RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 C8orf46Q8TAG6 207 aa11.18□□□□□ -0.62
HMGCL-203ENST00000374490 WIPF2Q8TF74 440 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-203ENST00000374490 FXYD5Q96DB9 178 aa11.18□□□□□ -0.62
HMGCL-203ENST00000374490 GRAMD2BQ96HH9 432 aa11.18□□□□□ -0.62
HMGCL-203ENST00000374490 NAT8BQ9UHF3 227 aa11.18□□□□□ -0.62
HMGCL-203ENST00000374490 GRIFINA4D1Z8 144 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 IGLV1-47P01700 117 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 GRNP28799 593 aaKnown RBP11.17□□□□□ -0.62
HMGCL-203ENST00000374490 TNXAQ16473 311 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 C1orf194Q5T5A4 169 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 LINC00305Q7Z4B0 112 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 MISP3Q96FF7 219 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 SERTAD4Q9NUC0 356 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 TP53TG3Q9ULZ0 132 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 SIGLEC9Q9Y336 463 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 INSIG2Q9Y5U4 225 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 IGHV1-3A0A0C4DH29 117 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 KIR2DL5BA0A0G2JN68 375 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 KIR2DL5BA0A0G2JPC4 375 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 HYPMO75409 117 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 SERF1AO75920 110 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 PYYP10082 97 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 BRS3P32247 399 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 MYCNOSP40205 109 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 TMEM183BQ1AE95 376 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 KIR2DL5AQ8N109 375 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 C2orf88Q9BSF0 95 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 ZNF331Q9NQX6 463 aaPredicted RBP11.17□□□□□ -0.62
HMGCL-203ENST00000374490 TPSG1Q9NRR2 321 aa11.17□□□□□ -0.62
HMGCL-203ENST00000374490 BUB1B-PAK6H3BSN5 160 aa11.16□□□□□ -0.62
HMGCL-203ENST00000374490 NUPR1O60356 82 aa11.16□□□□□ -0.62
HMGCL-203ENST00000374490 HIST1H1EP10412 219 aaKnown RBP11.16□□□□□ -0.62
HMGCL-203ENST00000374490 UBE2G1P62253 170 aa11.16□□□□□ -0.62
HMGCL-203ENST00000374490 FXYD3Q14802 87 aa11.16□□□□□ -0.62
HMGCL-203ENST00000374490 USF2Q15853 346 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-203ENST00000374490 ITLN2Q8WWU7 325 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-203ENST00000374490 MBD6Q96DN6 1003 aa11.16□□□□□ -0.62
HMGCL-203ENST00000374490 SAMD10Q9BYL1 202 aa11.16□□□□□ -0.62
HMGCL-203ENST00000374490 F11RQ9Y624 299 aaKnown RBP11.16□□□□□ -0.62
HMGCL-203ENST00000374490 ITPR2Q14571 2701 aa11.15□□□□□ -0.62
HMGCL-203ENST00000374490 A0A1B0GUS0 222 aa11.15□□□□□ -0.62
HMGCL-203ENST00000374490 ZNF705FA8MVS1 300 aaPredicted RBP11.15□□□□□ -0.62
HMGCL-203ENST00000374490 C22orf46C9J442 243 aa11.15□□□□□ -0.62
HMGCL-203ENST00000374490 ZNF705DP0CH99 300 aaPredicted RBP11.15□□□□□ -0.62
HMGCL-203ENST00000374490 ZNF705BP0CI00 300 aaPredicted RBP11.15□□□□□ -0.62
HMGCL-203ENST00000374490 COL8A2P25067 703 aa11.15□□□□□ -0.62
HMGCL-203ENST00000374490 LINC00310P59036 64 aa11.15□□□□□ -0.62
HMGCL-203ENST00000374490 CDSNQ15517 529 aa11.15□□□□□ -0.62
HMGCL-203ENST00000374490 OR8B3Q8NGG8 313 aa11.15□□□□□ -0.62
HMGCL-203ENST00000374490 OR1B1Q8NGR6 318 aa11.15□□□□□ -0.62
HMGCL-203ENST00000374490 RPEQ96AT9 228 aa11.15□□□□□ -0.62
HMGCL-203ENST00000374490 RBM14Q96PK6 669 aaKnown RBP11.15□□□□□ -0.62
HMGCL-203ENST00000374490 OR8B2Q96RD0 313 aa11.15□□□□□ -0.62
HMGCL-203ENST00000374490 MRPL36Q9P0J6 103 aaKnown RBP11.15□□□□□ -0.62
HMGCL-203ENST00000374490 EPDR1Q9UM22 224 aa11.15□□□□□ -0.62
HMGCL-203ENST00000374490 IGHV3-72A0A0B4J1Y9 119 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 PPIAL4CA0A0B4J2A2 164 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 REG1AP05451 166 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 PPIAL4GP0DN37 164 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 COX6B1P14854 86 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 SSTP61278 116 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 HCP5Q6MZN7 132 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 ZNF841Q6ZN19 808 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 MRPL52Q86TS9 123 aaKnown RBP11.14□□□□□ -0.63
HMGCL-203ENST00000374490 PPP1R27Q86WC6 154 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 MUC15Q8N387 334 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 SIGLECL1Q8N7X8 197 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 RITA1Q96K30 269 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 ZNF586Q9NXT0 402 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 POLR3KQ9Y2Y1 108 aaPredicted RBP11.14□□□□□ -0.63
HMGCL-203ENST00000374490 KLF12Q9Y4X4 402 aa11.14□□□□□ -0.63
HMGCL-203ENST00000374490 MOSP00540 346 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 APCSP02743 223 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 SLC25A5P05141 298 aaKnown RBP11.13□□□□□ -0.63
HMGCL-203ENST00000374490 ORM2P19652 201 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 TCL1AP56279 114 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 RIPPLY3P57055 190 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 Q6ZWC4 215 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 ATP5L2Q7Z4Y8 100 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 C5orf17Q8NAS9 161 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 FMC1Q96HJ9 113 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 KCNS1Q96KK3 526 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 TBX15Q96SF7 602 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 HSPB9Q9BQS6 159 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 ATG101Q9BSB4 218 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 GNB4Q9HAV0 340 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 ABCA12Q86UK0 2595 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 TEX22C9J3V5 150 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 NBEAP1P0C6P0 100 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 MFAP2P55001 183 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 ZNF672Q499Z4 452 aaPredicted RBP11.13□□□□□ -0.63
HMGCL-203ENST00000374490 CT83Q5H943 113 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 MRPL54Q6P161 138 aaKnown RBP11.13□□□□□ -0.63
HMGCL-203ENST00000374490 TEX43Q6ZNM6 134 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 TSKUQ8WUA8 353 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 MRPL27Q9P0M9 148 aaKnown RBP11.13□□□□□ -0.63
HMGCL-203ENST00000374490 TMEM14CQ9P0S9 112 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 ZNF492Q9P255 531 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 HIGD1AQ9Y241 93 aa11.13□□□□□ -0.63
HMGCL-203ENST00000374490 YLPM1P49750 1951 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms