RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 SUB1P53999 127 aaKnown RBP eCLIP9.74□□□□□ -0.85
CLCN6-205ENST00000376492 S100A10P60903 97 aa9.74□□□□□ -0.85
CLCN6-205ENST00000376492 VAMP2P63027 116 aa9.74□□□□□ -0.85
CLCN6-205ENST00000376492 BSXQ3C1V8 233 aa9.74□□□□□ -0.85
CLCN6-205ENST00000376492 TM4SF20Q53R12 229 aa9.74□□□□□ -0.85
CLCN6-205ENST00000376492 BTNL8Q6UX41 500 aa9.74□□□□□ -0.85
CLCN6-205ENST00000376492 WFDC3Q8IUB2 231 aa9.74□□□□□ -0.85
CLCN6-205ENST00000376492 KCNRGQ8N5I3 272 aa9.74□□□□□ -0.85
CLCN6-205ENST00000376492 DTD1Q8TEA8 209 aa9.74□□□□□ -0.85
CLCN6-205ENST00000376492 MISP3Q96FF7 219 aa9.74□□□□□ -0.85
CLCN6-205ENST00000376492 TXN2Q99757 166 aa9.74□□□□□ -0.85
CLCN6-205ENST00000376492 MFFQ9GZY8 342 aa9.74□□□□□ -0.85
CLCN6-205ENST00000376492 ENY2Q9NPA8 101 aa9.74□□□□□ -0.85
CLCN6-205ENST00000376492 KLK5Q9Y337 293 aaPredicted RBP9.74□□□□□ -0.85
CLCN6-205ENST00000376492 FXYD6-FXYD2A0A087WZ82 144 aa9.73□□□□□ -0.85
CLCN6-205ENST00000376492 ZNF320A2RRD8 509 aa9.73□□□□□ -0.85
CLCN6-205ENST00000376492 A8MWP6 167 aa9.73□□□□□ -0.85
CLCN6-205ENST00000376492 BOLA2-SMG1P6H3BVE0 249 aa9.73□□□□□ -0.85
CLCN6-205ENST00000376492 SPRY2O43597 315 aa9.73□□□□□ -0.85
CLCN6-205ENST00000376492 MT-CO2P00403 227 aa9.73□□□□□ -0.85
CLCN6-205ENST00000376492 CTSGP08311 255 aa9.73□□□□□ -0.85
CLCN6-205ENST00000376492 S100A11P31949 105 aa9.73□□□□□ -0.85
CLCN6-205ENST00000376492 HOXA1P49639 335 aaPredicted RBP9.73□□□□□ -0.85
CLCN6-205ENST00000376492 MFAP4P55083 255 aa9.73□□□□□ -0.85
CLCN6-205ENST00000376492 POLR2GP62487 172 aaKnown RBP eCLIP9.73□□□□□ -0.85
CLCN6-205ENST00000376492 LRRC37A5PQ49AS3 106 aa9.73□□□□□ -0.85
CLCN6-205ENST00000376492 C9orf62Q8N4C0 152 aa9.73□□□□□ -0.85
CLCN6-205ENST00000376492 LSM5Q9Y4Y9 91 aaKnown RBP9.73□□□□□ -0.85
CLCN6-205ENST00000376492 RNF222A6NCQ9 220 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 CORTO00230 105 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 SCGB1D2O95969 90 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 C8orf88P0DMB2 117 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 RPL12P30050 165 aaKnown RBP9.72□□□□□ -0.85
CLCN6-205ENST00000376492 BMI1P35226 326 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 ADMP35318 185 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 HTR2BP41595 481 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 ELLP55199 621 aaPredicted RBP9.72□□□□□ -0.85
CLCN6-205ENST00000376492 PAX9P55771 341 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 EIF5AP63241 154 aaKnown RBP9.72□□□□□ -0.85
CLCN6-205ENST00000376492 LGALSLQ3ZCW2 172 aaPredicted RBP9.72□□□□□ -0.85
CLCN6-205ENST00000376492 Q56UQ5 140 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 TMEM14EPQ6UXP3 125 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 UNQ9165/PRO28630Q6UXU0 137 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 STX12Q86Y82 276 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 GATAD1Q8WUU5 269 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 CHRDL1Q9BU40 450 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 GGACTQ9BVM4 153 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 RBKSQ9H477 322 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 OR5AC2Q9NZP5 309 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 UBQLN2Q9UHD9 624 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 TP53TG1Q9Y2A0 90 aa9.72□□□□□ -0.85
CLCN6-205ENST00000376492 IGHV3-35A0A0C4DH35 117 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 FNDC10F2Z333 226 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 SMLR1H3BR10 107 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 NDUFA4O00483 81 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 ARPC5O15511 151 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 SSSCA1O60232 199 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 SULT1A1P50225 295 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 HBG1P69891 147 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 HBG2P69892 147 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 PRR20EP86478 221 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 PRR20CP86479 221 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 PRR20DP86480 221 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 PRR20BP86481 221 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 PRR20AP86496 221 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 ATP6V1FQ16864 119 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 C2orf83Q53S99 150 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 LGALS9CQ6DKI2 356 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 LAMTOR1Q6IAA8 161 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 Q6ZWC4 215 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 TMEM252Q8N6L7 170 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 UBAC2Q8NBM4 344 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 PHLDA1Q8WV24 401 aaPredicted RBP9.71□□□□□ -0.86
CLCN6-205ENST00000376492 MARC2Q969Z3 335 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 PINX1Q96BK5 328 aaKnown RBP9.71□□□□□ -0.86
CLCN6-205ENST00000376492 HEYLQ9NQ87 328 aaPredicted RBP9.71□□□□□ -0.86
CLCN6-205ENST00000376492 PSENENQ9NZ42 101 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 UFC1Q9Y3C8 167 aa9.71□□□□□ -0.86
CLCN6-205ENST00000376492 STRAPQ9Y3F4 350 aaKnown RBP9.71□□□□□ -0.86
CLCN6-205ENST00000376492 CEBPZOSA8MTT3 80 aa9.7□□□□□ -0.86
CLCN6-205ENST00000376492 K7EMT4 169 aa9.7□□□□□ -0.86
CLCN6-205ENST00000376492 NUPL2O15504 423 aaKnown RBP9.7□□□□□ -0.86
CLCN6-205ENST00000376492 DFFBO76075 338 aa9.7□□□□□ -0.86
CLCN6-205ENST00000376492 ATF4P18848 351 aaPredicted RBP9.7□□□□□ -0.86
CLCN6-205ENST00000376492 NPBWR1P48145 328 aa9.7□□□□□ -0.86
CLCN6-205ENST00000376492 AP2S1P53680 142 aaPredicted RBP9.7□□□□□ -0.86
CLCN6-205ENST00000376492 APOC4P55056 127 aa9.7□□□□□ -0.86
CLCN6-205ENST00000376492 RAB11AP62491 216 aa9.7□□□□□ -0.86
CLCN6-205ENST00000376492 SLC51BQ86UW2 128 aa9.7□□□□□ -0.86
CLCN6-205ENST00000376492 TMEM190Q8WZ59 177 aa9.7□□□□□ -0.86
CLCN6-205ENST00000376492 ZNF414Q96IQ9 312 aa9.7□□□□□ -0.86
CLCN6-205ENST00000376492 PARD6GQ9BYG4 376 aaPredicted RBP9.7□□□□□ -0.86
CLCN6-205ENST00000376492 MRPL27Q9P0M9 148 aaKnown RBP9.7□□□□□ -0.86
CLCN6-205ENST00000376492 HSPB11Q9Y547 144 aa9.7□□□□□ -0.86
CLCN6-205ENST00000376492 KANTRA0A1W2PQU2 76 aa9.69□□□□□ -0.86
CLCN6-205ENST00000376492 TMEM50AO95807 157 aa9.69□□□□□ -0.86
CLCN6-205ENST00000376492 IGHV3-48P01763 117 aa9.69□□□□□ -0.86
CLCN6-205ENST00000376492 CXCL2P19875 107 aa9.69□□□□□ -0.86
CLCN6-205ENST00000376492 CAV2P51636 162 aa9.69□□□□□ -0.86
CLCN6-205ENST00000376492 RELQ04864 619 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms