RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 TRAV3A0A0B4J244 114 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 FCN3O75636 299 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 CCL20P78556 96 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 Q8TAT8 98 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 SCN5AQ14524 2016 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 TMEM8BA6NDV4 472 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 LINC00518Q8N0U6 118 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 NYNRINQ9P2P1 1898 aaKnown RBP12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 RNF222A6NCQ9 220 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 HOXD3P31249 432 aaPredicted RBP12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 S100A7L2Q5SY68 101 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 CST9LQ9H4G1 147 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 NRN1Q9NPD7 142 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 DOCK4Q8N1I0 1966 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 PCP4P48539 62 aa12.15□□□□□ -0.46
NOTCH4-201ENST00000375023 RCHY1Q96PM5 261 aa12.15□□□□□ -0.46
NOTCH4-201ENST00000375023 DERL1Q9BUN8 251 aa12.15□□□□□ -0.46
NOTCH4-201ENST00000375023 IGHV2-26A0A0B4J1V2 119 aa12.15□□□□□ -0.46
NOTCH4-201ENST00000375023 TRAV41A0A0B4J266 112 aa12.15□□□□□ -0.46
NOTCH4-201ENST00000375023 LINC01356Q8N9X3 169 aa12.15□□□□□ -0.46
NOTCH4-201ENST00000375023 ZNF625Q96I27 306 aaPredicted RBP12.15□□□□□ -0.46
NOTCH4-201ENST00000375023 LINC00477Q96M19 166 aa12.15□□□□□ -0.46
NOTCH4-201ENST00000375023 TRBV6-7A0A0A0MS04 114 aa12.15□□□□□ -0.46
NOTCH4-201ENST00000375023 ARID2Q68CP9 1835 aa12.15□□□□□ -0.46
NOTCH4-201ENST00000375023 OCC1Q8TAD7 63 aa12.15□□□□□ -0.46
NOTCH4-201ENST00000375023 RNF126Q9BV68 326 aa12.15□□□□□ -0.46
NOTCH4-201ENST00000375023 SLC25A15Q9Y619 301 aa12.15□□□□□ -0.46
NOTCH4-201ENST00000375023 KLHDC3Q9BQ90 382 aa12.15□□□□□ -0.47
NOTCH4-201ENST00000375023 ZNRD1Q9P1U0 126 aa12.15□□□□□ -0.47
NOTCH4-201ENST00000375023 C5orf63A6NC05 138 aa12.14□□□□□ -0.47
NOTCH4-201ENST00000375023 YPEL1O60688 119 aa12.14□□□□□ -0.47
NOTCH4-201ENST00000375023 NAPSAO96009 420 aa12.14□□□□□ -0.47
NOTCH4-201ENST00000375023 TCRAP04437 139 aa12.14□□□□□ -0.47
NOTCH4-201ENST00000375023 RNF182Q8N6D2 247 aa12.14□□□□□ -0.47
NOTCH4-201ENST00000375023 YPEL2Q96QA6 119 aa12.14□□□□□ -0.47
NOTCH4-201ENST00000375023 MCRIP2Q9BUT9 160 aaKnown RBP12.14□□□□□ -0.47
NOTCH4-201ENST00000375023 EFNB3Q15768 340 aa12.14□□□□□ -0.47
NOTCH4-201ENST00000375023 ABCA4P78363 2273 aa12.14□□□□□ -0.47
NOTCH4-201ENST00000375023 CKS1BP61024 79 aa12.14□□□□□ -0.47
NOTCH4-201ENST00000375023 FAM90A1Q86YD7 464 aa12.14□□□□□ -0.47
NOTCH4-201ENST00000375023 ZNF581Q9P0T4 197 aa12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 DMRT1Q9Y5R6 373 aa12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 ZDBF2Q9HCK1 2354 aa12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 INTS1Q8N201 2190 aaKnown RBP12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 A6NNC1 897 aa12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 BPESC1Q9GZL8 116 aa12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 KIF26BQ2KJY2 2108 aa12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 SRSF1Q07955 248 aaKnown RBP eCLIP12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 SAMD13Q5VXD3 122 aa12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 TMEM144Q7Z5S9 345 aa12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 NIT1Q86X76 327 aa12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 A0A0G2JNJ9 132 aa12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 IGFBP3P17936 291 aaPredicted RBP12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 HGFACQ04756 655 aa12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 DLX4Q92988 240 aaPredicted RBP12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 Q9UFV3 132 aa12.13□□□□□ -0.47
NOTCH4-201ENST00000375023 E9PLN8 166 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 F8VVB4 439 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 F8VWA3 439 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 INS-IGF2F8WCM5 200 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 INSP01308 110 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 DSCR9P59020 149 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 MBNL3Q9NUK0 354 aaKnown RBP12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 DOCK6Q96HP0 2047 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 MED12Q93074 2177 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 RNF144BQ7Z419 303 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 TAF1LQ8IZX4 1826 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 DUTP33316 252 aaKnown RBP12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 LINC00114Q6XXX2 140 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 CACNG8Q8WXS5 425 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 IGKV1-12A0A0C4DH73 117 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 SMKR1H3BMG3 65 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 PSPNO60542 156 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 IGKV1D-12P01611 117 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 ZNF883P0CG24 379 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 CLDN16Q9Y5I7 305 aa12.12□□□□□ -0.47
NOTCH4-201ENST00000375023 ZNF362Q5T0B9 420 aaPredicted RBP12.11□□□□□ -0.47
NOTCH4-201ENST00000375023 A0A087WWL8 130 aa12.11□□□□□ -0.47
NOTCH4-201ENST00000375023 B4DSR2 109 aa12.11□□□□□ -0.47
NOTCH4-201ENST00000375023 FANCMQ8IYD8 2048 aa12.11□□□□□ -0.47
NOTCH4-201ENST00000375023 CCL1P22362 96 aa12.11□□□□□ -0.47
NOTCH4-201ENST00000375023 LYPD2Q6UXB3 125 aa12.11□□□□□ -0.47
NOTCH4-201ENST00000375023 BMPERQ8N8U9 685 aa12.11□□□□□ -0.47
NOTCH4-201ENST00000375023 SRRM4A7MD48 611 aaKnown RBP12.11□□□□□ -0.47
NOTCH4-201ENST00000375023 ZNF876PQ49A33 203 aa12.11□□□□□ -0.47
NOTCH4-201ENST00000375023 DPM2O94777 84 aa12.11□□□□□ -0.47
NOTCH4-201ENST00000375023 COL8A2P25067 703 aa12.11□□□□□ -0.47
NOTCH4-201ENST00000375023 TMEM155Q4W5P6 130 aa12.11□□□□□ -0.47
NOTCH4-201ENST00000375023 CD177Q8N6Q3 437 aa12.11□□□□□ -0.47
NOTCH4-201ENST00000375023 PSG1P11464 419 aa12.1□□□□□ -0.47
NOTCH4-201ENST00000375023 TIMP3P35625 211 aa12.1□□□□□ -0.47
NOTCH4-201ENST00000375023 ERCC8Q13216 396 aa12.1□□□□□ -0.47
NOTCH4-201ENST00000375023 GSN-AS1Q9NRJ2 163 aa12.1□□□□□ -0.47
NOTCH4-201ENST00000375023 DKK4Q9UBT3 224 aa12.1□□□□□ -0.47
NOTCH4-201ENST00000375023 CYSLTR1Q9Y271 337 aa12.1□□□□□ -0.47
NOTCH4-201ENST00000375023 NRXN2Q9P2S2 1712 aa12.1□□□□□ -0.47
NOTCH4-201ENST00000375023 EFNA2O43921 213 aa12.1□□□□□ -0.47
NOTCH4-201ENST00000375023 PVRIGQ6DKI7 326 aa12.1□□□□□ -0.47
NOTCH4-201ENST00000375023 LOC102723996A0A087X1L8 192 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms