□□□ 0.16
PCDH8-202ENST00000377942 KIAA2026Q5HYC2 2103 aa16.02■□□□□ 0.16
PCDH8-202ENST00000377942 A0A1B0GW64 132 aa16.02■□□□□ 0.15
PCDH8-202ENST00000377942 ZNF503-AS2A6NEH8 195 aa16.02■□□□□ 0.15
PCDH8-202ENST00000377942 RPLP1P05386 114 aaKnown RBP16.02■□□□□ 0.15
PCDH8-202ENST00000377942 GTSCR1Q86UQ5 136 aa16.02■□□□□ 0.15
PCDH8-202ENST00000377942 RNASE7Q9H1E1 156 aaKnown RBP16.02■□□□□ 0.15
PCDH8-202ENST00000377942 PCNX1Q96RV3 2341 aa16.02■□□□□ 0.15
PCDH8-202ENST00000377942 IGKV1-6A0A0C4DH72 117 aa16.02■□□□□ 0.15
PCDH8-202ENST00000377942 DKK1O94907 266 aa16.02■□□□□ 0.15
PCDH8-202ENST00000377942 RNASE2P10153 161 aaKnown RBP16.02■□□□□ 0.15
PCDH8-202ENST00000377942 COL5A1-AS1Q5SY13 56 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 TRAV5A0A0B4J249 113 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 C15orf62A8K5M9 175 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 PPBPP02775 128 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 NSUN5P1Q3KNT7 163 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 MUC21Q5SSG8 566 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 LINC00311Q8N616 119 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 OCC1Q8TAD7 63 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 GLMPQ8WWB7 406 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 PMS2P5A8MQ11 134 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 F2Z2F3 143 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 ZFHX2Q9C0A1 2572 aaPredicted RBP16.01■□□□□ 0.15
PCDH8-202ENST00000377942 C7orf71A4D174 169 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 LYL1P12980 280 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 Q5PR19 223 aa16.01■□□□□ 0.15
PCDH8-202ENST00000377942 WT1P19544 449 aaPredicted RBP16■□□□□ 0.15
PCDH8-202ENST00000377942 C11orf44Q8N8P7 122 aa16■□□□□ 0.15
PCDH8-202ENST00000377942 RNF223E7ERA6 249 aa16■□□□□ 0.15
PCDH8-202ENST00000377942 RPP25LQ8N5L8 163 aaKnown RBP16■□□□□ 0.15
PCDH8-202ENST00000377942 LRRK1Q38SD2 2015 aa16■□□□□ 0.15
PCDH8-202ENST00000377942 IGHV2-70DA0A0C4DH43 119 aa16■□□□□ 0.15
PCDH8-202ENST00000377942 OR11H12B2RN74 326 aa16■□□□□ 0.15
PCDH8-202ENST00000377942 KLF17Q5JT82 389 aaPredicted RBP16■□□□□ 0.15
PCDH8-202ENST00000377942 OR11H1Q8NG94 326 aa16■□□□□ 0.15
PCDH8-202ENST00000377942 OR11H2Q8NH07 326 aa16■□□□□ 0.15
PCDH8-202ENST00000377942 IGLV3-1P01715 115 aa16■□□□□ 0.15
PCDH8-202ENST00000377942 WDR86Q86TI4 376 aa16■□□□□ 0.15
PCDH8-202ENST00000377942 PIP4P2Q8N4L2 257 aa16■□□□□ 0.15
PCDH8-202ENST00000377942 IGKV1-16P04430 117 aa15.99■□□□□ 0.15
PCDH8-202ENST00000377942 SRD5A1P18405 259 aa15.99■□□□□ 0.15
PCDH8-202ENST00000377942 SUMO2P61956 95 aaKnown RBP15.99■□□□□ 0.15
PCDH8-202ENST00000377942 LYPD1Q8N2G4 141 aa15.99■□□□□ 0.15
PCDH8-202ENST00000377942 SCGB3A1Q96QR1 104 aa15.99■□□□□ 0.15
PCDH8-202ENST00000377942 IGHV1-69DA0A0B4J2H0 117 aa15.99■□□□□ 0.15
PCDH8-202ENST00000377942 IGHV1-69P01742 117 aa15.99■□□□□ 0.15
PCDH8-202ENST00000377942 LOXP28300 417 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms