RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 RD3LP0DJH9 198 aa13.29□□□□□ -0.28
HLA-DMA-201ENST00000374843 GATA2P23769 480 aaPredicted RBP13.29□□□□□ -0.28
HLA-DMA-201ENST00000374843 CDX1P47902 265 aaPredicted RBP13.29□□□□□ -0.28
HLA-DMA-201ENST00000374843 RAB2AP61019 212 aa13.29□□□□□ -0.28
HLA-DMA-201ENST00000374843 ZNF600Q6ZNG1 722 aa13.29□□□□□ -0.28
HLA-DMA-201ENST00000374843 VSIRQ9H7M9 311 aa13.29□□□□□ -0.28
HLA-DMA-201ENST00000374843 RPRMQ9NS64 109 aa13.29□□□□□ -0.28
HLA-DMA-201ENST00000374843 TRBV12-3P01733 135 aa13.28□□□□□ -0.28
HLA-DMA-201ENST00000374843 NMBP08949 121 aa13.28□□□□□ -0.28
HLA-DMA-201ENST00000374843 ARL3P36405 182 aa13.28□□□□□ -0.28
HLA-DMA-201ENST00000374843 RELQ04864 619 aaPredicted RBP13.28□□□□□ -0.28
HLA-DMA-201ENST00000374843 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.28□□□□□ -0.28
HLA-DMA-201ENST00000374843 OR51G1Q8NGK1 321 aa13.28□□□□□ -0.28
HLA-DMA-201ENST00000374843 SAT2Q96F10 170 aaPredicted RBP13.28□□□□□ -0.28
HLA-DMA-201ENST00000374843 C19orf24Q9BVV8 132 aa13.28□□□□□ -0.28
HLA-DMA-201ENST00000374843 WI2-2373I1.2A0A1W2PRP0 233 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 PPP5D1E7EU14 171 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 BMPR1BO00238 502 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 OR5G3P0C626 314 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 GCSAMLQ5JQS6 135 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 CLLU1Q5K131 121 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 Q6ZRG5 221 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 RPP25LQ8N5L8 163 aaKnown RBP13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 OR10G4Q8NGN3 311 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 OR10G9Q8NGN4 311 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 OR10G7Q8NGN6 311 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 Q8WTZ3 238 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 GATAD1Q8WUU5 269 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 C4orf3Q8WVX3 66 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 RCC1LQ96I51 464 aaKnown RBP13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 PFDN5Q99471 154 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 ZFAND3Q9H8U3 227 aa13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 PEF1Q9UBV8 284 aaKnown RBP13.27□□□□□ -0.29
HLA-DMA-201ENST00000374843 ELOA3CA0A087WX78 387 aaPredicted RBP13.26□□□□□ -0.29
HLA-DMA-201ENST00000374843 ZNF705EA8MWA4 302 aaPredicted RBP13.26□□□□□ -0.29
HLA-DMA-201ENST00000374843 I3L521 148 aa13.26□□□□□ -0.29
HLA-DMA-201ENST00000374843 FHITP49789 147 aa13.26□□□□□ -0.29
HLA-DMA-201ENST00000374843 ZNF726P1Q15940 193 aa13.26□□□□□ -0.29
HLA-DMA-201ENST00000374843 OR1L4Q8NGR5 311 aa13.26□□□□□ -0.29
HLA-DMA-201ENST00000374843 FAM213BQ8TBF2 198 aa13.26□□□□□ -0.29
HLA-DMA-201ENST00000374843 RNF125Q96EQ8 232 aa13.26□□□□□ -0.29
HLA-DMA-201ENST00000374843 RNF2Q99496 336 aa13.26□□□□□ -0.29
HLA-DMA-201ENST00000374843 COX7A2P2O60397 106 aa13.25□□□□□ -0.29
HLA-DMA-201ENST00000374843 GGCTO75223 188 aaKnown RBP13.25□□□□□ -0.29
HLA-DMA-201ENST00000374843 HYPMO75409 117 aa13.25□□□□□ -0.29
HLA-DMA-201ENST00000374843 CD28P10747 220 aa13.25□□□□□ -0.29
HLA-DMA-201ENST00000374843 FOXL1Q12952 345 aa13.25□□□□□ -0.29
HLA-DMA-201ENST00000374843 PATE2Q6UY27 113 aa13.25□□□□□ -0.29
HLA-DMA-201ENST00000374843 TMEM37Q8WXS4 190 aa13.25□□□□□ -0.29
HLA-DMA-201ENST00000374843 MRPL32Q9BYC8 188 aaKnown RBP13.25□□□□□ -0.29
HLA-DMA-201ENST00000374843 PUS1Q9Y606 427 aaKnown RBP eCLIP13.25□□□□□ -0.29
HLA-DMA-201ENST00000374843 CTXND1A0A1B0GTU2 59 aa13.24□□□□□ -0.29
HLA-DMA-201ENST00000374843 NDUFA4O00483 81 aa13.24□□□□□ -0.29
HLA-DMA-201ENST00000374843 IL4P05112 153 aa13.24□□□□□ -0.29
HLA-DMA-201ENST00000374843 CDC34P49427 236 aaPredicted RBP13.24□□□□□ -0.29
HLA-DMA-201ENST00000374843 LYZP61626 148 aa13.24□□□□□ -0.29
HLA-DMA-201ENST00000374843 RHOBP62745 196 aa13.24□□□□□ -0.29
HLA-DMA-201ENST00000374843 BLOC1S1P78537 153 aa13.24□□□□□ -0.29
HLA-DMA-201ENST00000374843 TOMM20LQ6UXN7 152 aa13.24□□□□□ -0.29
HLA-DMA-201ENST00000374843 MBD3L1Q8WWY6 194 aa13.24□□□□□ -0.29
HLA-DMA-201ENST00000374843 ACTR3CQ9C0K3 210 aaPredicted RBP13.24□□□□□ -0.29
HLA-DMA-201ENST00000374843 DNAJC4Q9NNZ3 241 aa13.24□□□□□ -0.29
HLA-DMA-201ENST00000374843 MRPL27Q9P0M9 148 aaKnown RBP13.24□□□□□ -0.29
HLA-DMA-201ENST00000374843 TRAV1-1A0A0B4J248 108 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 ANKRD34BA5PLL1 514 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 RAB14P61106 215 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 USF2Q15853 346 aaPredicted RBP13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 C10orf113Q5VZT2 155 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 FAM122CQ6P4D5 195 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 SSX7Q7RTT5 188 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 OR1B1Q8NGR6 318 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 LYPD6BQ8NI32 183 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 TMEM190Q8WZ59 177 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 OR5B12Q96R08 314 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 SLC25A22Q9H936 323 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 DOK5Q9P104 306 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 FUT9Q9Y231 359 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 HIGD1AQ9Y241 93 aa13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 TSSC4Q9Y5U2 329 aaPredicted RBP13.23□□□□□ -0.29
HLA-DMA-201ENST00000374843 JMJD1CQ15652 2540 aa13.22□□□□□ -0.29
HLA-DMA-201ENST00000374843 HAX1O00165 279 aa13.22□□□□□ -0.29
HLA-DMA-201ENST00000374843 HSPB1P04792 205 aaKnown RBP13.22□□□□□ -0.29
HLA-DMA-201ENST00000374843 ORM2P19652 201 aa13.22□□□□□ -0.29
HLA-DMA-201ENST00000374843 C18orf65Q6ZTR6 163 aa13.22□□□□□ -0.29
HLA-DMA-201ENST00000374843 PRIMA1Q86XR5 153 aa13.22□□□□□ -0.29
HLA-DMA-201ENST00000374843 GPHB5Q86YW7 130 aa13.22□□□□□ -0.29
HLA-DMA-201ENST00000374843 RAB24Q969Q5 203 aa13.22□□□□□ -0.29
HLA-DMA-201ENST00000374843 CITED2Q99967 270 aaPredicted RBP13.22□□□□□ -0.29
HLA-DMA-201ENST00000374843 SEPSECSQ9HD40 501 aaKnown RBP13.22□□□□□ -0.29
HLA-DMA-201ENST00000374843 IGHV4OR15-8A0A075B7B6 117 aa13.21□□□□□ -0.29
HLA-DMA-201ENST00000374843 A0A087WW49 117 aa13.21□□□□□ -0.29
HLA-DMA-201ENST00000374843 MAP1LC3B2A6NCE7 125 aa13.21□□□□□ -0.29
HLA-DMA-201ENST00000374843 H3BRN7 92 aa13.21□□□□□ -0.29
HLA-DMA-201ENST00000374843 KRTAP10-3P60369 221 aa13.21□□□□□ -0.29
HLA-DMA-201ENST00000374843 KHDC1LQ5JSQ8 128 aa13.21□□□□□ -0.29
HLA-DMA-201ENST00000374843 FAM78BQ5VT40 261 aa13.21□□□□□ -0.29
HLA-DMA-201ENST00000374843 SPATA31B1PQ5VZV4 182 aa13.21□□□□□ -0.29
HLA-DMA-201ENST00000374843 KLHL30-AS1Q8NEE0 82 aa13.21□□□□□ -0.29
HLA-DMA-201ENST00000374843 SHANK2-AS3Q9BTD1 123 aa13.21□□□□□ -0.29
HLA-DMA-201ENST00000374843 PBDC1Q9BVG4 233 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms